Molecular Syndromology最新文献

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Recurrent Mutation (p.Arg718Pro) in the COMP Gene with Clinical Heterogeneity of Pseudoachondroplasia. COMP基因的复发突变(p.Arg718Pro)与假性软骨发育不全的临床异质性。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-08-01 Epub Date: 2023-03-29 DOI: 10.1159/000528980
Jaime Toral López, Luz María González Huerta
{"title":"Recurrent Mutation (p.Arg718Pro) in the <i>COMP</i> Gene with Clinical Heterogeneity of Pseudoachondroplasia.","authors":"Jaime Toral López, Luz María González Huerta","doi":"10.1159/000528980","DOIUrl":"10.1159/000528980","url":null,"abstract":"<p><strong>Introduction: </strong>Pseudoachondroplasia (PSACH) and multiple epiphyseal dysplasia (MED) are allelic and caused by mutations in the <i>COMP</i> gene. Other mutations in the genes <i>MMP13</i>, <i>AIFM1</i>, <i>B3GALT6</i>, <i>MATN3</i>, <i>COL9A1</i>, <i>COL9A2</i>, <i>COL9A3</i>, and <i>SLC26A2</i> have also been associated with evidence of dysplasia in the epiphysis, metaphysis, and spine.</p><p><strong>Case presentation: </strong>We report on the first Mexican patient diagnosed with PSACH. The diagnosis was confirmed by identifying a recurrent heterozygous mutation c.2153G>C (p.Arg718Pro) in the <i>COMP</i> gene using whole-exome sequencing.</p><p><strong>Discussion: </strong>The anterior spindle-shaped vertebral bodies and severe short stature are not observed in patients carrying p.Arg718Pro, identifying another amino acid site associated with clinical heterogeneity. Reporting new cases with clinical heterogeneity in terms of phenotype plays a crucial role in understanding PSACH and MED pathogenesis. The most important aspect of this presentation is providing a new perspective on a recognized clinical scenario, thus setting the standard for better genetic counseling.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 4","pages":"341-346"},"PeriodicalIF":1.1,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521230/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41116024","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pure Interstitial Trisomy 11q Arising from a Nonrecurrent 11q13.1q22.3 Mosaic Intrachromosomal Duplication in a Patient with Craniofacial Dysmorphism and Genital Anomalies. 一名患有颅面畸形和生殖器异常的患者非复发性11q13.1q22.3马赛克染色体内重复引起的单纯性间质性11q三体性。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-08-01 Epub Date: 2023-03-01 DOI: 10.1159/000528472
Daniel Martínez Anaya, María Del Rocío Juárez-Velázquez, Sinuhé Reyes Ruvalcaba, María Del Pilar Navarrete-Meneses, Consuelo Salas Labadía, Esther Lieberman Hernández, Patricia Pérez-Vera
{"title":"Pure Interstitial Trisomy 11q Arising from a Nonrecurrent 11q13.1q22.3 Mosaic Intrachromosomal Duplication in a Patient with Craniofacial Dysmorphism and Genital Anomalies.","authors":"Daniel Martínez Anaya, María Del Rocío Juárez-Velázquez, Sinuhé Reyes Ruvalcaba, María Del Pilar Navarrete-Meneses, Consuelo Salas Labadía, Esther Lieberman Hernández, Patricia Pérez-Vera","doi":"10.1159/000528472","DOIUrl":"10.1159/000528472","url":null,"abstract":"<p><strong>Introduction: </strong>The pure interstitial trisomy 11q11q23.2 is an uncommon genomic disorder associated with nonrecurrent intrachromosomal duplications. The phenotype is characterized by intellectual disability and craniofacial abnormalities. Given their uncommonness, a comprehensive genotype-phenotype correlation has not fully been defined.</p><p><strong>Case presentation: </strong>We report the clinical and cytogenomic characterization of a 5-year-old boy with intellectual disability, psychomotor retardation, craniofacial dysmorphism, genital anomalies, and pure interstitial trisomy 11q arising from a nonrecurrent 11q13.1q22.3 intrachromosomal duplication in a high-mosaic state (>80%). The duplicated chromosome was characterized by cytogenetics, multicolor banding FISH, and SNP array. We demonstrated the wide mosaic distribution of the 11q duplication by interphase FISH in tissues from different embryonic germ layers. The duplication involves a copy number gain of 45.3 Mb containing 22 dosage-sensitive genes. We confirmed the overexpression of dosage-sensitive genes along the duplicated region using RT-qPCR.</p><p><strong>Discussion: </strong>Only 8 patients have been described. Our patient shares clinical features with previous reports but differs from them by the presence of genital anomalies. We provide a detailed clinical review and an accurate genotype-phenotype correlation and propose <i>PC</i>, <i>NDUFV1</i>, <i>FGF3</i>, <i>FGF4</i>, and <i>DHCR7</i> as dosage-sensitive genes with a possible role in the clinical spectrum of our patient; however, expression changes of <i>FGF3/4</i> were not detected since they must be regulated in a spatiotemporal way. This patient contributes to the accurate description of the pure interstitial trisomy 11q. Future reports could continue to delineate the description, considering the relationship between the chromosome segment and the genes involved.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 4","pages":"310-321"},"PeriodicalIF":1.1,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521253/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41133931","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Expanding the p.(Arg85Trp) Variant-Specific Phenotype of HNF4A: Features of Glycogen Storage Disease, Liver Cirrhosis, Impaired Mitochondrial Function, and Glomerular Changes. 扩展p.HNF4A的(Arg85Trp)变体特异性表型:糖原储存病、肝硬化、线粒体功能受损和肾小球变化的特征。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-08-01 Epub Date: 2023-04-12 DOI: 10.1159/000529306
Mara Grassi, Bernard Laubscher, Amit V Pandey, Sibylle Tschumi, Franziska Graber, André Schaller, Marco Janner, Daniel Aeberli, Ekkehard Hewer, Jean-Marc Nuoffer, Matthias Gautschi
{"title":"Expanding the p.(Arg85Trp) Variant-Specific Phenotype of HNF4A: Features of Glycogen Storage Disease, Liver Cirrhosis, Impaired Mitochondrial Function, and Glomerular Changes.","authors":"Mara Grassi, Bernard Laubscher, Amit V Pandey, Sibylle Tschumi, Franziska Graber, André Schaller, Marco Janner, Daniel Aeberli, Ekkehard Hewer, Jean-Marc Nuoffer, Matthias Gautschi","doi":"10.1159/000529306","DOIUrl":"10.1159/000529306","url":null,"abstract":"<p><strong>Introduction: </strong>The p.(Arg85Trp) variant-specific phenotype of hepatocyte nuclear factor 4 alpha shows a complex clinical picture affecting three different organ systems and their corresponding metabolisms. Little is known about the molecular mechanisms involved and their relationship with the diverse symptoms seen in the context of this specific variant. Here, we present data of a new patient that expand the clinical phenotype, suggesting possible disease mechanisms.</p><p><strong>Case presentation: </strong>Clinical data were extracted from the patient's charts. The liver, kidney, and muscle were analyzed with routine histology and electron microscopy. Mitochondrial function was assessed by respirometric analyses and enzymatic activity assays. Structure and sequence analyses of this specific variant were investigated by in silico analyses. Our patient showed the known features of the variant-specific phenotype, including macrosomia, congenital hyperinsulinism, transient hepatomegaly, and renal Fanconi syndrome. In addition to that, she showed liver cirrhosis, chronic kidney failure, and altered mitochondrial morphology and function. The clinical and biochemical phenotype had features of a new type of glycogen storage disease.</p><p><strong>Discussion: </strong>This case expands the p.(Arg85Trp) variant-specific phenotype. Possible pathomechanistic explanations for the documented multiorgan involvement and changes of symptoms and signs during development of this ultra-rare but instructive disorder are discussed.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 4","pages":"347-361"},"PeriodicalIF":1.1,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521240/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41148917","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Clinical and Genetic Characteristics of Patients with Unexplained Intellectual Disability/Developmental Delay without Epilepsy. 不明原因智力残疾/发育迟缓非癫痫患者的临床和遗传特征。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-03-14 DOI: 10.1159/000529018
Hamide Betul Gerik-Celebi, Hilal Aydin, Hilmi Bolat, Gul Unsel-Bolat
{"title":"Clinical and Genetic Characteristics of Patients with Unexplained Intellectual Disability/Developmental Delay without Epilepsy.","authors":"Hamide Betul Gerik-Celebi, Hilal Aydin, Hilmi Bolat, Gul Unsel-Bolat","doi":"10.1159/000529018","DOIUrl":"10.1159/000529018","url":null,"abstract":"<p><strong>Introduction: </strong>Global developmental delay (DD), intellectual disability (ID), and autism spectrum disorder (ASD) are mainly evaluated under the neurodevelopmental disorder framework. In this study, we aimed to determine the genetic diagnosis yield using step-by-step genetic analysis in 38 patients with unexplained ID/DD and/or ASD.</p><p><strong>Methods: </strong>In 38 cases (27 male, 11 female) with unexplained ID/DD and/or ASD, chromosomal microarray (CMA) analysis, clinical exome sequencing (CES), and whole-exome sequencing (WES) analysis were applied, respectively.</p><p><strong>Results: </strong>We found a diagnostic rate of only CMA analysis as 21% (8/38) presenting 8 pathogenic and likely pathogenic CNVs. The rate of patients diagnosed with CES/WES methods was 32.2% (10/31). When all pathogenic and likely pathogenic variants were evaluated, the diagnosis rate was 44.7% (17/38). A dual diagnosis was obtained in a case with 16p11.2 microduplication and de novo SNV. We identified eight novel variants: <i>TUBA1A</i> (c.787C>G), <i>TMEM63A</i> (c.334-2A>G), <i>YY1AP1</i> (c.2051_2052del), <i>ABCA13</i> (c.12064C>T), <i>ABCA13</i> (c.13187G>A), <i>USP9X</i> (c.1189T>C), <i>ANKRD17</i> (c.328_330dup), and <i>GRIA4</i> (c.17G>A).</p><p><strong>Conclusion: </strong>We present diagnostic rates of a complementary approach to genetic analysis (CMA, CES, and WES). The combined use of genetic analysis methods in unexplained ID/DD and/or ASD cases has contributed significantly to diagnosis rates. Also, we present detailed clinical characteristics to improve genotype-phenotype correlation in the literature for rare and novel variants.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"208-218"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267527/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9646588","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Mutated Transcripts of ZEB2 Do Not Undergo Nonsense-Mediated Decay in Mowat-Wilson Syndrome. 在莫瓦特-威尔逊综合征中,突变的ZEB2转录本不经历无意义介导的衰变。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-02-20 DOI: 10.1159/000528769
Naz Güleray Lafcı, Beren Karaosmanoglu, Ekim Z Taskiran, Pelin Ozlem Simsek-Kiper, Gülen Eda Utine
{"title":"Mutated Transcripts of <i>ZEB2</i> Do Not Undergo Nonsense-Mediated Decay in Mowat-Wilson Syndrome.","authors":"Naz Güleray Lafcı, Beren Karaosmanoglu, Ekim Z Taskiran, Pelin Ozlem Simsek-Kiper, Gülen Eda Utine","doi":"10.1159/000528769","DOIUrl":"10.1159/000528769","url":null,"abstract":"<p><strong>Introduction: </strong>Mowat-Wilson syndrome (MWS) is an autosomal-dominant complex developmental disorder characterized by distinctive facial appearance, intellectual disability, epilepsy, and various clinically heterogeneous abnormalities reminiscent of neurocristopathies. MWS is caused by haploinsufficiency of <i>ZEB2</i> due to heterozygous point mutations and copy number variations.</p><p><strong>Case presentation: </strong>We report on two unrelated affected individuals with novel <i>ZEB2</i>indel mutations, molecularly confirming the diagnosis of MWS. Quantitative real-time polymerase chain reaction (PCR) for the comparison of total transcript levels and allele-specific quantitative real-time PCR were also performed and demonstrated that the truncating mutations did not lead to nonsense-mediated decay as expected.</p><p><strong>Conclusion: </strong><i>ZEB2</i> encodes a multifunctional pleiotropic protein. Novel mutations in <i>ZEB2</i> should be reported in order that genotype-phenotype correlations might be established in this clinically heterogeneous syndrome. Further cDNA and protein studies may help elucidate the underlying pathogenetic mechanisms of MWS since nonsense-mediated RNA decay was found to be absent in only a few studies including this study.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"258-265"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267494/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9652839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of a Novel IQCE Large Deletion through Copy Number Variant Analysis from Whole-Exome Sequencing Data of a Patient with Postaxial Polydactyly Type A7. 通过对A7型轴后多指畸形患者全外显子组测序数据的拷贝数变异分析,鉴定出一个新的IQCE大缺失。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-01-13 DOI: 10.1159/000527777
Faidon-Nikolaos Tilemis, Nikolaos M Marinakis, Konstantina Kosma, Florentia Fostira, Joanne Traeger-Synodinos
{"title":"Identification of a Novel <i>IQCE</i> Large Deletion through Copy Number Variant Analysis from Whole-Exome Sequencing Data of a Patient with Postaxial Polydactyly Type A7.","authors":"Faidon-Nikolaos Tilemis, Nikolaos M Marinakis, Konstantina Kosma, Florentia Fostira, Joanne Traeger-Synodinos","doi":"10.1159/000527777","DOIUrl":"10.1159/000527777","url":null,"abstract":"<p><strong>Introduction: </strong>Non-syndromic polydactyly has been associated with pathogenic variants in 11 genes until today, including <i>IQCE</i> gene. More precisely, loss-of-function of <i>IQCE</i> is associated with the autosomal recessive disorder postaxial polydactyly type A7 (PAPA7, MIM #617642).</p><p><strong>Case presentation: </strong>A 3-year-old female patient was referred to our genetics department with postaxial polydactyly, syndactyly, brachydactyly, and hypoplastic teeth. Through whole-exome sequencing (WES), a pathogenic <i>IQCE</i> variant was identified (c.895_904del) in the homozygous state, which adequately explained the disease phenotype of our patient. However, copy number variant (CNV) analysis from WES data, using ExomeDepth, revealed a novel, likely pathogenic large deletion involving <i>IQCE</i> genomic regions (DEL:chr7:2606751_2641098) encompassing exons 2-18 of the gene.</p><p><strong>Conclusion: </strong><i>IQCE</i> gene codes for a 695-amino acid protein located at the base of the primary cilia that positively regulates the Hedgehog signaling pathway. This case report represents the first description of a large deletion in <i>IQCE</i> and indicates that implementation of ExomeDepth in routine WES analysis can contribute valuable information toward elucidating the correct etiology of rare genetic diseases, increasing the diagnostic yield, and minimizing the need for additional tests.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"225-230"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267488/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9655797","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Dicentric Recombinant Chromosome 18 due to Maternal Paracentric Inversion Analyzed by Array CGH. 阵列CGH分析母体双中心18号染色体旁中心反转。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-02-01 DOI: 10.1159/000527160
Özlem Anlaş, Akgün Ölmez, Birsen Karaman, Füsun Düzcan, Selçuk Yüksel, Funda Tümkaya, Gülseren Bağcı, Cavidan Nur Semerci Gündüz
{"title":"Dicentric Recombinant Chromosome 18 due to Maternal Paracentric Inversion Analyzed by Array CGH.","authors":"Özlem Anlaş, Akgün Ölmez, Birsen Karaman, Füsun Düzcan, Selçuk Yüksel, Funda Tümkaya, Gülseren Bağcı, Cavidan Nur Semerci Gündüz","doi":"10.1159/000527160","DOIUrl":"10.1159/000527160","url":null,"abstract":"<p><strong>Introduction: </strong>Chromosomal abnormalities are mostly found in 0.5-0.8% of live-born infants with developmental and morphological defects. Paracentric inversions are structural intrachromosomal rearrangements resulting in a risk of chromosomally unbalanced gametes in carriers.</p><p><strong>Case presentation: </strong>Herein, we report a patient with dicentric rearrangement of chromosome 18 due to maternal paracentric inversion of chromosome 18. The patient was a girl, aged 3 years and 11 months. She was referred due to multiple congenital abnormalities, severe intellectual disability, and motor retardation. She had microcephaly, prominent metopic suture, synophrys, epicanthic folds, telecanthus, wide-set alae nasi, wide columella, bilateral cleft lip and palate, pectus carinatum, umbilical hernia, pes planus, and anteriorly displaced anus. She had bilateral external auditory canal stenosis and mild right-sided and moderate left-sided sensorineural hearing loss. Echocardiography showed secundum-type atrial septal defect and mild tricuspid failure. Brain magnetic resonance imaging showed only thinning of posterior areas of the corpus callosum. Chromosome analysis showed 46,XX,dic rec(18) by GTG and C banding. Dicentric chromosome was confirmed by fluorescence in situ hybridization analysis. Paternal karyotype was normal 46,XY but maternal chromosome analysis showed a paracentric inversion in chromosome 18 with 46,XX,inv(18)(q11.2?q21.3?) karyotype. Array CGH was performed on a peripheral blood sample from the patient and showed duplication at 18p11.32p11.21 and 18q11.1q11.2, and deletion at 18q21.33q23. The patient's final karyotype is arr 18p11.32p11.21(64,847_15,102,598)×3,18q11.1q11.2(18,542,074_22,666,470)×3,18q21.33q23(59,784,364_78,010,032)×1.</p><p><strong>Discussion: </strong>To the best of our knowledge, this is the first report of a patient with dicentric chromosome 18 due to a parental paracentric inversion of chromosome 18. We present the genotype-phenotype correlation with literature review.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"246-253"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267564/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9658974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of a Novel Nonsense Variant in the DLL3 Gene Underlying Spondylocostal Dysostosis in a Consanguineous Pakistani Family. 在巴基斯坦一个近亲家庭中,一个新的无意义的DLL3基因变异导致脊椎脊柱畸形的鉴定。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-02-01 DOI: 10.1159/000527043
Feroz Khan, Abida Arshad, Asmat Ullah, Ellen Steenackers, Geert Mortier, Wasim Ahmad, Muhammad Arshad, Sarmir Khan, Amir Hayat, Ikram Khan, Muhammad Asim Khan, Wim Van Hul
{"title":"Identification of a Novel Nonsense Variant in the <i>DLL3</i> Gene Underlying Spondylocostal Dysostosis in a Consanguineous Pakistani Family.","authors":"Feroz Khan, Abida Arshad, Asmat Ullah, Ellen Steenackers, Geert Mortier, Wasim Ahmad, Muhammad Arshad, Sarmir Khan, Amir Hayat, Ikram Khan, Muhammad Asim Khan, Wim Van Hul","doi":"10.1159/000527043","DOIUrl":"10.1159/000527043","url":null,"abstract":"<p><strong>Introduction: </strong>Spondylocostal dysostosis (SCD) is characterized by multiple vertebral abnormalities associated with abnormalities of the ribs. Five genes causative for the disease have been identified. These include <i>DLL3</i> (OMIM *602768), <i>MESP2</i> (OMIM #608681), <i>LFNG</i> (OMIM #609813), <i>TBX6</i> (OMIM *602427), and <i>HES7</i> (OMIM *608059).</p><p><strong>Methods: </strong>In the current study, we investigated a Pakistani consanguineous family segregating spondylocostal dysotosis. Whole-exome sequencing (WES) followed by Sanger sequencing was performed using DNA of affected and unaffected individuals to identify pathogenic variant(s). The identified variant was interpreted using ACMG classification. Literature review was performed to summarize currently known mutated alleles of <i>DLL3</i> and the underlying clinical phenotypes.</p><p><strong>Results: </strong>Clinical examination using anthropometric measurements and radiographs diagnosed the patients to be afflicted with SCD. Pedigree analysis of the affected family showed an autosomal recessive inheritance pattern of the disease. WES followed by Sanger sequencing identified a novel homozygous nonsense variant (<i>DLL3</i>(NM_016941.4): c.535G>T; p.Glu179Ter) in the <i>DLL3</i> gene located on chromosome 19q13.2.</p><p><strong>Conclusion: </strong>The study will be helpful in carrier testing and genetic counseling to prevent segregation of the disease to the next generations within this family. It also provides knowledge for clinicians and researchers in search of a better understanding of SCD anomalies.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"191-200"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267518/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9658977","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Report on a Case with Moreno-Nishimura-Schmidt Overgrowth Syndrome: A Clinically Delineated Disease Yet of an Unknown Origin! Moreno-Nishimura-Schmidt过度生长综合征1例报告:一种临床描述的疾病,但起源不明!
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-01-17 DOI: 10.1159/000527215
Cybel Mehawej, Eliane Chouery, Ghada Al Hage Chehade, Yosra Bejaoui, Daniel Mahfoud, Maya Gerges, Valérie Delague, Nady El Hajj, Andre Megarbane
{"title":"Report on a Case with Moreno-Nishimura-Schmidt Overgrowth Syndrome: A Clinically Delineated Disease Yet of an Unknown Origin!","authors":"Cybel Mehawej, Eliane Chouery, Ghada Al Hage Chehade, Yosra Bejaoui, Daniel Mahfoud, Maya Gerges, Valérie Delague, Nady El Hajj, Andre Megarbane","doi":"10.1159/000527215","DOIUrl":"10.1159/000527215","url":null,"abstract":"<p><strong>Introduction: </strong>Overgrowth syndromes are a heterogeneous group of genetic disorders characterized by excessive growth, often accompanied by additional clinical features, such as facial dysmorphism, hormonal imbalances, cognitive impairment, and increased risk for neoplasia. Moreno-Nishimura-Schmidt (M-N-S) overgrowth syndrome is a very rare overgrowth syndrome characterized by severe pre- and postnatal overgrowth, dysmorphic facial features, kyphoscoliosis, large hands and feet, inguinal hernia, and distinctive skeletal features. The clinical and radiological features of the disorder have been well delineated, yet its molecular pathogenesis remains unclear.</p><p><strong>Case presentation: </strong>We report on a Lebanese boy with M-N-S syndrome, whose clinical manifestations were compared with those of previously reported 5 affected individuals. Whole-exome sequencing combined with comparative genome hybridization analysis failed to delineate the molecular basis of the phenotype. However, epigenetic studies revealed a different methylation status of several CpG sites between him and healthy controls, with methyltransferase activity showing the most significant enrichment.</p><p><strong>Conclusion: </strong>An additional case of M-N-S syndrome recapitulated the clinical and radiological manifestations described in the previous reports. The data in the epigenetic studies implicated that abnormal methylations might play an essential role in development of the disease phenotype. However, additional studies in a clinically homogeneous cohort of patients are crucial to confirm this hypothesis.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"219-224"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267562/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9708995","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
The New Youngest Case of Grange Syndrome with a Novel Biallelic Pathogenic Variant in YY1AP1. 新发现的最年轻的Grange综合征伴YY1AP1新双等位致病变异的病例。
IF 1.1 4区 医学
Molecular Syndromology Pub Date : 2023-06-01 Epub Date: 2023-01-26 DOI: 10.1159/000527785
Taner Karakaya, Ayberk Turkyilmaz, Deniz Eris, Mehtap Kaya, Kupra Oksuz, Meltem Aygul Eryigit, Gizem Gönen
{"title":"The New Youngest Case of Grange Syndrome with a Novel Biallelic Pathogenic Variant in <i>YY1AP1</i>.","authors":"Taner Karakaya, Ayberk Turkyilmaz, Deniz Eris, Mehtap Kaya, Kupra Oksuz, Meltem Aygul Eryigit, Gizem Gönen","doi":"10.1159/000527785","DOIUrl":"10.1159/000527785","url":null,"abstract":"<p><strong>Introduction: </strong>Grange syndrome (OMIM 602531) is characterized by a constellation of symptoms of hypertension, stenosis, or occlusion of different arteries (including the cerebral, renal, abdominal, and coronary vessels) with a variable occurrence of brachysyndactyly, bone fragility, and congenital heart defects. Learning disabilities were also reported in some cases. Biallelic pathogenic variants in <i>YY1AP1</i> are associated with the syndrome. Only 14 individuals with this ultra-rare syndrome (12 of them were molecularly confirmed) have hitherto been reported in the literature.</p><p><strong>Case presentation: </strong>We herein describe a 1<sup>1/2</sup>-year-old additional female case of Grange syndrome with hypertension, patent ductus arteriosus, and brachysyndactyly who was subsequently confirmed to carry a novel homozygous frameshift variant (c.2291del; p.Pro764Leufs*12) in the <i>YY1AP1</i> gene through whole-exome sequencing.</p><p><strong>Conclusion: </strong>This report extends the allelic spectrum in Grange syndrome and helps provide insight into the potential role of YY1AP1 in the regulation of cellular processes.</p>","PeriodicalId":48566,"journal":{"name":"Molecular Syndromology","volume":"14 3","pages":"239-245"},"PeriodicalIF":1.1,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10267489/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9658978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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