{"title":"New Facets of Magnetic Resonance Applications","authors":"V. I. Chizhik, M. S. Tagirov","doi":"10.1007/s00723-023-01614-y","DOIUrl":"10.1007/s00723-023-01614-y","url":null,"abstract":"","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"891 - 894"},"PeriodicalIF":1.0,"publicationDate":"2023-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720299","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yulia A. Pronina, Alexander V. Stepakov, Ekaterina A. Popova, Vitali M. Boitsov, Ruslan I. Baichurin, Stanislav I. Selivanov
{"title":"Diastereomers of Cyclopropa[a]pyrrolizine Spiro-fused with a Benzo[4,5]imidazo[1,2-a]indole Fragment: Structure Determinations Using NMR Methods","authors":"Yulia A. Pronina, Alexander V. Stepakov, Ekaterina A. Popova, Vitali M. Boitsov, Ruslan I. Baichurin, Stanislav I. Selivanov","doi":"10.1007/s00723-023-01608-w","DOIUrl":"10.1007/s00723-023-01608-w","url":null,"abstract":"<div><p>NMR spectroscopy methods have been used to prove structures of two diastereomers of cyclopropa[<i>a</i>]pyrrolizine spiro-fused with a benzo[4,5]imidazo[1,2-<i>a</i>]indole fragment which were obtained through a three-component 1,3-dipolar cycloaddition reaction and isolated in a ratio of 6:1. Complete signal assignment in <sup>1</sup>H and <sup>13</sup>C spectra of each compound was made by using some homonuclear (COSY, NOESY) and heteronuclear (HMQC, HMBC) NMR experiments. The spatial structure of the studied diastereomers was proved on the basis of data on interproton through-space interactions obtained from the NOESY spectra at a mixing time of 0.5 s. The comparison of the experimental and calculated values of the vicinal constants and interproton distances indicates that each of the studied diastereomers in solution is characterized by a fast (in the NMR time scale) conformational equilibrium due to the inversion of the nitrogen atom in the cyclopropa[<i>a</i>]pyrrolizine fragment.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"999 - 1014"},"PeriodicalIF":1.0,"publicationDate":"2023-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720263","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Leonid Grunin, Maria Ivanova, Veronika Schiraya, Tatiana Grunina
{"title":"Time-Domain NMR Techniques in Cellulose Structure Analysis","authors":"Leonid Grunin, Maria Ivanova, Veronika Schiraya, Tatiana Grunina","doi":"10.1007/s00723-023-01600-4","DOIUrl":"10.1007/s00723-023-01600-4","url":null,"abstract":"<div><p>The role of cellulose in various applications is remarkably going up in recent decades as it is a renewable material for wide areas of applications that can be delivered in huge quantities. This drives permanently growing interest to development of sensors for processing industry, that can give fast and reliable information about physicochemical structure of cellulosic materials. In this framework, Time-Domain NMR with its capability to be miniaturized may become very attractive to measure such structural parameters as crystallinity, domain sizes, and sorption properties. This contribution is aimed to summarize existing NMR relaxometric methods and update them with the techniques of signal processing and pulse sequences like Magic Sandwich Echo or multiple quantum transitions, that are well established for synthetic polymers, but still have not been extensively used for polysaccharides. Here, we also demonstrate our own results of cellulose study trying to contribute to the promotion of Time-Domain NMR applicability to biopolymers.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"929 - 955"},"PeriodicalIF":1.0,"publicationDate":"2023-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00723-023-01600-4.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720269","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M. Tokaç, S. Kazan, B. Özkal, N. Al-jawfi, B. Rameev, B. Nicholson, A. T. Hindmarch
{"title":"Two Magnon Scattering Contribution to the Ferromagnetic Resonance Linewidth of Pt(Ir)/CoFeTaB/Ir(Pt) Thin Films","authors":"M. Tokaç, S. Kazan, B. Özkal, N. Al-jawfi, B. Rameev, B. Nicholson, A. T. Hindmarch","doi":"10.1007/s00723-023-01601-3","DOIUrl":"10.1007/s00723-023-01601-3","url":null,"abstract":"<div><p>The magnetic properties of Pt/CoFeTaB/Ir and Ir/CoFeTaB/Pt trilayer thin films have been studied using angular- and temperature-dependent ferromagnetic resonance. This enables quantitative determination of the various contributions to the magnetic behavior, including separating, the effective Gilbert damping, inhomogeneous damping, and two-magnon-scattering contributions to the magnetic dissipation. As-deposited films show behavior consistent with significant incorporation of Ir into CoFeTaB only when the Ir layer is deposited first. Annealing of the structures at <span>(300,^{circ } hbox {C})</span> causes only minor structural and magnetic modification when Pt is deposited first, and more pronounced changes, attributed to thermally-driven out-diffusion of Ir from CoFeTaB, are found when Ir is deposited first. A holistic consideration of the magnetic resonance behavior can provide detailed information on the atomic-scale structure in magnetic thin-film devices.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"1053 - 1064"},"PeriodicalIF":1.0,"publicationDate":"2023-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00723-023-01601-3.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720268","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Denis V. Lezov, Tatiana. A. Kochina, Ruslan I. Baichurin, Stanislav I. Selivanov
{"title":"Homo- and Heteronuclear NMR Methods for Signal Assignments in 1H and 13C Spectra of 1-Aminoacyloxygermatran","authors":"Denis V. Lezov, Tatiana. A. Kochina, Ruslan I. Baichurin, Stanislav I. Selivanov","doi":"10.1007/s00723-023-01593-0","DOIUrl":"10.1007/s00723-023-01593-0","url":null,"abstract":"<div><p>1-Aminoacyloxygermatran containing a hexacoordinated germanium atom and an amino acid substituent in its structure—L-valine—was synthesized and studied by high resolution <sup>1</sup>H and <sup>13</sup>C NMR spectroscopy for the first time. Complete signal assignment in two different parts of <sup>1</sup>H spectra containing 8 and 12 overlapped multiplets from –O-CH<sub>2</sub>- and –N-CH<sub>2</sub>- protons was made by using homonuclear <i>J</i>-COSY, COSY and NOESY methods and on base data of heteronuclear HMQC and HMBC experiments. The spatial structure of the studied 1-aminoacyloxygermatran was proved on the basis of data on interproton through-space interactions obtained from the NOESY spectra at different mixing times from 0.3 to 1.2 s. Simultaneously, along with cross peaks from positive NOEs, exchange cross peaks between germinal protons of different -O-CH<sub>2</sub>- groups were found in the same spectra, thus indicating the existence of a slow (in the NMR time scale) dynamic process in this compound associated with rearrangements within the atranium cycle.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"987 - 998"},"PeriodicalIF":1.0,"publicationDate":"2023-08-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720262","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Viktor N. Demidov, Stanislav M. Sukharzhevsky, Tatiana B. Pakhomova, Alexandra G. Ivanova, Sofia V. Paston, Evgenia V. Bogomolova
{"title":"Investigation by ESR Spectroscopy of Biology Active Electron-Rich 1,10-Phenanthrocyanines of d-Elements (Soft Colloidal Glasses)","authors":"Viktor N. Demidov, Stanislav M. Sukharzhevsky, Tatiana B. Pakhomova, Alexandra G. Ivanova, Sofia V. Paston, Evgenia V. Bogomolova","doi":"10.1007/s00723-023-01586-z","DOIUrl":"10.1007/s00723-023-01586-z","url":null,"abstract":"<div><p>The 1,10-phenanthrocyanines of d-elements were investigated by ESR spectroscopy both in the solid (glassy) state and in solutions. These are coordination compounds of a new structural class of apocyanines: chromophore binuclear cation complexes [M<sup>2+</sup>L<sub>n</sub>(µ-PC)]<sub>2</sub>X<sub>m</sub> (M<sup>2+</sup> = Zn<sup>2+</sup>, Cd<sup>2+</sup>, Co<sup>2+</sup>, Pd<sup>2+</sup>and Pt<sup>2+</sup>; L = 1,10-phenanthroline, 2,9-Me<sub>2</sub>-1,10-phenanthroline, pyridine; X = AcO<sup>−</sup>, Cl<sup>−</sup>) with electron-rich bridged 1,10-phenanthrocyanine ligands µ-PC. They are presented as soft colloidal glasses capable of acting as inhibitors of tumor cell proliferation, fungicides and DNA complexones. The study of them by ESR spectroscopy showed that one of the possible mechanisms for the formation of spin centers is thermally directed singlet–triplet S<sub>0</sub> → <i>T</i><sub>low.</sub>-transitions.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"1015 - 1051"},"PeriodicalIF":1.0,"publicationDate":"2023-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00723-023-01586-z.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720285","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marina G. Shelyapina, Denis Yu. Nefedov, Anastasiia O. Antonenko, H’Linh Hmok, Andrei V. Egorov, Maria I. Egorova, Alexandr V. Ievlev, Rosario Yocupicio-Gaxiola, Vitalii Petranovskii, Joel Antúnez-García, Sergio Fuentes
{"title":"Dynamics of Guest Water Molecules in Pillared Mordenite Studied by 1H NMR Relaxation","authors":"Marina G. Shelyapina, Denis Yu. Nefedov, Anastasiia O. Antonenko, H’Linh Hmok, Andrei V. Egorov, Maria I. Egorova, Alexandr V. Ievlev, Rosario Yocupicio-Gaxiola, Vitalii Petranovskii, Joel Antúnez-García, Sergio Fuentes","doi":"10.1007/s00723-023-01589-w","DOIUrl":"10.1007/s00723-023-01589-w","url":null,"abstract":"<div><p>The dynamics of H<sub>2</sub>O molecules confined in mesopores of about 3.4 nm in size, formed by amorphous SiO<sub>2</sub> pillars separating 2D mordenite nanolayers, was probed by <sup>1</sup>H nuclear magnetic relaxation. <sup>1</sup>H nuclear magnetic resonance (NMR) spectra evidence the presence of water with different local surroundings and mobility. The temperature dependence of <sup>1</sup>H spin–lattice relaxation <i>T</i><sub>1</sub> and relaxation in rotating frame <i>T</i><sub>1ρ</sub> indicate the complex behavior of nanoconfined water that can be characterized by different activation energies: freezing (29 kJ/mol), fast rotation (12 kJ/mol), and translational motion (23.6 kJ/mol).</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"915 - 928"},"PeriodicalIF":1.0,"publicationDate":"2023-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00723-023-01589-w.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720284","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"1H, 13C, and 15N Resonance Assignments of the DNA Binding Domain of Ler from Enteropathogenic E. coli in Complex with DNA","authors":"Fan Liu, Bo Duan, Bin Xia","doi":"10.1007/s00723-023-01575-2","DOIUrl":"10.1007/s00723-023-01575-2","url":null,"abstract":"<div><p>Ler is a master regulator for the gene regulation of the locus of enterocyte effacement (LEE) pathogenicity island (PAI), which could activate the transcription of <i>LEE2</i> to <i>LEE5</i> by counteracting the repression of H-NS. Ler contains an N-terminal oligomerization domain, a linker region, and a C-terminal DNA binding domain. However, the DNA binding mechanism of Ler remains unclear. Here, we report the <sup>1</sup>H, <sup>13</sup>C, and <sup>15</sup>N NMR assignments of Ler<sup>CTD</sup>/3A3T-DNA complex. We have achieved 97.8% completeness for the backbone and side-chain resonance assignments of Ler<sup>CTD</sup> in the complex, excluding <sup>13</sup>C′ resonances. In addition, about 91.5% of the <sup>1</sup>H resonances of 3A3T-DNA have been assigned. Our near complete assignments of this complex will significantly advance the parsing of the intermolecular NOE signals between Ler <sup>CTD</sup> and 3A3T-DNA. Therefore, our NMR assignments formed a good basis for further DNA binding mechanism studies of Ler.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"979 - 985"},"PeriodicalIF":1.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00723-023-01575-2.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ilya V. Yakovlev, Aleksandr V. Toktarev, Aleksandr A. Shubin, Evgeniy S. Papulovskiy, Natalia E. Cherepanova, Olga B. Lapina
{"title":"Incorporation of Boron into the AlPO-11 Framework According to 11B and 27Al Solid-State NMR Spectroscopy and First-Principles Calculations","authors":"Ilya V. Yakovlev, Aleksandr V. Toktarev, Aleksandr A. Shubin, Evgeniy S. Papulovskiy, Natalia E. Cherepanova, Olga B. Lapina","doi":"10.1007/s00723-023-01581-4","DOIUrl":"10.1007/s00723-023-01581-4","url":null,"abstract":"<div><p>Various aluminophosphates (AlPO-n) are a class of zeolite-like porous compounds built from alternating AlO<sub>4</sub> and PO<sub>4</sub> tetrahedra that demonstrate promising results as catalysts and catalyst supports. Their acid–base properties can be varied by substitution of different Al and P sites with different heteroatoms among which boron is of great interest. However, the ability to incorporate boron into the AlPO frameworks seems to be hindered since only very limited data are available on successful synthesis of BAPO (boron-substituted AlPO) materials. Here, we report the application of solid-state <sup>27</sup>Al, <sup>11</sup>B NMR techniques together with quantum chemical calculations for characterization of BAPO-11 obtained by hydrothermal synthesis. The coordination geometry of the B atoms in the framework is exclusively tetrahedral. However, the fraction of B atoms incorporated in the framework was very low and did not correspond to the B content in the initial composition. Extra-framework trigonal boron was also shown to be present in the sample. DFT calculations allowed us to suggest that boron replaced a small part of the Al1 site of the dehydrated AlPO-11 framework.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"957 - 969"},"PeriodicalIF":1.0,"publicationDate":"2023-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720283","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nikolay V. Anisimov, Lev L. Gervits, Arina A. Tarasova, Ivan A. Usanov, Yury A. Pirogov
{"title":"MRI of Inanimate Objects Using Fluorine-Containing Liquid","authors":"Nikolay V. Anisimov, Lev L. Gervits, Arina A. Tarasova, Ivan A. Usanov, Yury A. Pirogov","doi":"10.1007/s00723-023-01580-5","DOIUrl":"10.1007/s00723-023-01580-5","url":null,"abstract":"<div><p>The paper shows the possibilities of using a fluorine-containing liquid—the so-called dry water for the MRI of inanimate objects using the signal void imaging method. Examples of visualization of objects that cannot be immersed in ordinary water and other liquid media that can dissolve or spoil the object under study are presented. The possibilities of visualization of a radio engineering product immersed in dry water during its operation are shown. Namely, the coil, which itself is involved in the scanning process, is used to receive and/or transmit RF power. It is shown that the images of the medium surrounding the coil obtained in this case make it possible to construct sensitivity maps and <i>B</i><sub>1</sub> maps of this coil. The issues of optimization of scanning parameters based on information about the <sup>19</sup>F NMR spectrum and measurements of relaxation times for a given liquid are discussed.</p></div>","PeriodicalId":469,"journal":{"name":"Applied Magnetic Resonance","volume":"54 10","pages":"895 - 904"},"PeriodicalIF":1.0,"publicationDate":"2023-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00723-023-01580-5.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6720298","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}