Biodiversity Data Journal最新文献

{"title":"Culicoides Latreille (Diptera, Ceratopogonidae) of Colombia: records from the collection of insects of medical importance from National Institute of Health","authors":"E. Santamaría, Marco Súarez, Ricardo Ortiz Gallego, P. Fuya, Geraldine Páez, Catalina Marceló-Díaz","doi":"10.3897/bdj.12.e72511","DOIUrl":"https://doi.org/10.3897/bdj.12.e72511","url":null,"abstract":"The collection of insects of medical importance from the Instituto Nacional de Salud, INS (Bogotá, Colombia: https://www.ins.gov.co/Paginas/Inicio.aspx), was started in 1934 with the aim of being an institutional and national repository of the biodiversity of insects involved in vector-borne diseases of importance in public health. Today, the entomological collection includes more than 7,500 specimens.\u0000 The ceratopogonid insects are one group of Diptera that are represented in this collection. Within the Ceratopogonidae, the genus Culicoides Latreille, 1809 is relevant in public health because of the nuisance caused by their bites when they are presented in great abundance and because of their role as vectors of several agents (virus, protozoa and nematodes) that cause diseases to humans and to animals (Mellor et al. 2000, Mullen 2002). An overview of the Ceratopogonidae, represented in this collection, is presented here. A total of 801 individuals, mainly adults of the genus Culicoides (90%) are represented. The collection is the result of the effort of several researchers of the Group of Entomology at INS. These researchers collected ceratopogonids when they went to different transmission scenarios of vector-borne diseases in Colombia, with the purpose of making entomological characterisations including the processing, assembly and identification of the specimens in the laboratory.\u0000 New information about the geographical distribution of 39 species of the genus Culicoides in Colombia. All data have been uploaded to GBIF and are publicly available there.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141345366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Biodiversity of testate amoebae in Sphagnum bogs: the dataset from forest-steppe ecotone (Middle Volga Territory, Russia)","authors":"Nailia Saldaeva, K. Babeshko, V. Chernyshov, Anton Esaulov, Alexander Komarov, Nikita Kriuchkov, N. Mazei, D. Saldaev, Tamara Stojko, Andrey N. Tsyganov, Yu. A. Mazei","doi":"10.3897/bdj.12.e125582","DOIUrl":"https://doi.org/10.3897/bdj.12.e125582","url":null,"abstract":"Testate amoebae are a polyphyletic group of unicellular eukaryotic organisms that are characterised by a rigid shell and inhabit mostly freshwater and terrestrial ecosystems. They are particularly abundant in peatlands, especially in Sphagnum-dominated biotopes. Peatland hydrology is the most important influence on testate amoebae communities. The good preservation of the shells in peat deposits and their response to hydrological regime changes are the principles for palaeohydrological reconstructions. Any changes in the water balance of mires should be expected to have far-reaching effects on biogeochemical cycles, productivity, carbon dioxide and methane exchange.\u0000 This paper presents a dataset (Darwin Core Archive – DwC-A) on the distribution of Sphagnum-dwelling testate amoebae in nine mires located in the forest-steppe subzone of the East European Plane. The dataset includes information about 86 taxa belonging to 29 genera and contains 3,123 occurrences of 49,874 individuals. The following environmental variables are provided: microtopography, oxidising and reducing potential, total mineralisation, substrate temperature, acidity, substrate wetness and water table depth. These data might be used for biogeographical and palaeoecological studies, including quantitative reconstructions.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141350350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"First record of the genus Conotalopia Iredale, 1929 (Vetigastropoda, Trochidae) in China","authors":"Lu Qi, Biyang Xu, Lingfeng Kong, Qi Li","doi":"10.3897/bdj.12.e117114","DOIUrl":"https://doi.org/10.3897/bdj.12.e117114","url":null,"abstract":"The genus Conotalopia Iredale, 1929 consisting of marine trochids, primarily inhabits the intertidal zone. Globally, eight recent species have been documented, all of which occur in the Pacific Region. The genus has not previously been recorded from Chinese seas.\u0000 This study fills a knowledge gap by reporting, for the first time, the presence of the trochid genus Conotalopia Iredale, 1929 in China. Specifically, Conotalopia sematensis (Oyama, 1942) was detailed using morphological characteristics derived from the shell (Fig. 1A-F and H-I), operculum (Fig. 1G) and radula (Fig. 1J-L). Additionally, this study introduces comprehensive scanning electron microscope illustrations and molecular data, contributing valuable taxonomic information for the first time.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141360005","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Camera-trapping: wild and domestic species occurrences in three Pyrenean pastures","authors":"Manon Culos, Alice Ouvrier, Emilie Lerigoleur, Sarah Bitsch, Marie Dewost, Anaïs Guédon, Jonas Guignet, Agathe Le Guével, Aymeric Metz, Oscar Vilbert, Coline Vinette, Ruppert Vimal","doi":"10.3897/bdj.12.e126097","DOIUrl":"https://doi.org/10.3897/bdj.12.e126097","url":null,"abstract":"The co-existence between brown bears (Ursus arctos Linnaeus, 1758) and farmers in the Pyrenees has been a major concern for several decades. The bear's depredation on livestock has multiple implications for traditional practices of extensive grazing and calls for a better understanding of the various ways in which humans and non-humans interact across different territories. The present dataset stems from \"The Pastoralism and Bears in the Pyrenees\" research project led by the GEODE laboratory (UMR 5602 CNRS-UT2J) in partnership with the Association Dissonances. Focusing on three summer pastures as places of encounter, this project proposes to explore the definition of co-existence, based on context-dependent and constantly evolving relationships between bears and pastoralists. As part of an interdisciplinary approach combining animal geography and ecology, the spatio-temporal activity of the different species was explored using a network of 118 camera traps.\u0000 The 118 camera traps were installed on the three summer pastures while livestock was present in the mountains between May and October, from 2021 to 2023 and were set in a 400 m ✕ 400 m grid covering a total area of around 2,000 ha. The present dataset contains 57,928 occurrences of 22 taxon categories, including 19 identified species, two family categories (equids and mustelids) and one class category (birds). As pastoral activity is significantly present in these areas, livestock (sheep (Ovis aries Linnaeus, 1758), equids, cows (Bos taurus Linnaeus, 1758) and goats (Capra hircus Linnaeus, 1758)) account for 16,207 occurrences across the three pastures. The three main wild species captured over the three years and three pastures were the red deer (Cervus elaphus Linnaeus, 1758; 9,517 occurrences), red fox (Vulpes vulpes Linnaeus, 1758; 9,400 occurrences) and wild boar (Sus scrofa Linnaeus, 1758; 4,016 occurrences).\u0000 Data are aggregated at the grid scale. Nonetheless, the exact locations of each camera trap as well as the photos can be requested from us.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141360241","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Ground spiders (Chelicerata, Araneae) of an urban green space: intensive sampling in a protected area of Rome (Italy) reveals a high diversity and new records to the Italian territory.","authors":"Tommaso Fusco, Simone Fattorini, Lorenzo Fortini, Enrico Ruzzier, Andrea Di Giulio","doi":"10.3897/BDJ.12.e122896","DOIUrl":"10.3897/BDJ.12.e122896","url":null,"abstract":"<p><strong>Background: </strong>Urbanisation is a rapidly growing global phenomenon leading to habitat destruction, fragmentation and degradation. However, urban areas can offer opportunities for conservation, particularly through the presence of green spaces which can even provide important habitats for imperilled species. Spiders, which play crucial roles in ecosystem functioning, include many species that can successfully exploit urban environments. Placed in the middle of the Mediterranean global biodiversity hotspot, Italy possesses an exceptionally rich spider fauna, yet comprehensive data on urban spider communities are still limited. More information on urban spiders in Italy would be extremely beneficial to support conservation efforts, especially in central and southern Italy, where knowledge on the spider fauna is largely incomplete.</p><p><strong>New information: </strong>The current study focused on the spider diversity of a large protected area (Appia Antica Regional Park) in urban Rome, Italy. A total of 120 spider species belonging to 83 genera and 28 families were identified, with 70 species being new records to the Province of Rome, 39 to the Latium Region and two (<i>Pelecopsisdigitulus</i> Bosmans & Abrous, 1992 and <i>Palliduphantesarenicola</i> (Denis, 1964)) to Italy.Forty-one species were recorded during autumn/winter sampling and 107 in spring/summer. The spider fauna recorded from the study area included about 37% of the total spider fauna known from the Province of Rome, 28% of that of the Latium Region and 7% of the entire Italian territory. The most represented families in terms of species richness were Gnaphosidae and Linyphiidae, which accounted for more than 40% of the sampled fauna. Lycosidae were the most abundant family (29% of captured individuals), followed by Zodariidae (16% of captured individuals), Linyphiidae (13% of captured individuals) and Gnaphosidae (7.5% of captured individuals). From a biogeographical point of view, most of the collected species belonged to chorotypes that extend for large areas across Europe and the Mediterranean. The research highlights the role of urban green spaces as refuges for spiders and the importance of arachnological research in urban areas as sources of information on spider biodiversity at larger scales.</p>","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11179096/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141332573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Preserving morphology while extracting DNA: a non-destructive field-to-museum protocol for slide-mounted specimens.","authors":"Santiago Jaume-Schinkel, Björn Müller, Sergio Avila-Calero, Sandra Kukowka, Vera Rduch, Ximo Mengual","doi":"10.3897/BDJ.12.e119448","DOIUrl":"10.3897/BDJ.12.e119448","url":null,"abstract":"<p><p>Our study aimed to develop an optimised laboratory protocol ensuring the preservation of morphological structures and extraction of high-quality DNA sequences from Psychodidae (Insecta, Diptera) specimens. With 310 analysed specimens, we investigated the impact of distinct laboratory treatments by employing two shaking categories (constant and interrupted) with five different incubation periods (16, 12, 8, 4 and 2 hours) during the DNA extraction process. Notably, 80.65% of the specimens exhibited morphological changes during DNA extraction. Our results indicated no statistical difference between constant and interrupted shaking for the total of morphological structures lost. However, within each shaking category, the loss of structures was influenced significantly by the incubation period. Prolonged incubation correlated with increased structural losses, whereas shorter incubation periods caused minor alterations in structures lost. In addition, our results showed a significant difference between constant and interrupted shaking treatments for DNA concentration. Likewise, the incubation period showed differences within each shaking category. Successful COI sequencing was achieved in 89.6% of specimens, with negligible differences in DNA fragment lengths across treatments. Our findings underscore the importance of an optimised protocol and its potential in systematic research involving nematoceran dipteran specimens by balancing morphological integrity and DNA extraction efficiency.</p>","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11179092/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141332574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"An Observatory to monitor range extension of the Mediterranean monk seal based on its eDNA traces: collecting data and delivering results in the \"Open Science\" era.","authors":"Elena Valsecchi, Alessandro Gabbiadini","doi":"10.3897/BDJ.12.e120201","DOIUrl":"10.3897/BDJ.12.e120201","url":null,"abstract":"<p><p>The monk seal is the most endangered pinniped in the world and the only one found in the Mediterranean, where its distribution and abundance have suffered a drastic decline in the last few decades. Data on its status are scattered due to both its rarity and evasiveness and records are biased towards occasional, mostly coastal encounters. Nowadays, molecular techniques allow us to detect and quantify minute amounts of DNA traces released into the environment (eDNA) by any organism. A species-specific molecular assay is now available for detecting the recent presence of the monk seal in the water column through the analysis of sea-water samples collected from the sea surface. The project \"Spot the Monk\" uses this non-invasive detection tool to monitor monk seal occurrence in Mediterranean waters by means of eDNA analysis. The simplicity in the acquisition of samples together with the need to collect samples in multiple points simultaneously made the project well suited to the involvement of the general public. Up to today, about 350 samples have been collected and analysed in the central-western Mediterranean by researchers and a multifarious range of citizen scientists - from recreational sailing organisations, both amateur and competitive sportsmen, to fishermen. This work announces the launch of an open-source Observatory (https://www.spot-the-monk-observatory.com/) where the project outcomes are publicly accessible as soon as they are produced. Embracing the principles of Open Science, we believe that such an approach can contribute to filling the knowledge gap about the distribution of this charismatic species in our seas, providing, at the same time, a proof of concept on how data collected by a variety of actors can be returned to the scientific and non-scientific communities in an innovative format for immediate consultation.</p>","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11176811/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141332572","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"A new spider species of Belisana Thorell, 1898 (Araneae, Pholcidae) from Guizhou Province, south-western China","authors":"Bing Wang, Zhiyuan Yao, Xiaoqing Zhang","doi":"10.3897/bdj.12.e125111","DOIUrl":"https://doi.org/10.3897/bdj.12.e125111","url":null,"abstract":"China exhibits remarkable diversity of the spider genus Belisana Thorell, 1898, with 62 species recorded to date. However, the largest number of Belisana species was found in Yunnan Province (23 ssp.), while only seven species were found in Guizhou Province.\u0000 In this paper, Belisana wangchengi sp. nov. as a new species is described from Guizhou Province, China.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141267466","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Twenty-five-year mapping species of the superfamily Cercopoidea (Hemiptera, Auchenorrhyncha) in Bulgaria","authors":"Radost Angelova, I. Gjonov","doi":"10.3897/bdj.12.e124720","DOIUrl":"https://doi.org/10.3897/bdj.12.e124720","url":null,"abstract":"In Bulgaria, the superfamily Cercopoidea consists of 18 species in two families - Aphrophoridae and Cercopidae. Of these, 13 species of Aphrophoridae belong to the genera Philaenus, Neophilaenus, Aphrophora and Lepyronia and five species of Cercopidae are in Cercopis and Haematoloma. Over a period of 25 years of extensive research on the species of the superfamily in the country, a large amount of geo-referenced data has been collected on 17 of the species, which has significantly increased knowledge of their biogeography.\u0000 The paper presents a dataset of the materials of the superfamily Cercopoidea deposited in the Zoological Collection of the University of Sofia (BFUS). The specimens were collected from 888 localities in Bulgaria over a period of 25 years (1997 to 2022). The Cercopoidea collection comprises 8722 specimens grouped into 6670 collection objects.\u0000 The text provides data for each species, including a distribution map, regional literature taxon names and identifiers from eight taxonomic infrastructures (GBIF, BOLD, OpenBiodiv, BHL, COL, Plazi, EOL and TaxonWorks). It also includes data from literature and new records, phenology and altitudinal distribution in Bulgaria, as well as known host plants. Live photographs are provided for all species. A nanopublication presents the establishment of a new host plant, Asphodeline lutea (L.) Rchb., for the species Philaenus signatus Melichar, 1896.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141266118","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Heteropoda lebar sp. nov.: a new species from the highlands in Pahang State, Malaysia (Sparassidae, Heteropodinae) with a distinct sexual colour dimorphism","authors":"Wenqin Chen, Peter Jäger, Yang Zhu, Long Yu, He Zhang","doi":"10.3897/bdj.12.e125745","DOIUrl":"https://doi.org/10.3897/bdj.12.e125745","url":null,"abstract":"The genus Heteropoda Latreille, 1804, is ranked as the second within the family Sparassidae Bertkau, 1872. Up to now, sixteen species of this genus have been described from Malaysia.\u0000 A new species of this genus in the highlands of Pahang State, Malaysia is described under the name of H. lebar sp. nov.. Individuals of the new species live in primary forests on forest floor, active in the night on the leaf litter.","PeriodicalId":55994,"journal":{"name":"Biodiversity Data Journal","volume":null,"pages":null},"PeriodicalIF":1.3,"publicationDate":"2024-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141266270","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}