Reviews in Computational Chemistry最新文献

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Brittle Fracture: From Elasticity Theory to Atomistic Simulations 脆性断裂:从弹性理论到原子模拟
Reviews in Computational Chemistry Pub Date : 2010-09-23 DOI: 10.1002/9780470890905.CH1
S. Giordano, A. Mattoni, L. Colombo
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引用次数: 13
Semiclassical Bohmian Dynamics 半经典波西米亚动力学
Reviews in Computational Chemistry Pub Date : 2010-09-23 DOI: 10.1002/9780470890905.CH6
Sophya Garashchuk, V. Rassolov, O. Prezhdo
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引用次数: 21
Molecular Detailed Simulations of Lipid Bilayers 脂质双层的分子详细模拟
Reviews in Computational Chemistry Pub Date : 2010-09-23 DOI: 10.1002/9780470890905.CH5
M. Berkowitz, J. Kindt
{"title":"Molecular Detailed Simulations of Lipid Bilayers","authors":"M. Berkowitz, J. Kindt","doi":"10.1002/9780470890905.CH5","DOIUrl":"https://doi.org/10.1002/9780470890905.CH5","url":null,"abstract":"","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"8 21","pages":"253-286"},"PeriodicalIF":0.0,"publicationDate":"2010-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50685562","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Computing Free Volume, Structural Order, and Entropy of Liquids and Glasses 计算液体和玻璃的自由体积、结构顺序和熵
Reviews in Computational Chemistry Pub Date : 2007-04-30 DOI: 10.1002/9780470189078.CH3
J. Mittal, W. P. Krekelberg, J. Errington, Thomas M Truskett
{"title":"Computing Free Volume, Structural Order, and Entropy of Liquids and Glasses","authors":"J. Mittal, W. P. Krekelberg, J. Errington, Thomas M Truskett","doi":"10.1002/9780470189078.CH3","DOIUrl":"https://doi.org/10.1002/9780470189078.CH3","url":null,"abstract":"","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"61 2","pages":"125-158"},"PeriodicalIF":0.0,"publicationDate":"2007-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470189078.CH3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50651534","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Transition metal and actinide containing systems studied with multiconfigurational quantum chemical methods 用多构型量子化学方法研究了含过渡金属和锕系元素的体系
Reviews in Computational Chemistry Pub Date : 2007-04-30 DOI: 10.1002/9780470189078.CH6
L. Gagliardi
{"title":"Transition metal and actinide containing systems studied with multiconfigurational quantum chemical methods","authors":"L. Gagliardi","doi":"10.1002/9780470189078.CH6","DOIUrl":"https://doi.org/10.1002/9780470189078.CH6","url":null,"abstract":"Ab initio quantum chemistry has advanced so far in the last 40 years that it now allows the study of molecular systems containing any atom in the Periodic Table. Transition metal and actinide compounds can be treated routinely, provided that electron correlation and relativistic effects are properly taken into account. Computational quantum chemical methods can be employed in combination with experiment, to predict a priori, to confirm, or eventually, to refine experimental results. These methods can also predict the existence of new species, which may eventually be made by experimentalists. This latter use of computational quantum chemistry is especially important when one considers experiments that are not easy to handle in a laboratory, as, for example, explosive or radioactive species. It is clear that a good understanding of the chemistry of such species can be useful in several areas of scientific and technological exploration. Quantum chemistry can model molecular properties and transformations, and in","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"58 11","pages":"249-284"},"PeriodicalIF":0.0,"publicationDate":"2007-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470189078.CH6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50651589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Variational Transition State Theory with Multidimensional Tunneling 多维隧穿的变分跃迁态理论
Reviews in Computational Chemistry Pub Date : 2007-02-14 DOI: 10.1002/9780470116449.CH3
A. Fernández-Ramos, Benjamin A. Ellingson, B. Garrett, D. Truhlar
{"title":"Variational Transition State Theory with Multidimensional Tunneling","authors":"A. Fernández-Ramos, Benjamin A. Ellingson, B. Garrett, D. Truhlar","doi":"10.1002/9780470116449.CH3","DOIUrl":"https://doi.org/10.1002/9780470116449.CH3","url":null,"abstract":"This review describes the application of variational transition state theory (VTST) to the calculation of chemical reaction rates. In 1985 two of us, together with Alan D. Isaacson, wrote a book chapter on this subject entitled “Generalized Transition State Theory” for the multi-volume series entitled Theory of Chemical Reaction Dynamics.1 Since that time, variational transition state theory has undergone important improvements due mainly to the ability of this theory to adapt to more challenging problems. For instance, the 1985 chapter mainly describes the application of VTST to bimolecular reactions involving 3–6 atoms, which were the state-of-the-art at that moment. The study of those reactions by VTST dynamics depended on the construction of an analytical potential energy surface (PES). Nowadays, thanks to the development of more efficient algorithms and more powerful computers, the situation is completely different, and most rate calculations are based on “on the fly” electronic structure calculations, which together with hybrid approaches, like combined quantum mechanical molecular mechanical methods (QM/MM), allow researchers to apply VTST to systems with hundreds or even tens of thousands of atoms. Three other major advances since 1985 are that transition state dividing surfaces can now be defined much more realistically, more accurate methodsmore » have been developed to include multidimensional quantum mechanical tunneling into VTST, and the theory has also been extended to reactions in condensed phases.« less","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"23 1","pages":"125-232"},"PeriodicalIF":0.0,"publicationDate":"2007-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470116449.CH3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"51147667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 214
Methods and Applications of Combined Quantum Mechanical and Molecular Mechanical Potentials 量子力学与分子力学联合势的方法与应用
Reviews in Computational Chemistry Pub Date : 2007-01-05 DOI: 10.1002/9780470125847.CH3
Jiali Gao
{"title":"Methods and Applications of Combined Quantum Mechanical and Molecular Mechanical Potentials","authors":"Jiali Gao","doi":"10.1002/9780470125847.CH3","DOIUrl":"https://doi.org/10.1002/9780470125847.CH3","url":null,"abstract":"","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"12 1","pages":"119-185"},"PeriodicalIF":0.0,"publicationDate":"2007-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470125847.CH3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"51148087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 168
Nonequilibrium Molecular Dynamics 非平衡分子动力学
Reviews in Computational Chemistry Pub Date : 2007-01-05 DOI: 10.1002/9780470125915.CH5
C. Mundy, S. Balasubramanian, K. Bagchi, M. Tuckerman, G. Martyna, M. Klein
{"title":"Nonequilibrium Molecular Dynamics","authors":"C. Mundy, S. Balasubramanian, K. Bagchi, M. Tuckerman, G. Martyna, M. Klein","doi":"10.1002/9780470125915.CH5","DOIUrl":"https://doi.org/10.1002/9780470125915.CH5","url":null,"abstract":"","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"14 1","pages":"291-397"},"PeriodicalIF":0.0,"publicationDate":"2007-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470125915.CH5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"51147825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 12
Sensitivity Analysis in Biomolecular Simulation 生物分子模拟中的敏感性分析
Reviews in Computational Chemistry Pub Date : 2007-01-05 DOI: 10.1002/9780470125892.CH6
Chung F. Wong, Thomas S. Thacher, H. Rabitz
{"title":"Sensitivity Analysis in Biomolecular Simulation","authors":"Chung F. Wong, Thomas S. Thacher, H. Rabitz","doi":"10.1002/9780470125892.CH6","DOIUrl":"https://doi.org/10.1002/9780470125892.CH6","url":null,"abstract":"","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"12 1","pages":"281-326"},"PeriodicalIF":0.0,"publicationDate":"2007-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470125892.CH6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"51147743","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Treatment of Counterions in Computer Simulations of DNA 计算机模拟DNA中反离子的处理
Reviews in Computational Chemistry Pub Date : 2007-01-05 DOI: 10.1002/9780470125885.CH6
G. Ravishanker, P. Auffinger, David R. Langley, B. Jayaram, Matthew A. Young, David L. Beveridge
{"title":"Treatment of Counterions in Computer Simulations of DNA","authors":"G. Ravishanker, P. Auffinger, David R. Langley, B. Jayaram, Matthew A. Young, David L. Beveridge","doi":"10.1002/9780470125885.CH6","DOIUrl":"https://doi.org/10.1002/9780470125885.CH6","url":null,"abstract":"","PeriodicalId":51148,"journal":{"name":"Reviews in Computational Chemistry","volume":"11 1","pages":"317-372"},"PeriodicalIF":0.0,"publicationDate":"2007-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/9780470125885.CH6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"51148179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 19
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