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KAMIStudio: An Environment for Biocuration of Cellular Signalling Knowledge KAMIStudio:细胞信号知识的生物固化环境
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_20
Russell Harmer, Eugenia Oshurko
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引用次数: 3
Extending a Hodgkin-Huxley Model for Larval Drosophila Muscle Excitability via Particle Swarm Fitting 用粒子群拟合扩展果蝇肌肉兴奋性的Hodgkin-Huxley模型
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_7
Paul Piho, Filip Margetiny, E. Bartocci, R. Ribchester, J. Hillston
{"title":"Extending a Hodgkin-Huxley Model for Larval Drosophila Muscle Excitability via Particle Swarm Fitting","authors":"Paul Piho, Filip Margetiny, E. Bartocci, R. Ribchester, J. Hillston","doi":"10.1007/978-3-030-31304-3_7","DOIUrl":"https://doi.org/10.1007/978-3-030-31304-3_7","url":null,"abstract":"","PeriodicalId":433620,"journal":{"name":"Computational Methods in Systems Biology","volume":"2018 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129772904","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bayesian Parameter Estimation for Stochastic Reaction Networks from Steady-State Observations 基于稳态观测的随机反应网络贝叶斯参数估计
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_23
Ankit Gupta, M. Khammash, G. Sanguinetti
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引用次数: 2
Separators for Polynomial Dynamic Systems with Linear Complexity 线性复杂度多项式动态系统的分离算子
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_30
I. Abdeljaoued-Tej, Alia Benkahla, Ghassen Haddad, A. Valibouze
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引用次数: 0
Fast Enumeration of Non-isomorphic Chemical Reaction Networks 非同构化学反应网络的快速枚举
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_12
Carlo Spaccasassi, B. Yordanov, Andrew Phillips, Neil Dalchau
{"title":"Fast Enumeration of Non-isomorphic Chemical Reaction Networks","authors":"Carlo Spaccasassi, B. Yordanov, Andrew Phillips, Neil Dalchau","doi":"10.1007/978-3-030-31304-3_12","DOIUrl":"https://doi.org/10.1007/978-3-030-31304-3_12","url":null,"abstract":"","PeriodicalId":433620,"journal":{"name":"Computational Methods in Systems Biology","volume":"65 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117016866","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Reachability Design Through Approximate Bayesian Computation 基于近似贝叶斯计算的可达性设计
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_11
Mahmoud Bentriou, Paolo Ballarini, P. Cournède
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引用次数: 2
Computing Difference Abstractions of Metabolic Networks Under Kinetic Constraints 动力学约束下代谢网络差分抽象的计算
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_14
Emilie Allart, Joachim Niehren, Cristian Versari
{"title":"Computing Difference Abstractions of Metabolic Networks Under Kinetic Constraints","authors":"Emilie Allart, Joachim Niehren, Cristian Versari","doi":"10.1007/978-3-030-31304-3_14","DOIUrl":"https://doi.org/10.1007/978-3-030-31304-3_14","url":null,"abstract":"","PeriodicalId":433620,"journal":{"name":"Computational Methods in Systems Biology","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130114633","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
A New Version of DAISY to Test Structural Identifiability of Biological Models 一个新版本的DAISY测试生物模型的结构可识别性
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_21
M. Saccomani, Giuseppina Bellu, S. Audoly, L. D'Angiò
{"title":"A New Version of DAISY to Test Structural Identifiability of Biological Models","authors":"M. Saccomani, Giuseppina Bellu, S. Audoly, L. D'Angiò","doi":"10.1007/978-3-030-31304-3_21","DOIUrl":"https://doi.org/10.1007/978-3-030-31304-3_21","url":null,"abstract":"","PeriodicalId":433620,"journal":{"name":"Computational Methods in Systems Biology","volume":"49 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115611842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Sequential Reprogramming of Boolean Networks Made Practical 布尔网络的顺序重编程实现
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_1
Hugues Mandon, Cui Su, S. Haar, Jun Pang, Loïc Paulevé
{"title":"Sequential Reprogramming of Boolean Networks Made Practical","authors":"Hugues Mandon, Cui Su, S. Haar, Jun Pang, Loïc Paulevé","doi":"10.1007/978-3-030-31304-3_1","DOIUrl":"https://doi.org/10.1007/978-3-030-31304-3_1","url":null,"abstract":"","PeriodicalId":433620,"journal":{"name":"Computational Methods in Systems Biology","volume":"57 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124879925","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
Barbaric Robustness Monitoring Revisited for STL* in Parasim 再论Parasim中STL*的野蛮鲁棒性监测
Computational Methods in Systems Biology Pub Date : 2019-09-18 DOI: 10.1007/978-3-030-31304-3_26
David Šafránek, Matej Troják, Vojtech Bruza, Tomás Vejpustek, Jan Papousek, M. Demko, Samuel Pastva, A. Pejznoch, L. Brim
{"title":"Barbaric Robustness Monitoring Revisited for STL* in Parasim","authors":"David Šafránek, Matej Troják, Vojtech Bruza, Tomás Vejpustek, Jan Papousek, M. Demko, Samuel Pastva, A. Pejznoch, L. Brim","doi":"10.1007/978-3-030-31304-3_26","DOIUrl":"https://doi.org/10.1007/978-3-030-31304-3_26","url":null,"abstract":"","PeriodicalId":433620,"journal":{"name":"Computational Methods in Systems Biology","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"127425629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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