Mycosphere最新文献_第10页

Endophytic seed mycobiome of six sorghum (Sorghum bicolor) cultivars from commercial seedlots using an Illumina sequencing approach 利用Illumina测序方法对6个高粱(高粱双色)品种的种子内生菌群进行分析

IF 14.6 1区生物学

Mycosphere Pub Date : 2019-01-01 DOI: 10.5943/mycosphere/10/1/16

T. Kinge

{"title":"Endophytic seed mycobiome of six sorghum (Sorghum bicolor) cultivars from commercial seedlots using an Illumina sequencing approach","authors":"T. Kinge","doi":"10.5943/mycosphere/10/1/16","DOIUrl":"https://doi.org/10.5943/mycosphere/10/1/16","url":null,"abstract":"Pathogen-free seeds are important for the establishment of young seedlings, prevention of health problems upon consumption by animals and livestock, and inadvertent movement of pathogens into and out of countries. However, testing for the presence of fungi, including pathogens from seeds is a time consuming and difficult process. In this study, we characterized the seed fungal microbiome (mycobiome) of six commercial sorghum cultivars from South Africa using a deep amplicon next generation sequencing approach based on the Internal Transcribed Spacer (ITS) region of the ribosomal operon. Sorghum is the fifth most important crop in the world, and widely used by African farmers. We found that the fungi present in each of the seedlots were similar to those reported by cultural studies. By comparing phylotypes of certain key families and genera to phylotypes used in established phylogenies and reputed sequences from public databases, the diagnostic value of the NGS method was also investigated. We showed that a number of molecular operational taxonomic units (MOTUs) could be identified at the species level and established that certain known pathogens are not present in the tested seeds, for instance in the Aspergillus group. Other groups could not be identified, not even to genus level. While acknowledging the shortcomings of using partial ITS data, we demonstrated that deep amplicon sequencing is a valuable diagnostic tool for seed disease control and prevention in some cases.","PeriodicalId":48718,"journal":{"name":"Mycosphere","volume":"1 1","pages":""},"PeriodicalIF":14.6,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71232034","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 11

Three new species of Neocamarosporium isolated from saline environments: N. aestuarinum sp. nov., N. endophyticum sp. nov. and N. halimiones sp. nov. 从生理盐水环境中分离到三个新的新卡马孢属植物：N.aestuarinum sp.nov.，N.内生菌sp.nov.和N.halimiones sp.nov。

IF 14.6 1区生物学

Mycosphere Pub Date : 2019-01-01 DOI: 10.5943/mycosphere/10/1/11

M. Gonçalves

引用次数: 15

A worldwide list of endophytic fungi with notes on ecology and diversity 世界范围内的内生真菌目录，包括生态学和多样性注释

IF 14.6 1区生物学

Mycosphere Pub Date : 2019-01-01 DOI: 10.5943/mycosphere/10/1/19

M. Rashmi

引用次数: 104

A review of the polysaccharide, protein and selected nutrient content of Auricularia, and their potential pharmacological value 综述了木耳的多糖、蛋白质和部分营养成分及其潜在的药理价值

IF 14.6 1区生物学

Mycosphere Pub Date : 2019-01-01 DOI: 10.5943/MYCOSPHERE/10/1/10

Asanka R. Bandara, S. Rapior, P. Mortimer, Pattana Kakumyan, K. Hyde, Jian-chu Xu

{"title":"A review of the polysaccharide, protein and selected nutrient content of Auricularia, and their potential pharmacological value","authors":"Asanka R. Bandara, S. Rapior, P. Mortimer, Pattana Kakumyan, K. Hyde, Jian-chu Xu","doi":"10.5943/MYCOSPHERE/10/1/10","DOIUrl":"https://doi.org/10.5943/MYCOSPHERE/10/1/10","url":null,"abstract":"Auricularia is a key genus among edible macrofungi, sourced as either wild or cultivated mushrooms. Auricularia species are utilized as nutrient-rich foods and medicinal resources, with particular prominence in Traditional Asian Medicine. Cultivated Auricularia species can be grown under a wide range of conditions, allowing for production volumes worldwide. Although Auricularia species are used predominantly within the food industry, there is strong potential for their use in the production of therapeutic drugs, thus making it necessary to identify relevant bioactive compounds and further our understanding of its pharmacological properties. Carbohydrates are the major nutritional constituent of edible Auricularia species in addition to proteins, fat, fibre, ashes vitamins and minerals. This review discusses polysaccharides as one of the major active compounds found in edible Auricularia species in relation to their nutritional value, extraction methods, and pharmacological properties. Current methods of evaluating the pharmacological effects of compounds derived from Auricularia include in vitro assays, in vivo animal models, as well as several human clinical trials. Potential medical applications for these compounds include the production of novel therapeutic drugs for treating diseases such as cancer, diabetes, and cardiovascular disorders.","PeriodicalId":48718,"journal":{"name":"Mycosphere","volume":"16 1","pages":""},"PeriodicalIF":14.6,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71231648","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 37

Confirming the phylogenetic position of the genus Muscodor and the description of a new Muscodor species 确认麝香属的系统发育地位及一新种的描述

IF 14.6 1区生物学

Mycosphere Pub Date : 2019-01-01 DOI: 10.5943/mycosphere/10/1/2

J. Chen

引用次数: 13

Lignicolous freshwater fungi from China II: Novel Distoseptispora (Distoseptisporaceae) species from northwestern Yunnan Province and a suggested unified method for studying lignicolous freshwater fungi 中国木质素淡水真菌Ⅱ：滇西北地区的一个新的Distoseptispora（distoseptisporace）种及建议的木质素淡水菌统一研究方法

IF 14.6 1区生物学

Mycosphere Pub Date : 2018-05-21 DOI: 10.5943/MYCOSPHERE/9/3/2

Zong-Long Luo, K. Hyde, Jiankui Liu, D. Bhat, D. Bao, Wenlian Li, H. Su

{"title":"Lignicolous freshwater fungi from China II: Novel Distoseptispora (Distoseptisporaceae) species from northwestern Yunnan Province and a suggested unified method for studying lignicolous freshwater fungi","authors":"Zong-Long Luo, K. Hyde, Jiankui Liu, D. Bhat, D. Bao, Wenlian Li, H. Su","doi":"10.5943/MYCOSPHERE/9/3/2","DOIUrl":"https://doi.org/10.5943/MYCOSPHERE/9/3/2","url":null,"abstract":"This is the second in a series of papers on lignicolous freshwater fungi from China. In this paper, eight fresh collections of asexual morphs of Distoseptispora, isolated from submerged wood in northwestern Yunnan Province, China, are characterized based on morphological characters and phylogenetic analyses of combined ITS, LSU, RPB2 and TEF1α sequence data. Four new Distoseptispora species (D. cangshanensis, D. obpyriformis, D. rostrata and D. submersa) are introduced, described and illustrated, with notes on their taxonomy and phylogeny. Newly generated molecular data of Distoseptispora fluminicola is also provided. We also provide a unified method for studying lignicolous freshwater fungi to standardize the findings of future Asian studies. Key word – Asexual fungi – Methodology – Phylogeny – Sordariomycetes – Taxonomy Introduction Lignicolous freshwater fungi play an important role in nutrient and carbon cycling, biological diversity and ecosystem functioning in freshwater ecosystems (Palmer et al. 1997, Yuen et al. 1998, Bucher et al. 2004, Vijaykrishna et al. 2005, Hyde et al. 2016a). There have been some studies on lignicolous freshwater fungi in Yunnan Province, China (Cai et al. 2002, Luo et al. 2004, 2016, 2017, 2018, Liu et al. 2015, Su et al. 2015, 2016, Zhu et al. 2016) and in this paper, we deal with the genus Distoseptispora K.D. Hyde, McKenzie & Maharachch. which belongs to Distoseptisporaceae, Sordariomycetes. The family Distoseptisporaceae K.D. Hyde & McKenzie was introduced by Su et al. (2016) with a single genus Distoseptispora to accommodate two Sporidesmium-like species. Yang et al. (2018) emended the description of the genus Distoseptispora which is characterized by Mycosphere 9(3): 444–461 (2018) www.mycosphere.org ISSN 2077 7019","PeriodicalId":48718,"journal":{"name":"Mycosphere","volume":"9 1","pages":"444-461"},"PeriodicalIF":14.6,"publicationDate":"2018-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41559307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 53

Myxomycete diversity in Costa Rica 哥斯达黎加的黏菌多样性

IF 14.6 1区生物学

Mycosphere Pub Date : 2018-04-01 DOI: 10.5943/MYCOSPHERE/9/2/6

C. Alvarado, Pedro Rojas Camacho, C. Rodríguez

引用次数: 7

Salt-tolerant chitin and chitosan modifying enzymes from Talaromyces stipitatus, a mangrove endophyte 红树林内生真菌Talaromyces stipitatus的耐盐几丁质和壳聚糖修饰酶

IF 14.6 1区生物学

Mycosphere Pub Date : 2018-03-21 DOI: 10.5943/MYCOSPHERE/9/2/5

Rajamani Thavamani, T. S. Murali

引用次数: 14

Variation in the ability of fungi in the extrafloral nectar of Mallotus paniculatus to attract ants as plant defenders 马蹄莲花外花蜜中真菌吸引蚂蚁作为植物防御者能力的变化

IF 14.6 1区生物学

Mycosphere Pub Date : 2018-03-08 DOI: 10.5943/MYCOSPHERE/9/2/2

P. Sun, P. H. Chen, Wei-Jiun Lin, Chung-Chi Lin, Jui-Yu Chou

{"title":"Variation in the ability of fungi in the extrafloral nectar of Mallotus paniculatus to attract ants as plant defenders","authors":"P. Sun, P. H. Chen, Wei-Jiun Lin, Chung-Chi Lin, Jui-Yu Chou","doi":"10.5943/MYCOSPHERE/9/2/2","DOIUrl":"https://doi.org/10.5943/MYCOSPHERE/9/2/2","url":null,"abstract":"Many plant–ant interactions are considered mutualisms. In Mallotus paniculatus (Euphorbiaceae) (also known as Turn-in-the-wind), the extrafloral nectaries (EFNs) on the base of the leaf laminas can produce sugar-rich secretions to attract ants as effective agents against herbivores or plant competitors. Growing evidence reveals that microorganisms are important “hidden players” in insect–plant interactions. Understanding which microorganisms act as such third-party species and how they operate is a major challenge in the study of mutualistic interactions. In this study, we showed that two dominant fungal species, the yeast Jaminaea angkorensis and the hyphal fungus Gibellulopsis nigrescens both from EFNs and the interiors of bodies of the ant Pheidole megacephala (Formicidae) on their own were sufficient for ant attraction. Our results also revealed that different fungal species on the host plant influenced ant behavior differently. These results can be applied in agriculture to increase ants or herbivore predators to protect plant hosts using fungal baits. Moreover, they indicate that fungal odors represent the critical signal to establish the plant–microbe–insect interactions. The traditional plant– defender concept must be updated to include the role of microorganisms.","PeriodicalId":48718,"journal":{"name":"Mycosphere","volume":"9 1","pages":"178-188"},"PeriodicalIF":14.6,"publicationDate":"2018-03-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45178295","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 2

New species and records of Bipolaris and Curvularia from Thailand 标题泰国双星属和曲孢属新种及记录

IF 14.6 1区生物学

Mycosphere Pub Date : 2017-10-18 DOI: 10.5943/MYCOSPHERE/8/9/11

Y. Marin-Felix, C. Senwanna, R. Cheewangkoon, P. Crous

引用次数: 45