Journal of the American Medical Informatics Association最新文献

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A review of reinforcement learning for natural language processing and applications in healthcare. 回顾强化学习在自然语言处理和医疗保健中的应用。
IF 4.7 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-10-01 DOI: 10.1093/jamia/ocae215
Ying Liu, Haozhu Wang, Huixue Zhou, Mingchen Li, Yu Hou, Sicheng Zhou, Fang Wang, Rama Hoetzlein, Rui Zhang
{"title":"A review of reinforcement learning for natural language processing and applications in healthcare.","authors":"Ying Liu, Haozhu Wang, Huixue Zhou, Mingchen Li, Yu Hou, Sicheng Zhou, Fang Wang, Rama Hoetzlein, Rui Zhang","doi":"10.1093/jamia/ocae215","DOIUrl":"10.1093/jamia/ocae215","url":null,"abstract":"<p><strong>Importance: </strong>Reinforcement learning (RL) represents a pivotal avenue within natural language processing (NLP), offering a potent mechanism for acquiring optimal strategies in task completion. This literature review studies various NLP applications where RL has demonstrated efficacy, with notable applications in healthcare settings.</p><p><strong>Objectives: </strong>To systematically explore the applications of RL in NLP, focusing on its effectiveness in acquiring optimal strategies, particularly in healthcare settings, and provide a comprehensive understanding of RL's potential in NLP tasks.</p><p><strong>Materials and methods: </strong>Adhering to the PRISMA guidelines, an exhaustive literature review was conducted to identify instances where RL has exhibited success in NLP applications, encompassing dialogue systems, machine translation, question-answering, text summarization, and information extraction. Our methodological approach involves closely examining the technical aspects of RL methodologies employed in these applications, analyzing algorithms, states, rewards, actions, datasets, and encoder-decoder architectures.</p><p><strong>Results: </strong>The review of 93 papers yields insights into RL algorithms, prevalent techniques, emergent trends, and the fusion of RL methods in NLP healthcare applications. It clarifies the strategic approaches employed, datasets utilized, and the dynamic terrain of RL-NLP systems, thereby offering a roadmap for research and development in RL and machine learning techniques in healthcare. The review also addresses ethical concerns to ensure equity, transparency, and accountability in the evolution and application of RL-based NLP technologies, particularly within sensitive domains such as healthcare.</p><p><strong>Discussion: </strong>The findings underscore the promising role of RL in advancing NLP applications, particularly in healthcare, where its potential to optimize decision-making and enhance patient outcomes is significant. However, the ethical challenges and technical complexities associated with RL demand careful consideration and ongoing research to ensure responsible and effective implementation.</p><p><strong>Conclusions: </strong>By systematically exploring RL's applications in NLP and providing insights into technical analysis, ethical implications, and potential advancements, this review contributes to a deeper understanding of RL's role for language processing.</p>","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":4.7,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11413430/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142114241","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of digital tools to promote hospital quality and safety on adverse events after discharge. 促进医院质量与安全的数字化工具对出院后不良事件的影响。
IF 4.7 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-10-01 DOI: 10.1093/jamia/ocae176
Anant Vasudevan, Savanna Plombon, Nicholas Piniella, Alison Garber, Maria Malik, Erin O'Fallon, Abhishek Goyal, Esteban Gershanik, Vivek Kumar, Julie Fiskio, Cathy Yoon, Stuart R Lipsitz, Jeffrey L Schnipper, Anuj K Dalal
{"title":"Effect of digital tools to promote hospital quality and safety on adverse events after discharge.","authors":"Anant Vasudevan, Savanna Plombon, Nicholas Piniella, Alison Garber, Maria Malik, Erin O'Fallon, Abhishek Goyal, Esteban Gershanik, Vivek Kumar, Julie Fiskio, Cathy Yoon, Stuart R Lipsitz, Jeffrey L Schnipper, Anuj K Dalal","doi":"10.1093/jamia/ocae176","DOIUrl":"10.1093/jamia/ocae176","url":null,"abstract":"<p><strong>Objectives: </strong>Post-discharge adverse events (AEs) are common and heralded by new and worsening symptoms (NWS). We evaluated the effect of electronic health record (EHR)-integrated digital tools designed to promote quality and safety in hospitalized patients on NWS and AEs after discharge.</p><p><strong>Materials and methods: </strong>Adult general medicine patients at a community hospital were enrolled. We implemented a dashboard which clinicians used to assess safety risks during interdisciplinary rounds. Post-implementation patients were randomized to complete a discharge checklist whose responses were incorporated into the dashboard. Outcomes were assessed using EHR review and 30-day call data adjudicated by 2 clinicians and analyzed using Poisson regression. We conducted comparisons of each exposure on post-discharge outcomes and used selected variables and NWS as independent predictors to model post-discharge AEs using multivariable logistic regression.</p><p><strong>Results: </strong>A total of 260 patients (122 pre, 71 post [dashboard], 67 post [dashboard plus discharge checklist]) enrolled. The adjusted incidence rate ratios (aIRR) for NWS and AEs were unchanged in the post- compared to pre-implementation period. For patient-reported NWS, aIRR was non-significantly higher for dashboard plus discharge checklist compared to dashboard participants (1.23 [0.97,1.56], P = .08). For post-implementation patients with an AE, aIRR for duration of injury (>1 week) was significantly lower for dashboard plus discharge checklist compared to dashboard participants (0 [0,0.53], P < .01). In multivariable models, certain patient-reported NWS were associated with AEs (3.76 [1.89,7.82], P < .01).</p><p><strong>Discussion: </strong>While significant reductions in post-discharge AEs were not observed, checklist participants experiencing a post-discharge AE were more likely to report NWS and had a shorter duration of injury.</p><p><strong>Conclusion: </strong>Interventions designed to prompt patients to report NWS may facilitate earlier detection of AEs after discharge.</p><p><strong>Clinicaltrials.gov: </strong>NCT05232656.</p>","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":4.7,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11413445/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141629196","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diagnostic accuracy of deep learning using speech samples in depression: a systematic review and meta-analysis. 利用语音样本进行深度学习对抑郁症的诊断准确性:系统综述和荟萃分析。
IF 4.7 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-10-01 DOI: 10.1093/jamia/ocae189
Lidan Liu, Lu Liu, Hatem A Wafa, Florence Tydeman, Wanqing Xie, Yanzhong Wang
{"title":"Diagnostic accuracy of deep learning using speech samples in depression: a systematic review and meta-analysis.","authors":"Lidan Liu, Lu Liu, Hatem A Wafa, Florence Tydeman, Wanqing Xie, Yanzhong Wang","doi":"10.1093/jamia/ocae189","DOIUrl":"10.1093/jamia/ocae189","url":null,"abstract":"<p><strong>Objective: </strong>This study aims to conduct a systematic review and meta-analysis of the diagnostic accuracy of deep learning (DL) using speech samples in depression.</p><p><strong>Materials and methods: </strong>This review included studies reporting diagnostic results of DL algorithms in depression using speech data, published from inception to January 31, 2024, on PubMed, Medline, Embase, PsycINFO, Scopus, IEEE, and Web of Science databases. Pooled accuracy, sensitivity, and specificity were obtained by random-effect models. The diagnostic Precision Study Quality Assessment Tool (QUADAS-2) was used to assess the risk of bias.</p><p><strong>Results: </strong>A total of 25 studies met the inclusion criteria and 8 of them were used in the meta-analysis. The pooled estimates of accuracy, specificity, and sensitivity for depression detection models were 0.87 (95% CI, 0.81-0.93), 0.85 (95% CI, 0.78-0.91), and 0.82 (95% CI, 0.71-0.94), respectively. When stratified by model structure, the highest pooled diagnostic accuracy was 0.89 (95% CI, 0.81-0.97) in the handcrafted group.</p><p><strong>Discussion: </strong>To our knowledge, our study is the first meta-analysis on the diagnostic performance of DL for depression detection from speech samples. All studies included in the meta-analysis used convolutional neural network (CNN) models, posing problems in deciphering the performance of other DL algorithms. The handcrafted model performed better than the end-to-end model in speech depression detection.</p><p><strong>Conclusions: </strong>The application of DL in speech provided a useful tool for depression detection. CNN models with handcrafted acoustic features could help to improve the diagnostic performance.</p><p><strong>Protocol registration: </strong>The study protocol was registered on PROSPERO (CRD42023423603).</p>","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":4.7,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11413444/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141629195","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction to: Are medical history data fit for risk stratification of patients with chest pain in emergency care? Comparing data collected from patients using computerized history taking with data documented by physicians in the electronic health record in the CLEOS-CPDS prospective cohort study. 更正:病史数据是否适合对急诊胸痛患者进行风险分层?在 CLEOS-CPDS 前瞻性队列研究中,将使用电脑病史采集系统收集的患者数据与医生在电子健康记录中记录的数据进行比较。
IF 4.7 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-28 DOI: 10.1093/jamia/ocae252
{"title":"Correction to: Are medical history data fit for risk stratification of patients with chest pain in emergency care? Comparing data collected from patients using computerized history taking with data documented by physicians in the electronic health record in the CLEOS-CPDS prospective cohort study.","authors":"","doi":"10.1093/jamia/ocae252","DOIUrl":"https://doi.org/10.1093/jamia/ocae252","url":null,"abstract":"","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":4.7,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142331358","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Secure messaging telehealth billing in the digital age: moving beyond time-based metrics. 数字时代的安全信息远程医疗计费:超越基于时间的指标。
IF 4.7 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-26 DOI: 10.1093/jamia/ocae250
Dong-Gil Ko, Umberto Tachinardi, Eric J Warm
{"title":"Secure messaging telehealth billing in the digital age: moving beyond time-based metrics.","authors":"Dong-Gil Ko, Umberto Tachinardi, Eric J Warm","doi":"10.1093/jamia/ocae250","DOIUrl":"https://doi.org/10.1093/jamia/ocae250","url":null,"abstract":"<p><strong>Objective: </strong>We proposed adopting billing models for secure messaging (SM) telehealth services that move beyond time-based metrics, focusing on the complexity and clinical expertise involved in patient care.</p><p><strong>Materials and methods: </strong>We trained 8 classification machine learning (ML) models using providers' electronic health record (EHR) audit log data for patient-initiated non-urgent messages. Mixed effect modeling (MEM) analyzed significance.</p><p><strong>Results: </strong>Accuracy and area under the receiver operating characteristics curve scores generally exceeded 0.85, demonstrating robust performance. MEM showed that knowledge domains significantly influenced SM billing, explaining nearly 40% of the variance.</p><p><strong>Discussion: </strong>This study demonstrates that ML models using EHR audit log data can improve and predict billing in SM telehealth services, supporting billing models that reflect clinical complexity and expertise rather than time-based metrics.</p><p><strong>Conclusion: </strong>Our research highlights the need for SM billing models beyond time-based metrics, using EHR audit log data to capture the true value of clinical work.</p>","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":4.7,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142331360","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Can GPT-3.5 generate and code discharge summaries? GPT-3.5 能否生成出院摘要并对其进行编码?
IF 6.4 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-14 DOI: 10.1093/jamia/ocae132
Matúš Falis, Aryo Pradipta Gema, Hang Dong, Luke Daines, Siddharth Basetti, Michael Holder, Rose S Penfold, Alexandra Birch, Beatrice Alex
{"title":"Can GPT-3.5 generate and code discharge summaries?","authors":"Matúš Falis, Aryo Pradipta Gema, Hang Dong, Luke Daines, Siddharth Basetti, Michael Holder, Rose S Penfold, Alexandra Birch, Beatrice Alex","doi":"10.1093/jamia/ocae132","DOIUrl":"https://doi.org/10.1093/jamia/ocae132","url":null,"abstract":"Objectives The aim of this study was to investigate GPT-3.5 in generating and coding medical documents with International Classification of Diseases (ICD)-10 codes for data augmentation on low-resource labels. Materials and Methods Employing GPT-3.5 we generated and coded 9606 discharge summaries based on lists of ICD-10 code descriptions of patients with infrequent (or generation) codes within the MIMIC-IV dataset. Combined with the baseline training set, this formed an augmented training set. Neural coding models were trained on baseline and augmented data and evaluated on an MIMIC-IV test set. We report micro- and macro-F1 scores on the full codeset, generation codes, and their families. Weak Hierarchical Confusion Matrices determined within-family and outside-of-family coding errors in the latter codesets. The coding performance of GPT-3.5 was evaluated on prompt-guided self-generated data and real MIMIC-IV data. Clinicians evaluated the clinical acceptability of the generated documents. Results Data augmentation results in slightly lower overall model performance but improves performance for the generation candidate codes and their families, including 1 absent from the baseline training data. Augmented models display lower out-of-family error rates. GPT-3.5 identifies ICD-10 codes by their prompted descriptions but underperforms on real data. Evaluators highlight the correctness of generated concepts while suffering in variety, supporting information, and narrative. Discussion and Conclusion While GPT-3.5 alone given our prompt setting is unsuitable for ICD-10 coding, it supports data augmentation for training neural models. Augmentation positively affects generation code families but mainly benefits codes with existing examples. Augmentation reduces out-of-family errors. Documents generated by GPT-3.5 state prompted concepts correctly but lack variety, and authenticity in narratives.","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":6.4,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142256637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Longitudinal study of the manifestations and mechanisms of technology-related prescribing errors in pediatrics 儿科技术相关处方错误的表现和机制纵向研究
IF 6.4 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-12 DOI: 10.1093/jamia/ocae218
Magdalena Z Raban, Erin Fitzpatrick, Alison Merchant, Bayzidur Rahman, Tim Badgery-Parker, Ling Li, Melissa T Baysari, Peter Barclay, Michael Dickinson, Virginia Mumford, Johanna I Westbrook
{"title":"Longitudinal study of the manifestations and mechanisms of technology-related prescribing errors in pediatrics","authors":"Magdalena Z Raban, Erin Fitzpatrick, Alison Merchant, Bayzidur Rahman, Tim Badgery-Parker, Ling Li, Melissa T Baysari, Peter Barclay, Michael Dickinson, Virginia Mumford, Johanna I Westbrook","doi":"10.1093/jamia/ocae218","DOIUrl":"https://doi.org/10.1093/jamia/ocae218","url":null,"abstract":"Objectives To examine changes in technology-related errors (TREs), their manifestations and underlying mechanisms at 3 time points after the implementation of computerized provider order entry (CPOE) in an electronic health record; and evaluate the clinical decision support (CDS) available to mitigate the TREs at 5-years post-CPOE. Materials and Methods Prescribing errors (n = 1315) of moderate, major, or serious potential harm identified through review of 35 322 orders at 3 time points (immediately, 1-year, and 4-years post-CPOE) were assessed to identify TREs at a tertiary pediatric hospital. TREs were coded using the Technology-Related Error Mechanism classification. TRE rates, percentage of prescribing errors that were TREs, and mechanism rates were compared over time. Each TRE was tested in the CPOE 5-years post-implementation to assess the availability of CDS to mitigate the error. Results TREs accounted for 32.5% (n = 428) of prescribing errors; an adjusted rate of 1.49 TREs/100 orders (95% confidence interval [CI]: 1.06, 1.92). At 1-year post-CPOE, the rate of TREs was 40% lower than immediately post (incident rate ratio [IRR]: 0.60; 95% CI: 0.41, 0.89). However, at 4-years post, the TRE rate was not significantly different to baseline (IRR: 0.80; 95% CI: 0.59, 1.08). “New workflows required by the CPOE” was the most frequent TRE mechanism at all time points. CDS was available to mitigate 32.7% of TREs. Discussion In a pediatric setting, TREs persisted 4-years post-CPOE with no difference in the rate compared to immediately post-CPOE. Conclusion Greater attention is required to address TREs to enhance the safety benefits of systems.","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":6.4,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142218469","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Electronic health record system use and documentation burden of acute and critical care nurse clinicians: a mixed-methods study 电子健康记录系统的使用与急危重症护理临床护士的记录负担:一项混合方法研究
IF 6.4 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-12 DOI: 10.1093/jamia/ocae239
Hwayoung Cho, Oliver T Nguyen, Michael Weaver, Jennifer Pruitt, Cassie Marcelle, Ramzi G Salloum, Gail Keenan
{"title":"Electronic health record system use and documentation burden of acute and critical care nurse clinicians: a mixed-methods study","authors":"Hwayoung Cho, Oliver T Nguyen, Michael Weaver, Jennifer Pruitt, Cassie Marcelle, Ramzi G Salloum, Gail Keenan","doi":"10.1093/jamia/ocae239","DOIUrl":"https://doi.org/10.1093/jamia/ocae239","url":null,"abstract":"Objectives Examine electronic health record (EHR) use and factors contributing to documentation burden in acute and critical care nurses. Materials and Methods A mixed-methods design was used guided by Unified Theory of Acceptance and Use of Technology. Key EHR components included, Flowsheets, Medication Administration Records (MAR), Care Plan, Notes, and Navigators. We first identified 5 units with the highest documentation burden in 1 university hospital through EHR log file analyses. Four nurses per unit were recruited and engaged in interviews and surveys designed to examine their perceptions of ease of use and usefulness of the 5 EHR components. A combination of inductive/deductive coding was used for qualitative data analysis. Results Nurses acknowledged the importance of documentation for patient care, yet perceived the required documentation as burdensome with levels varying across the 5 components. Factors contributing to burden included non-EHR issues (patient-to-nurse staffing ratios; patient acuity; suboptimal time management) and EHR usability issues related to design/features. Flowsheets, Care Plan, and Navigators were found to be below acceptable usability and contributed to more burden compared to MAR and Notes. The most troublesome EHR usability issues were data redundancy, poor workflow navigation, and cumbersome data entry based on unit type. Discussion Overall, we used quantitative and qualitative data to highlight challenges with current nursing documentation features in the EHR that contribute to documentation burden. Differences in perceived usability across the EHR documentation components were driven by multiple factors, such as non-alignment with workflows and amount of duplication of prior data entries. Nurses offered several recommendations for improving the EHR, including minimizing redundant or excessive data entry requirements, providing visual cues (eg, clear error messages, highlighting areas where missing or incorrect information are), and integrating decision support. Conclusion Our study generated evidence for nurse EHR use and specific documentation usability issues contributing to burden. Findings can inform the development of solutions for enhancing multi-component EHR usability that accommodates the unique workflow of nurses. Documentation strategies designed to improve nurse working conditions should include non-EHR factors as they also contribute to documentation burden.","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":6.4,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142218486","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
"Goldmine" or "big mess"? An interview study on the challenges of designing, operating, and ensuring the durability of Clinical Data Warehouses in France and Belgium. "金矿 "还是 "烂摊子"?关于法国和比利时临床数据仓库的设计、运行和耐用性挑战的访谈研究。
IF 6.4 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-12 DOI: 10.1093/jamia/ocae244
Sonia Priou,Emmanuelle Kempf,Marija Jankovic,Guillaume Lamé
{"title":"\"Goldmine\" or \"big mess\"? An interview study on the challenges of designing, operating, and ensuring the durability of Clinical Data Warehouses in France and Belgium.","authors":"Sonia Priou,Emmanuelle Kempf,Marija Jankovic,Guillaume Lamé","doi":"10.1093/jamia/ocae244","DOIUrl":"https://doi.org/10.1093/jamia/ocae244","url":null,"abstract":"OBJECTIVESClinical Data Warehouses (CDW) are the designated infrastructures to enable access and analysis of large quantities of electronic health record data. Building and managing such systems implies extensive \"data work\" and coordination between multiple stakeholders. Our study focuses on the challenges these stakeholders face when designing, operating, and ensuring the durability of CDWs for research.MATERIALS AND METHODSWe conducted semistructured interviews with 21 professionals working with CDWs from France and Belgium. All interviews were recorded, transcribed verbatim, and coded inductively.RESULTSPrompted by the AI boom, healthcare institutions launched initiatives to repurpose data they were generating for care without a clear vision of how to generate value. Difficulties in operating CDWs arose quickly, strengthened by the multiplicity and diversity of stakeholders involved and grand discourses on the possibilities of CDWs, disjointed from their actual capabilities. Without proper management of the information flows, stakeholders struggled to build a shared vision. This was evident in our interviewees' contrasting appreciations of what mattered most to ensure data quality. Participants explained they struggled to manage knowledge inside and across institutions, generating knowledge loss, repeated mistakes, and impeding progress locally and nationally.DISCUSSION AND CONCLUSIONManagement issues strongly affect the deployment and operation of CDWs. This may stem from a simplistic linear vision of how this type of infrastructure operates. CDWs remain promising for research, and their design, implementation, and operation require careful management if they are to be successful. Building on innovation management, complex systems, and organizational learning knowledge will help.","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":6.4,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142256638","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Experiences in providing a community educational resource for the All of Us Researcher Workbench 为全民研究员工作台提供社区教育资源的经验
IF 6.4 2区 医学
Journal of the American Medical Informatics Association Pub Date : 2024-09-12 DOI: 10.1093/jamia/ocae226
Deborah I Ritter, Jinyoung Byun, Jun Wang, Stephen Richards, Pamela N Luna, LaTerrica Williams, Julie R Coleman, Jasmine N Baker, Shamika Ketkar, Ashley M Butler, Latanya Hammonds-Odie, Elizabeth G Atkinson, Kim C Worley, Debra D Murray, Brendan Lee, Steven E Scherer
{"title":"Experiences in providing a community educational resource for the All of Us Researcher Workbench","authors":"Deborah I Ritter, Jinyoung Byun, Jun Wang, Stephen Richards, Pamela N Luna, LaTerrica Williams, Julie R Coleman, Jasmine N Baker, Shamika Ketkar, Ashley M Butler, Latanya Hammonds-Odie, Elizabeth G Atkinson, Kim C Worley, Debra D Murray, Brendan Lee, Steven E Scherer","doi":"10.1093/jamia/ocae226","DOIUrl":"https://doi.org/10.1093/jamia/ocae226","url":null,"abstract":"Objective Educational offerings to fill the bioinformatics knowledge gap are a key component to enhancing access and use of health data from the All of Us Research Program. We developed a Train the Trainer-based, innovative training series including project-based learning, modular on-demand demonstrations, and unstructured tutorial time as a model for educational engagement in the All of Us community. Materials and Methods We highlight our training modules and content, with training survey data informing cycles of development in the creation of a 6-module training series with modular demonstrations. Results We have conducted 2 public iterations of the Train the Trainer (Tx3) Series based on survey feedback while training over 300 registered researchers to access and analyze data on the All of Us Researcher Workbench. Discussion and Conclusion Future directions of the Tx3 Series include enhanced focus on project-based learning and learner requests for modularity and asynchronous materials access.","PeriodicalId":50016,"journal":{"name":"Journal of the American Medical Informatics Association","volume":null,"pages":null},"PeriodicalIF":6.4,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142218467","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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