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Genome-Wide Identification of WUSCHEL-Related Homeobox Gene Family and their Expression Analysis During Somatic Embryogenesis in Oil Palm (Elaeis guineensis) 油棕(Elaeis guineensis) wuschell相关同源盒基因家族的全基因组鉴定及体细胞胚胎发生过程中的表达分析
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-09-06 DOI: 10.1007/s12042-021-09299-y
Zhang, Anni, Li, Yinchun, Yarra, Rajesh, Li, Rui, Cao, Hongxing, Jin, Longfei
{"title":"Genome-Wide Identification of WUSCHEL-Related Homeobox Gene Family and their Expression Analysis During Somatic Embryogenesis in Oil Palm (Elaeis guineensis)","authors":"Zhang, Anni, Li, Yinchun, Yarra, Rajesh, Li, Rui, Cao, Hongxing, Jin, Longfei","doi":"10.1007/s12042-021-09299-y","DOIUrl":"https://doi.org/10.1007/s12042-021-09299-y","url":null,"abstract":"<p><i>WUSCHEL</i>-related homeobox (<i>WOX</i>) genes have been shown to play important roles in the regulation of gene transcription involved in the early phases of embryogenesis. In this study, a total of 15 <i>EgWOXs</i> were identified from the oil palm genome and their physicochemical properties were analyzed. Phylogenetic analysis divided 15 EgWOXs into three different clades i.e. modern, ancient, and intermediate. EgWOXs contain ten conserved motifs and two conserved domains. Further, cis-acting elements analysis identified the presence of light, stress, and phytohormone responsive elements in the promoter regions of <i>EgWOX</i>s. RNA-seq analysis of <i>EgWOX</i> genes in different embryogenesis stages of oil palm embryogenic callus (EC), non-embryogenic callus (NEC), and somatic embryo (SE), indicated the significant expression of <i>EgWOXs</i> in EC and SE stages. Real-time PCR analysis results showed the significant expression of <i>EgWOX2</i>, <i>EgWOX7</i>, <i>EgWOX8</i>, <i>EgWOX9</i>, and <i>EgWOX12</i> genes in somatic embryogenesis stage, indicating their roles in regulating oil palm somatic embryogenesis.</p>","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"351 1","pages":""},"PeriodicalIF":2.0,"publicationDate":"2021-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138508401","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Generation of Transgenic Napier Grass (Cenchrus purpureus Schum.) Plants by Biolistic Gene Transfer of a Minimal Expression Cassette 利用最小表达盒生物基因转移技术产生转基因纳皮尔草
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-09-06 DOI: 10.1007/s12042-021-09298-z
F. Faleiro, J. Y. Kim, A. Parikh, F. Altpeter
{"title":"Generation of Transgenic Napier Grass (Cenchrus purpureus Schum.) Plants by Biolistic Gene Transfer of a Minimal Expression Cassette","authors":"F. Faleiro, J. Y. Kim, A. Parikh, F. Altpeter","doi":"10.1007/s12042-021-09298-z","DOIUrl":"https://doi.org/10.1007/s12042-021-09298-z","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"371 - 380"},"PeriodicalIF":2.0,"publicationDate":"2021-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42205378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genome-wide Identification and Characterization of Expansin Genes in Jute 黄麻扩增素基因的全基因组鉴定与鉴定
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-07-31 DOI: 10.1007/s12042-021-09296-1
Md. Sabbir Hossain, B. Ahmed, M. Ullah, Md. Samiul Haque, M. Islam
{"title":"Genome-wide Identification and Characterization of Expansin Genes in Jute","authors":"Md. Sabbir Hossain, B. Ahmed, M. Ullah, Md. Samiul Haque, M. Islam","doi":"10.1007/s12042-021-09296-1","DOIUrl":"https://doi.org/10.1007/s12042-021-09296-1","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"15 1","pages":"40 - 54"},"PeriodicalIF":2.0,"publicationDate":"2021-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09296-1","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"52873191","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Physiological Response of Lagerstroemia indica (L.) Pers. Seedlings to Drought and Rewatering 紫薇的生理反应珀耳斯。幼苗抗旱和复浇水
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-07-13 DOI: 10.1007/s12042-021-09294-3
Yeshe Wang, Fei Ni, Danhong Yin, Lijun Chen, Yinghui Li, Lixia He, Yali Zhang
{"title":"Physiological Response of Lagerstroemia indica (L.) Pers. Seedlings to Drought and Rewatering","authors":"Yeshe Wang, Fei Ni, Danhong Yin, Lijun Chen, Yinghui Li, Lixia He, Yali Zhang","doi":"10.1007/s12042-021-09294-3","DOIUrl":"https://doi.org/10.1007/s12042-021-09294-3","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"360 - 370"},"PeriodicalIF":2.0,"publicationDate":"2021-07-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09294-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47301687","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
QTL Mapping and Expression Analysis of Candidate Genes for Salt and Drought Tolerance in Corchorus capsularis Seedlings 荚膜花衣幼苗耐盐耐旱候选基因的QTL定位与表达分析
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-07-07 DOI: 10.1007/s12042-021-09292-5
A. Ibrahim, Yi Xu, Sylvain Niyitanga, Muhammad Zohaib Afzal, Lilan Zhang, Liemei Zhang, J. Qi, Liwu Zhang
{"title":"QTL Mapping and Expression Analysis of Candidate Genes for Salt and Drought Tolerance in Corchorus capsularis Seedlings","authors":"A. Ibrahim, Yi Xu, Sylvain Niyitanga, Muhammad Zohaib Afzal, Lilan Zhang, Liemei Zhang, J. Qi, Liwu Zhang","doi":"10.1007/s12042-021-09292-5","DOIUrl":"https://doi.org/10.1007/s12042-021-09292-5","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"345 - 359"},"PeriodicalIF":2.0,"publicationDate":"2021-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09292-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48742320","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Genome-wide Identification and Abiotic Stress Response Pattern Analysis of NF-Y Gene Family in Peanut (Arachis Hypogaea L.) 花生NF-Y基因家族的全基因组鉴定及非生物胁迫反应模式分析
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-06-30 DOI: 10.1007/s12042-021-09295-2
Qian Wan, Lu Luo, Xiurong Zhang, Yuying Lv, Suqing Zhu, L. Kong, Y. Wan, Fengzhen Liu, Kun-Pu Zhang
{"title":"Genome-wide Identification and Abiotic Stress Response Pattern Analysis of NF-Y Gene Family in Peanut (Arachis Hypogaea L.)","authors":"Qian Wan, Lu Luo, Xiurong Zhang, Yuying Lv, Suqing Zhu, L. Kong, Y. Wan, Fengzhen Liu, Kun-Pu Zhang","doi":"10.1007/s12042-021-09295-2","DOIUrl":"https://doi.org/10.1007/s12042-021-09295-2","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"329 - 344"},"PeriodicalIF":2.0,"publicationDate":"2021-06-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09295-2","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49487004","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Systematic Identification, Evolution and Expression Analysis of the SPL Gene Family in Sugarcane (Saccharum spontaneum) 甘蔗(Saccharum spontanum) SPL基因家族的系统鉴定、进化及表达分析
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-06-08 DOI: 10.1007/s12042-021-09293-4
Xiaomin Feng, Yongjun Wang, N. Zhang, Xiangbo Zhang, Jiayun Wu, Yong-Ping Huang, M. Ruan, Jisen Zhang, Y. Qi
{"title":"Systematic Identification, Evolution and Expression Analysis of the SPL Gene Family in Sugarcane (Saccharum spontaneum)","authors":"Xiaomin Feng, Yongjun Wang, N. Zhang, Xiangbo Zhang, Jiayun Wu, Yong-Ping Huang, M. Ruan, Jisen Zhang, Y. Qi","doi":"10.1007/s12042-021-09293-4","DOIUrl":"https://doi.org/10.1007/s12042-021-09293-4","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"313 - 328"},"PeriodicalIF":2.0,"publicationDate":"2021-06-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09293-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47013215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Effect of Environmental Factors on Growth and Development of Fruits 环境因子对果实生长发育的影响
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-05-31 DOI: 10.1007/s12042-021-09291-6
M. Ali, A. Yousef, Binqi Li, Faxing Chen
{"title":"Effect of Environmental Factors on Growth and Development of Fruits","authors":"M. Ali, A. Yousef, Binqi Li, Faxing Chen","doi":"10.1007/s12042-021-09291-6","DOIUrl":"https://doi.org/10.1007/s12042-021-09291-6","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"226 - 238"},"PeriodicalIF":2.0,"publicationDate":"2021-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09291-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48390237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 25
Genome-wide Identification and Analysis of Late Embryogenesis Abundant (LEA) Genes in Musa acuminata 沙蚕晚期胚胎发育丰度(LEA)基因的全基因组鉴定与分析
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-05-25 DOI: 10.1007/s12042-021-09289-0
Senuri Piyatissa, D. Bandupriya
{"title":"Genome-wide Identification and Analysis of Late Embryogenesis Abundant (LEA) Genes in Musa acuminata","authors":"Senuri Piyatissa, D. Bandupriya","doi":"10.1007/s12042-021-09289-0","DOIUrl":"https://doi.org/10.1007/s12042-021-09289-0","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"295 - 312"},"PeriodicalIF":2.0,"publicationDate":"2021-05-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09289-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43847469","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Genome-Wide Identification and Expression Profiling of the bHLH Transcription Factor Gene Family in Saccharum spontaneum Under Bacterial Pathogen Stimuli 细菌病原体刺激下自发性糖bHLH转录因子基因家族的全基因组鉴定和表达谱
IF 2 4区 生物学
Tropical Plant Biology Pub Date : 2021-05-24 DOI: 10.1007/s12042-021-09290-7
Ahmad Ali, T. Javed, Uroosa Zaheer, Jingsong Zhou, Mei-Ting Huang, H. Fu, San-Ji Gao
{"title":"Genome-Wide Identification and Expression Profiling of the bHLH Transcription Factor Gene Family in Saccharum spontaneum Under Bacterial Pathogen Stimuli","authors":"Ahmad Ali, T. Javed, Uroosa Zaheer, Jingsong Zhou, Mei-Ting Huang, H. Fu, San-Ji Gao","doi":"10.1007/s12042-021-09290-7","DOIUrl":"https://doi.org/10.1007/s12042-021-09290-7","url":null,"abstract":"","PeriodicalId":54356,"journal":{"name":"Tropical Plant Biology","volume":"14 1","pages":"283 - 294"},"PeriodicalIF":2.0,"publicationDate":"2021-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1007/s12042-021-09290-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46995219","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
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