Molecular pathology : MP最新文献

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Pathology: The Clinical Description of Human Disease 病理学:人类疾病的临床描述
Molecular pathology : MP Pub Date : 2009-12-31 DOI: 10.1016/B978-0-12-374419-7.00011-1
W. Funkhouser
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引用次数: 10
Molecular Basis of Pulmonary Disease 肺部疾病的分子基础
Molecular pathology : MP Pub Date : 2009-12-31 DOI: 10.1016/B978-0-12-374419-7.00018-4
C. Farver, D. Zander
{"title":"Molecular Basis of Pulmonary Disease","authors":"C. Farver, D. Zander","doi":"10.1016/B978-0-12-374419-7.00018-4","DOIUrl":"https://doi.org/10.1016/B978-0-12-374419-7.00018-4","url":null,"abstract":"","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"1 1","pages":"305 - 364"},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/B978-0-12-374419-7.00018-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54051799","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Laminin 5 gamma 2 chain expression: a marker of early invasiveness in colorectal adenomas. 层粘连蛋白5 - γ - 2链表达:结直肠腺瘤早期侵袭性的标志。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.342
C Lenander, U J Roblick, J K Habermann, A Ost, K Tryggvason, G Auer
{"title":"Laminin 5 gamma 2 chain expression: a marker of early invasiveness in colorectal adenomas.","authors":"C Lenander,&nbsp;U J Roblick,&nbsp;J K Habermann,&nbsp;A Ost,&nbsp;K Tryggvason,&nbsp;G Auer","doi":"10.1136/mp.56.6.342","DOIUrl":"https://doi.org/10.1136/mp.56.6.342","url":null,"abstract":"<p><strong>Aim: </strong>Polyps of the colon and rectum are considered to be premalignant lesions in the development of colorectal cancer. However, knowledge of how normal epithelial cells gain invasive properties is limited. Laminin 5 gamma 2 chain expression was investigated to determine the role of laminin 5 as a marker of potential invasiveness in colorectal polyps.</p><p><strong>Material/methods: </strong>Sixty seven polyps of different types (15 hyperplastic polyps, 12 serrated adenomas, 16 tubular adenomas, and 24 adenomas with a villous component) were assessed for gamma 2 chain expression of laminin 5 by immunohistochemistry on archival, paraffin wax embedded sections.</p><p><strong>Results: </strong>Ten polyps stained positive and the number of polyps expressing the laminin 5 gamma 2 chain increased significantly as the phenotype of the adenomas became more atypical: none of the 15 hyperplastic polyps, two of the 16 tubular adenomas (12.5%), and six of the 24 adenomas with a villous component (25%) were positive. Two of 12 (17%) serrated adenomas, regarded as a distinct form of colorectal neoplasia, showed gamma 2 chain expression. Furthermore, laminin 5 gamma 2 chain expression correlated with lesion size. Polyps smaller than 10 mm expressed the gamma 2 chain less frequently than did those equal to or larger than 10 mm.</p><p><strong>Conclusion: </strong>Laminin 5 gamma 2 chain expression was found to increase progressively towards a more atypical phenotype of adenoma. The results suggest that, in the future, laminin 5 gamma 2 chain expression may be used as an indicator of incipient malignant transformation of a benign colorectal adenoma.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"342-6"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.342","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099121","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 15
Tempero-spatial dissociation between the expression of Fas and apoptosis after coronary occlusion. 冠脉闭塞后Fas表达与细胞凋亡的时空分离。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.362
Q Z Feng, T D Li, L X Wei, X Qiao, J Yi, L Wang, T S Yang
{"title":"Tempero-spatial dissociation between the expression of Fas and apoptosis after coronary occlusion.","authors":"Q Z Feng,&nbsp;T D Li,&nbsp;L X Wei,&nbsp;X Qiao,&nbsp;J Yi,&nbsp;L Wang,&nbsp;T S Yang","doi":"10.1136/mp.56.6.362","DOIUrl":"https://doi.org/10.1136/mp.56.6.362","url":null,"abstract":"<p><strong>Aims: </strong>To explore the role of Fas in cardiomyocytic apoptosis induced by ischaemia through determining the histological relation between Fas expression and apoptosis in rat myocardium during ischaemia/infarction.</p><p><strong>Methods: </strong>The myocardial ischaemia model was produced by ligating the left coronary artery in Sprague-Dawley rats. The rats were killed from 10 minutes to seven days after surgery. Apoptotic myocardial cells were detected by the in situ terminal deoxynucleotidyl transferase mediated nick end labelling method, and the expression of Fas by immunohistochemistry and western blotting.</p><p><strong>Results: </strong>Cardiomyocytic apoptosis appeared from three to 36 hours after ischaemia. The expression of Fas could be detected by western blot from before surgery to seven days of ischaemia. Apoptosis and the expression of Fas in the cardiomyocytes appeared in different regions of the myocardium: apoptosis in the ischaemic region, Fas in the regions surrounding ischaemic myocardium.</p><p><strong>Conclusion: </strong>These results suggest that there is a tempero-spatial dissociation between the expression of Fas and apoptosis after coronary occlusion. Fas might not directly regulate the apoptosis of cardiomyocytes induced by ischaemia.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"362-7"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.362","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099033","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Cell cycle regulation in patients with intestinal metaplasia at the gastro-oesophageal junction. 胃-食管交界处肠化生患者的细胞周期调节。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.313
N J Trudgill, S K Suvarna, J A Royds, S A Riley
{"title":"Cell cycle regulation in patients with intestinal metaplasia at the gastro-oesophageal junction.","authors":"N J Trudgill,&nbsp;S K Suvarna,&nbsp;J A Royds,&nbsp;S A Riley","doi":"10.1136/mp.56.6.313","DOIUrl":"https://doi.org/10.1136/mp.56.6.313","url":null,"abstract":"<p><strong>Background/aims: </strong>The incidence of oesophageal adenocarcinoma is increasing rapidly and this may be related to the presence of intestinal metaplasia (IM) at the gastro-oesophageal junction (GOJ). Recent studies have distinguished two subtypes of IM at the GOJ: short segment Barrett's oesophagus (SSBO) and IM at a normal squamo-columnar junction (IMNSCJ). Because abnormal expression of cell cycle regulators is common in cancer and precancerous states, cell cycle regulation was studied in patients with IM at the GOJ.</p><p><strong>Methods: </strong>Biopsy samples and resected materials were identified from patients with SSBO (10), IMNSCJ (14), a normal SCJ with (14) and without (12) inflammation, conventional Barrett's oesophagus (BO) (12), and oesophageal adenocarcinoma (12). Sections were stained with antibodies to p21, p27, p53, Ki67, cyclin D1, and c-erbB2 and were assessed independently by two observers, using predetermined criteria.</p><p><strong>Results: </strong>Patients with oesophageal adenocarcinoma showed high expression of c-erbB2, p53, p27, and Ki67. Patients with BO showed expression of c-erbB2 but little expression of other markers. Greatly increased expression of cyclin D1 was seen in patients with IMNSCJ. The expression of all other markers was similar in patients with IMNSCJ and those with SSBO. Cyclin D1 and c-erbB-2 were coexpressed in patients with SSBO and IMNSCJ, and their expression was associated with the presence of p53 and p21.</p><p><strong>Conclusions: </strong>Although the proposed aetiologies of SSBO (gastro-oesophageal reflux) and IMNSCJ (Helicobacter pylori infection) differ, the cell cycle response is similar and both may have malignant potential.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"313-7"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.313","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 23
Expression of P-cadherin, but not E-cadherin or N-cadherin, relates to pathological and functional differentiation of breast carcinomas. P-cadherin的表达与乳腺癌的病理和功能分化有关,而E-cadherin和N-cadherin的表达与乳腺癌的病理和功能分化无关。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.318
A Kovács, J Dhillon, R A Walker
{"title":"Expression of P-cadherin, but not E-cadherin or N-cadherin, relates to pathological and functional differentiation of breast carcinomas.","authors":"A Kovács,&nbsp;J Dhillon,&nbsp;R A Walker","doi":"10.1136/mp.56.6.318","DOIUrl":"https://doi.org/10.1136/mp.56.6.318","url":null,"abstract":"<p><strong>Aims: </strong>To compare the expression of the cell adhesion molecules P-cadherin, N-cadherin, and E-cadherin in invasive and in situ breast carcinomas relative to clinicopathological features (size, node status, type, grade, and receptors) to determine whether expression patterns relate to specific tumour characteristics.</p><p><strong>Methods: </strong>Using immunohistochemistry, 110 invasive and in situ breast carcinomas were examined for the presence, extent, and localisation of all three cadherins. Findings were related to tumour size, type, grade, node status, oestrogen (ER), progesterone, and epidermal growth factor receptor (EGFR) expression for invasive carcinomas and to grade and receptors for in situ carcinomas.</p><p><strong>Results: </strong>P-cadherin was detected in 40% of invasive carcinomas, N-cadherin in 30%, and E-cadherin in 81%. For invasive carcinomas, the presence of P-cadherin significantly correlated with high grade, lack of ER and presence of EGFR, but not tumour size or node status. Carcinomas containing P-cadherin could be put into three categories dependent upon receptor and E-cadherin profile. There were no correlations between E/N-cadherin and size, grade, node status, or receptors. Three of 16 infiltrating lobular carcinomas expressed cytoplasmic but none membranous E-cadherin, and P-cadherin and N-cadherin were present in four carcinomas of this type. E-cadherin was found in all ductal carcinomas in situ, P-cadherin in a proportion of high grade tumours, and N-cadherin in a mixture of grades.</p><p><strong>Conclusion: </strong>P-cadherin but not E/N-cadherin expression in breast carcinomas shows a strong correlation with higher grade (poorer differentiation), lack of ERs, and presence of EGFR, and its expression may aid in the further subdivision of high grade carcinomas.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"318-22"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.318","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099117","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 71
Increased cyclin D1 expression in cancer of the ampulla of Vater: relevance to nuclear beta catenin accumulation and k-ras gene mutation. 壶腹癌细胞周期蛋白D1表达升高:与核β -连环蛋白积累和k-ras基因突变有关。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.336
K Yamazaki, K Hanami, T Nagao, A Asoh, I Sugano, Y Ishida
{"title":"Increased cyclin D1 expression in cancer of the ampulla of Vater: relevance to nuclear beta catenin accumulation and k-ras gene mutation.","authors":"K Yamazaki,&nbsp;K Hanami,&nbsp;T Nagao,&nbsp;A Asoh,&nbsp;I Sugano,&nbsp;Y Ishida","doi":"10.1136/mp.56.6.336","DOIUrl":"https://doi.org/10.1136/mp.56.6.336","url":null,"abstract":"<p><strong>Aims: </strong>Several studies have reported that dysregulation of beta catenin or k-ras mutation promotes cyclin D1 expression. This study investigated the relation between cyclin D1 expression and clinicopathological parameters in carcinoma of the ampulla of Vater (CAV), and also assessed the relation between increased cyclin D1 expression and beta catenin/k-ras status in this series.</p><p><strong>Methods: </strong>Thirty CAVs were evaluated for cyclin D1 expression by immunohistochemistry in relation to patient clinicopathological features. Aberrant beta catenin expression and k-ras mutation were also investigated by immunostaining and direct sequencing, and related to cyclin D1 expression.</p><p><strong>Results: </strong>Increased cyclin D1 expression was seen in 17 of 30 CAVs and was significantly correlated with tumour cell proliferation and disease free survival time (p = 0.018, p = 0.018, respectively). Nuclear accumulation of beta catenin was found in nine of 30 cases, including four cases with missense mutations in exon 3 of CTNNB-1, and was significantly correlated with increased cyclin D1 expression (p = 0.003). k-ras gene mutation was detected in 12 of 30 cases, and was also significantly correlated with increased cyclin D1 expression (p = 0.026). Overall, 14 of 17 CAVs with increased cyclin D1 expression showed nuclear accumulation of beta catenin and/or k-ras mutation.</p><p><strong>Conclusions: </strong>Increased cyclin D1 expression appears to be associated with tumour proliferation and poorer clinical outcome in CAV. It is also associated with both aberrant beta catenin expression and k-ras mutation. These results are consistent with the in vitro data that cyclin D1 can be transactivated by activated beta catenin-T cell factor/LEF and k-ras pathways.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"336-41"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.336","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099120","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
Inverse correlation between high level expression of cyclin E and proliferation index in transitional cell carcinoma of the bladder. 膀胱过渡细胞癌中细胞周期蛋白 E 的高水平表达与增殖指数之间存在反相关性。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.353
A A Khan, P D Abel, K S Chaudhary, Z Gulzar, G W H Stamp, E-N Lalani
{"title":"Inverse correlation between high level expression of cyclin E and proliferation index in transitional cell carcinoma of the bladder.","authors":"A A Khan, P D Abel, K S Chaudhary, Z Gulzar, G W H Stamp, E-N Lalani","doi":"10.1136/mp.56.6.353","DOIUrl":"10.1136/mp.56.6.353","url":null,"abstract":"<p><strong>Background/aims: </strong>Overexpression of the G1 cyclins, D1 and E, and/or downregulation of p27(Kip1) allow uncontrolled tumour cell proliferation. This study investigated the relation between these three cell cycle proteins and tumour proliferation in bladder cancer.</p><p><strong>Method: </strong>Nuclear expression of cyclin D1, cyclin E, and p27(Kip1) was determined immunohistochemically in 52 primary transitional cell carcinomas, and the Ki-67 proliferation marker was also assessed. For each protein, the percentage of positive tumour cell nuclei was determined and analysed as a continuous variable.</p><p><strong>Results: </strong>Advancing tumour grade and pathological stage were accompanied by increasing proliferation indices, but decreasing p27(Kip1) and cyclin D1 expression, with no significant change in cyclin E expression. Overall, cyclin D1 and E expression did not correlate with proliferation. However, in cyclin D1 overexpressing tumours (> or = 5% nuclei positive), the level of cyclin D1 expression positively correlated with proliferation. The correlation between cyclin E expression and proliferation changed from positive to negative with increasing levels of cyclin E expression, accompanied by a coordinate increase in p27(Kip1) expression. Overall, there was an inverse association between p27(Kip1) expression and proliferation. However, a subset of tumours displayed high proliferation indices despite high p27(Kip1) expression. The G1 cyclin index (sum of the level of expression of cyclins D1 and E) correlated positively with proliferation in superficial but not muscle invasive tumours. This correlation was stronger when the G1 cyclin index was adjusted for p27(Kip1) expression.</p><p><strong>Conclusion: </strong>These findings support a role for these proteins in the proliferation, differentiation, and progression of bladder transitional cell carcinomas.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"353-61"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1187355/pdf/mp56000353.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099123","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Expression of the cell cycle regulatory proteins p34cdc2, p21waf1, and p53 in node negative invasive ductal breast carcinoma. 细胞周期调节蛋白p34cdc2、p21waf1和p53在淋巴结阴性浸润性导管性乳腺癌中的表达
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.328
H P Kourea, A K Koutras, C D Scopa, M N Marangos, E Tzoracoeleftherakis, D Koukouras, H P Kalofonos
{"title":"Expression of the cell cycle regulatory proteins p34cdc2, p21waf1, and p53 in node negative invasive ductal breast carcinoma.","authors":"H P Kourea,&nbsp;A K Koutras,&nbsp;C D Scopa,&nbsp;M N Marangos,&nbsp;E Tzoracoeleftherakis,&nbsp;D Koukouras,&nbsp;H P Kalofonos","doi":"10.1136/mp.56.6.328","DOIUrl":"https://doi.org/10.1136/mp.56.6.328","url":null,"abstract":"<p><strong>Aims: </strong>To look for correlations between expression of cell cycle regulatory proteins p34(cdc2), p21(WAF1), and p53 in node negative invasive ductal breast carcinoma, or between these proteins and clinicopathological parameters, and to assess their prognostic value.</p><p><strong>Methods: </strong>Immunohistochemistry using formalin fixed, paraffin wax embedded sections from 94 breast carcinomas. Adjacent benign epithelial breast tissue was available in 74 cases. Median follow up was 72 months.</p><p><strong>Results: </strong>Nuclear and cytoplasmic p34(cdc2) expression was seen in 80 and 62 tumours, respectively; nuclear expression was seen in adjacent benign epithelium in 12 cases. p21(WAF1) and p53 were positive in 48 and 21 tumours, respectively. High expression of p34(cdc2) in neoplastic nuclei was associated with higher histological grade and p53 expression, but not with tumour size, steroid receptor status, patient age, menopausal status, recurrence, metastasis, disease free survival (DFS), or overall survival (OS). p34(cdc2) in tumour cytoplasm was associated with p34(cdc2) nuclear positivity, high tumour grade, and DFS in univariate but not multivariate analysis. In contrast, p34(cdc2) expression in benign tissue independently predicted DFS and OS in univariate and multivariate analysis. Expression of p53 was associated with high tumour grade and negative steroid receptors, but not with recurrence, metastasis, DFS, or OS. p21(WAF1) expression was not associated with the examined parameters.</p><p><strong>Conclusions: </strong>p34(cdc2), p21(WAF1), and p53 expression does not predict outcome in node negative breast carcinoma, although p34(cdc2) expression in benign tissue is related to prognosis. The association between p34(cdc2) and p53 implicates p53 in G2-M cell cycle checkpoint control, possibly via mediators unrelated to p21(WAF1).</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"328-35"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.328","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099119","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 27
Development of molecular methods for the identification of aspergillus and emerging moulds in paraffin wax embedded tissue sections. 石蜡包埋组织切片中曲霉和新生霉菌分子鉴定方法的发展。
Molecular pathology : MP Pub Date : 2003-12-01 DOI: 10.1136/mp.56.6.368
P J Paterson, S Seaton, J McLaughlin, C C Kibbler
{"title":"Development of molecular methods for the identification of aspergillus and emerging moulds in paraffin wax embedded tissue sections.","authors":"P J Paterson,&nbsp;S Seaton,&nbsp;J McLaughlin,&nbsp;C C Kibbler","doi":"10.1136/mp.56.6.368","DOIUrl":"https://doi.org/10.1136/mp.56.6.368","url":null,"abstract":"<p><strong>Background/aims: </strong>Invasive infection with emerging moulds is increasing in incidence and reliable methods for speciating these organisms in tissue sections need to be developed.</p><p><strong>Methods: </strong>Two methods for extracting fungal DNA from paraffin wax embedded tissue sections, based on the TaKaRa DEXPAT kit and QIAamp DNA mini kit, were optimised and compared. DNA was amplified by PCR using pan-fungal probes, and detected by Southern blot hybridisation using a high stringency method with a probe specific for Aspergillus fumigatus and A flavus.</p><p><strong>Results: </strong>The method based on the TaKaRa DEXPAT kit, with additional steps using lyticase and ethanol precipitation, was superior. Less than 10 conidia were detectable using spiked samples and a positive result was obtained with 100% of clinical samples known to be culture positive for A fumigatus. Other moulds could be identified by using species specific probes or by sequencing PCR products.</p><p><strong>Conclusions: </strong>The method based on the TaKaRa DEXPAT kit could detect less than 10 conidia/sample. The method allowed accurate identification of A fumigatus and A flavus and other species could be identified using species specific probes or by DNA sequencing. These methods will provide a valuable diagnostic tool for both patient management and future antifungal and epidemiological studies.</p>","PeriodicalId":79512,"journal":{"name":"Molecular pathology : MP","volume":"56 6","pages":"368-70"},"PeriodicalIF":0.0,"publicationDate":"2003-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1136/mp.56.6.368","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"24099034","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 36
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