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Chemically inspired Erdős–Rényi hypergraphs 受化学启发的厄尔多斯-雷尼超图
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-04-05 DOI: 10.1007/s10910-024-01595-8
{"title":"Chemically inspired Erdős–Rényi hypergraphs","authors":"","doi":"10.1007/s10910-024-01595-8","DOIUrl":"https://doi.org/10.1007/s10910-024-01595-8","url":null,"abstract":"<h3>Abstract</h3> <p>High-order structures have been recognised as suitable models for systems going beyond the binary relationships for which graph models are appropriate. Despite their importance and surge in research on these structures, their random cases have been only recently become subjects of interest. One of these high-order structures is the chemical hypergraph, which relates couples of subsets (hypervertices) of an arbitrary number of vertices. Here we develop the Erdős–Rényi model for chemical hypergraphs, which corresponds to the random realisation of edges of the complete chemical hypergraph. A particular feature of random chemical hypergraphs is that the ratio between their expected number of edges and their expected degree or size is 3/2 for large number of vertices. We highlight the suitability of chemical hypergraphs for modelling large collections of chemical reactions and the importance of random chemical hypergraphs to analyse the unfolding of chemistry.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-04-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140565602","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A time two-grid difference method for nonlinear generalized viscous Burgers’ equation 非线性广义粘性布尔格斯方程的时间双网格差分法
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-28 DOI: 10.1007/s10910-024-01592-x
Yang Shi, Xuehua Yang
{"title":"A time two-grid difference method for nonlinear generalized viscous Burgers’ equation","authors":"Yang Shi, Xuehua Yang","doi":"10.1007/s10910-024-01592-x","DOIUrl":"https://doi.org/10.1007/s10910-024-01592-x","url":null,"abstract":"<p>In this paper, we investigate a time two-grid algorithm to get the numerical solution of nonlinear generalized viscous Burgers’ equation, which is the first time that the two-grid method is used to solve this problem. Based on Crank–Nicolson finite difference scheme, we establish the time two-grid difference (TTGD) scheme which consists of three computational procedures to reduce the computational cost compared with the general finite difference (GFD) scheme. The cut-offf function method is applied to prove the conservation, unique solvability, the prior estimate and convergence in <span>(L^2)</span>-norm and <span>(L^{infty })</span>-norm of the TTGD scheme on the coarse grid and fine grid, respectively. Comparing our TTGD scheme with GFD scheme in Zhang et al. (Appl Math Lett 112:106719, 2021), we provided the proof the uniqueness the solution of the nonlinear scheme, direct proof of convergence in <span>(L^2)</span>-norm and the prior estimate both on the coarse mesh and fine mesh. The numerical results show that our TTGD scheme is more efficient than the GDF scheme in Zhang et al. (2021) in terms of the CPU time. Particularly, our method not only improves the efficiency, but also preserves the energy conservation of the original model.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140312641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pivotal condensation and chemical balancing 枢轴凝结和化学平衡
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-27 DOI: 10.1007/s10910-024-01594-9
Hans-Christian Herbig
{"title":"Pivotal condensation and chemical balancing","authors":"Hans-Christian Herbig","doi":"10.1007/s10910-024-01594-9","DOIUrl":"https://doi.org/10.1007/s10910-024-01594-9","url":null,"abstract":"<p>A universal method, called <i>pivotal condensation</i>, for calculating stoichiometric factors of chemical reactions is presented. It is based on our new approach for calculating the basis of the kernel of a matrix over the field of rational numbers. This approach is referred to as <i>kernel pivotal condensation</i> (ker pc) and is presented in detail. It has roughly the same complexity as Gaussian elimination, but can be performed without working with fractions. It is also shown how ker pc can be adapted as a tool to solve inhomogeneous linear systems, invert matrices (this is referred to as <i>inv pc</i>) and determine simultaneously the four subspaces (referred to as <i>4 pc</i>). Besides, the balancing by inspection method, which is widely used in practice to reduce the size of a linear system arising in chemical balancing, is formulated in a mathematical language. When calculating stoichiometric factors of chemical balancing problems with a non-unique solution the natural question arises how to determine a basis that generates all the solutions over the integers. A method, referred to as <i>smitheration</i>, is introduced that permits to determine such an integer basis from a basis over the rational numbers. If there are few solutions this approach is more efficient than calculating a Smith normal form directly. It is convenient to work over principal ideal domains instead of the ring of integers, so that one can treat balancing problems that depend on one parameter as well.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140312655","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A high-order B-spline collocation method for solving a class of nonlinear singular boundary value problems 求解一类非线性奇异边界值问题的高阶 B-样条配位法
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-26 DOI: 10.1007/s10910-024-01590-z
Pradip Roul
{"title":"A high-order B-spline collocation method for solving a class of nonlinear singular boundary value problems","authors":"Pradip Roul","doi":"10.1007/s10910-024-01590-z","DOIUrl":"https://doi.org/10.1007/s10910-024-01590-z","url":null,"abstract":"<p>A high-order numerical scheme based on collocation of a quintic B-spline over finite element is proposed for the numerical solution of a class of nonlinear singular boundary value problems (SBVPs) arising in various physical models in engineering and applied sciences. Five illustrative examples are presented to illustrate the applicability and accuracy of the method. In order to justify the advantage of the proposed numerical scheme, the computed results are compared with the results obtained by two other fourth-order numerical methods, namely the finite difference method (Chawla et al. in BIT 28(1):88–97, 1988) and B-spline collocation method (Goh et al. in Comput Math Appl 64:115–120, 2012).</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140302063","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction: The dual descriptor potential 更正:双重描述势
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-26 DOI: 10.1007/s10910-024-01616-6
Jorge Martínez-Araya
{"title":"Correction: The dual descriptor potential","authors":"Jorge Martínez-Araya","doi":"10.1007/s10910-024-01616-6","DOIUrl":"https://doi.org/10.1007/s10910-024-01616-6","url":null,"abstract":"","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140379520","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unsteady triple diffusive oscillatory flow in a Voigt fluid 沃伊特流体中的非稳态三重扩散振荡流
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-24 DOI: 10.1007/s10910-024-01591-y
Y. Vinod, Suma Nagendrappa Nagappanavar, Sangamesh, K. R. Raghunatha, D. L. Kiran Kumar
{"title":"Unsteady triple diffusive oscillatory flow in a Voigt fluid","authors":"Y. Vinod, Suma Nagendrappa Nagappanavar, Sangamesh, K. R. Raghunatha, D. L. Kiran Kumar","doi":"10.1007/s10910-024-01591-y","DOIUrl":"https://doi.org/10.1007/s10910-024-01591-y","url":null,"abstract":"<p>Convective energy and mass transfer in a non-Newtonian fluid layers a wide-spread physical phenomenon in natural and technical systems. Triple diffusive convection plays a crucial role in chemical engineering by enabling the understanding and optimisation of mass transfer processes involving multiple components. It is essential for designing efficient separation systems, optimising catalysts, predicting reaction kinetics, and improving environmental processes. The motivation of this paper is to explore an Oscillatory flow of a triple diffusive convection in a Voigt fluid layer. The governing partial differential equations are transformed into coupled ordinary differential equations with the help of the oscillation technique. The study emphasises the effects of known physical parameters, such as the thermal Grashof number, solutal Grashof number, Prandtl number, Lewis numbers and Voigt fluid parameters on velocity, temperature, concentrations and rate of heat and mass transfers. In particularly, the study finds that skin friction increases on both channel plates with increasing injection on the heated plate.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140302183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
In vivo brain MRS at a 1.5T clinical scanner: Optimized derivative fast Fourier transform for high-resolution spectra from time signals encoded with and without water suppression 在 1.5T 临床扫描仪上进行活体脑 MRS 扫描:优化衍生快速傅立叶变换,从有水抑制和无水抑制的时间信号编码中获得高分辨率光谱
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-22 DOI: 10.1007/s10910-024-01597-6
Dževad Belkić, Karen Belkić
{"title":"In vivo brain MRS at a 1.5T clinical scanner: Optimized derivative fast Fourier transform for high-resolution spectra from time signals encoded with and without water suppression","authors":"Dževad Belkić, Karen Belkić","doi":"10.1007/s10910-024-01597-6","DOIUrl":"https://doi.org/10.1007/s10910-024-01597-6","url":null,"abstract":"<p>We study single-voxel in vivo proton magnetic resonance spectroscopy (MRS) of white matter in the brain of a 25 year old healthy male volunteer. The free induction decay (FID) data of short length (0.5KB) are encoded at a long echo time (272 ms) with and without water suppression at a clinical scanner of a weak magnetic field (1.5T). For these FIDs, the fast Fourier transform (FFT) gives sparse, rough and metabolically uninformative spectra. In such spectra, resolution and signal to noise ratio (SNR) are poor. Exponential or Gaussian filters applied to the FIDs can improve SNR in the FFT spectra, but only at the expense of the worsened resolution. This impacts adversely on in vivo MRS for which both resolution and SNR of spectra need to be very good or excellent, without necessarily resorting to stronger magnetic fields. Such a long sought goal is at last within reach by means of the optimized derivative fast Fourier transform (dFFT), which dramatically outperforms the FFT in every facet of signal estimations. The optimized dFFT simultaneously improves resolution and SNR in derivative spectra. They are presently shown to be of comparably high quality irrespective of whether water is suppressed or not in the course of FID encodings. The ensuing benefits of utmost relevance in the clinic include a substantial shortening of the patient examination time. The implied significantly better cost-effectiveness should make in vivo MRS at low-field clinical scanners (1.5T) more affordable to ever larger circles of hospitals worldwide.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140198839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
On the thermal properties of pure and defective Ψ-graphene nanotubes by molecular dynamics simulations 通过分子动力学模拟研究纯Ψ-石墨烯纳米管和缺陷Ψ-石墨烯纳米管的热特性
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-21 DOI: 10.1007/s10910-024-01588-7
Pingfang Yuan, Zhenfeng Liu, Yanxin Xie, Yafei Meng, Mengdie Li, Keke Chen
{"title":"On the thermal properties of pure and defective Ψ-graphene nanotubes by molecular dynamics simulations","authors":"Pingfang Yuan, Zhenfeng Liu, Yanxin Xie, Yafei Meng, Mengdie Li, Keke Chen","doi":"10.1007/s10910-024-01588-7","DOIUrl":"https://doi.org/10.1007/s10910-024-01588-7","url":null,"abstract":"<p>The effect of defects on the thermal properties of Ψ-Graphene Nanotubes (Ψ-GNTs) is investigated in this study using Molecular Dynamics simulations. The results reveal that the thermal properties of Ψ-GNTs are profoundly impacted by the presence of defects. Specifically, a significant reduction in thermal conductivity is observed with increasing defect concentrations. This reduction is attributed to the scattering of phonons by the defects, which leads to increased phonon–phonon interactions and decreased thermal transport efficiency. Furthermore, the effect of temperature on the thermal properties of defective Ψ-GNTs is investigated. The findings demonstrate a nonlinear decrease in thermal conductivity with increasing temperature.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140198842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Numerical approach for time-fractional Burgers’ equation via a combination of Adams–Moulton and linearized technique 结合亚当斯-莫尔顿和线性化技术的时间分数布尔格斯方程数值方法
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-18 DOI: 10.1007/s10910-024-01589-6
Yonghyeon Jeon, Sunyoung Bu
{"title":"Numerical approach for time-fractional Burgers’ equation via a combination of Adams–Moulton and linearized technique","authors":"Yonghyeon Jeon, Sunyoung Bu","doi":"10.1007/s10910-024-01589-6","DOIUrl":"https://doi.org/10.1007/s10910-024-01589-6","url":null,"abstract":"<p>Recently, fractional derivatives have become increasingly important for describing phenomena occurring in science and engineering fields. In this paper, we consider a numerical method for solving the fractional Burgers’ equations (FBEs), a vital topic in fractional partial differential equations. Due to the difficulty of the fractional derivatives, the nonlinear FBEs are linearized through the Rubin–Graves linearization scheme combined with the implicit the third-order Adams–Moulton scheme. Additionally, in the spatial direction of the FBEs, the fourth-order central finite difference scheme is used to obtain more accurate solutions. The convergence of the proposed scheme is theoretically and numerically analyzed. Also, the efficiency is demonstrated through several numerical experiments and compared with that of existing methods.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140168717","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Improved rotating Kratzer–Fues oscillator: eigenenergies, eigenfunctions, coherent states and ladder operators 改进的旋转克拉策-福斯振荡器:特征能、特征函数、相干态和梯形算子
IF 1.7 3区 化学
Journal of Mathematical Chemistry Pub Date : 2024-03-16 DOI: 10.1007/s10910-024-01585-w
Marcin Molski
{"title":"Improved rotating Kratzer–Fues oscillator: eigenenergies, eigenfunctions, coherent states and ladder operators","authors":"Marcin Molski","doi":"10.1007/s10910-024-01585-w","DOIUrl":"https://doi.org/10.1007/s10910-024-01585-w","url":null,"abstract":"<p>Exact analytical energy formula for the rotating Kratzer–Fues oscillator with (<i>v</i>, <i>J</i>)-dependent potential parameters is obtained. It was used to reproduce the spectral data generated by the vibrational transitions <span>(vrightarrow v+1, v=0, 1 ldots 7)</span> in <span>(J=0,1ldots 47)</span> rotational states of dinitrogen <span>(^{14})</span>N<span>(_2)</span> and <span>(^{15})</span>N<span>(_2)</span> in the ground electronic state <span>(X^1Sigma _g^+)</span>. Calculations performed for two isotopic variants enabled the selection of the mass-dependent and independent potential parameters defining the model. To check the ability of the eigenenergies derived to reproduce rotational transitions measured with kHz accuracy, calculations for <span>(^{74})</span>Ge<span>(^{32})</span>S, <span>(^{79})</span>Br<span>(^{35})</span>Cl and <span>(^{1})</span>H<span>(^{35})</span>Cl were performed, obtaining agreement between theoretical and experimental results. Minimum uncertainty coherent states and ladder operators for the rotating improved Kratzer–Fues oscillator are also constructed.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-03-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140151062","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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