Human Microbiome Journal最新文献

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Bacteroides bouchesdurhonensis sp. nov., a new bacterium isolated from the human gut 鲍氏杜洪氏拟杆菌,一种从人肠道分离的新细菌
Human Microbiome Journal Pub Date : 2017-03-01 DOI: 10.1016/j.humic.2017.01.003
Sokhna Ndongo , Jean-Christophe Lagier , Hubert Bassene , Pierre-Edouard Fournier
{"title":"Bacteroides bouchesdurhonensis sp. nov., a new bacterium isolated from the human gut","authors":"Sokhna Ndongo ,&nbsp;Jean-Christophe Lagier ,&nbsp;Hubert Bassene ,&nbsp;Pierre-Edouard Fournier","doi":"10.1016/j.humic.2017.01.003","DOIUrl":"10.1016/j.humic.2017.01.003","url":null,"abstract":"<div><p>We report here the main characteristics of a new species named <em>Bacteroides bouchesdurhonensis</em> sp. nov., strain Marseille-P2653<sup>T</sup> (=CSUR P2653) that was isolated from a stool sample of a healthy 28-year-old Senegalese man.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2017-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2017.01.003","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45103839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bacteroides congonensis sp. nov., a new bacterial species from the human gut microbiota 孔氏拟杆菌,一种来自人类肠道微生物群的新细菌
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.11.004
Melhem Bilen , Frederic Cadoret , Ziad Daoud , Pierre-Edouard Fournier
{"title":"Bacteroides congonensis sp. nov., a new bacterial species from the human gut microbiota","authors":"Melhem Bilen ,&nbsp;Frederic Cadoret ,&nbsp;Ziad Daoud ,&nbsp;Pierre-Edouard Fournier","doi":"10.1016/j.humic.2016.11.004","DOIUrl":"10.1016/j.humic.2016.11.004","url":null,"abstract":"<div><p>We herein describe the main characteristics of <em>Bacteroides congonensis</em> sp. nov. strain Marseille-P3132<sup>T</sup> (CSUR P3132) that was cultivated from a stool specimen of a healthy 35-year-old female pygmy from Congo.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.11.004","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458833","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of HIV on the human gut microbiota: Challenges and perspectives HIV对人类肠道菌群的影响:挑战和观点
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.10.001
Grégory Dubourg
{"title":"Impact of HIV on the human gut microbiota: Challenges and perspectives","authors":"Grégory Dubourg","doi":"10.1016/j.humic.2016.10.001","DOIUrl":"10.1016/j.humic.2016.10.001","url":null,"abstract":"<div><p>Interplay between the gut microbiota and the immune system during HIV infection is currently a subject of intense research. Several remarkable works were recently published and clearly associated structural changes in its composition with disease progression markers. As well, specific commensal species were reported to contribute to immune activation during the infection. However, the use of extremely varied material and methods has led to inconsistent findings, sometimes discrepant. Herein, we propose to review the main studies dedicated to the impact of HIV on the gut microbiota composition such as those deciphering interplay between gut bacterial species and the immune system during the infection. We finally provide exciting perspectives in modulating the HIV gut microbiome to lessen disease progression as a novel adjuvant treatment.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.10.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Gut microbiota and Clostridium difficile infections 肠道菌群与艰难梭菌感染
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.10.003
Jean-Christophe Lagier
{"title":"Gut microbiota and Clostridium difficile infections","authors":"Jean-Christophe Lagier","doi":"10.1016/j.humic.2016.10.003","DOIUrl":"10.1016/j.humic.2016.10.003","url":null,"abstract":"<div><p><em>Clostridium difficile</em> infections (CDI) are the first cause of healthcare associated diarrhea in both Europe and the USA, causing between 15,000 and 30,000 deaths annually. Over the age of 65, antibiotic treatments are the two main risk factors of developing CDI. Fecal microbiota transplantation has a major role to play in managing these infections. Gut microbiota dysbiosis associated with CDI has been now comprehensively analyzed.</p><p>Elderly individuals, patients treated with antibiotics or proton pump inhibitors have a dramatically decreased level of gut microbiota diversity as well as undergoing structural changes in taxa composition. In addition to this decreased diversity, patients with CDI present an increase in species belonging to <em>Proteobacteria</em> and a decrease in <em>Clostridiales Incertae Sedis</em> XI, and some commensal bacteria as <em>Ruminococcaceae</em>, <em>Lachnospiraceae</em> or <em>Bifidobacterium longum</em> for patients with CDI, caused by the 027 ribotype. Fecal microbiota transplantation is followed by a reestablishment of diversity, an increase in <em>Firmicutes</em> and <em>Bacteroidetes</em> and a decrease in <em>Proteobacteria, Enterobacteriaceae and Streptoccaceae</em>.</p><p>Most of the studies are performed using metagenomics and sometimes yield contradictory results. Large studies, including culture dependent techniques and metagenomics using optimized extraction protocols to limit biases should be designed in order to comprehensively highlight the gut microbiota dysbiosis and consider specific microbiome-based therapeutic approaches.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.10.003","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 21
Parabacteroides timonensis sp. nov., identified in human stool 在人类粪便中发现的蒙古副芽孢杆菌
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.10.002
Melhem Bilen , Frederic Cadoret , Ziad Daoud , Pierre-Edouard Fournier , Didier Raoult
{"title":"Parabacteroides timonensis sp. nov., identified in human stool","authors":"Melhem Bilen ,&nbsp;Frederic Cadoret ,&nbsp;Ziad Daoud ,&nbsp;Pierre-Edouard Fournier ,&nbsp;Didier Raoult","doi":"10.1016/j.humic.2016.10.002","DOIUrl":"10.1016/j.humic.2016.10.002","url":null,"abstract":"<div><p>We report the main characteristics of <em>Parabacteroides timonensis</em> sp. nov. strain Marseille-P3236<sup>T</sup> (CSURP3236) that was isolated from a stool sample of a healthy 39<!--> <!-->year-old pygmy male.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.10.002","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458612","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
“Collinsella vaginalis” sp. nov., a new bacterial species cultivated from human female genital tract “阴道Collinsella vaginalis”sp. nov.,一种从人类女性生殖道培养的新细菌
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.11.001
Khoudia Diop , Florence Bretelle , Pierre-Edouard Fournier , Didier Raoult , Florence Fenollar
{"title":"“Collinsella vaginalis” sp. nov., a new bacterial species cultivated from human female genital tract","authors":"Khoudia Diop ,&nbsp;Florence Bretelle ,&nbsp;Pierre-Edouard Fournier ,&nbsp;Didier Raoult ,&nbsp;Florence Fenollar","doi":"10.1016/j.humic.2016.11.001","DOIUrl":"10.1016/j.humic.2016.11.001","url":null,"abstract":"<div><p>We present a brief description of “<em>Collinsella vaginalis</em>” strain P2666 (=CSUR P2666), a new bacterium that was cultivated from the vaginal sample of a 26-year-old woman affected from bacterial vaginosis.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.11.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
“Murdochiella vaginalis” sp. nov., a new bacterial species cultivated from the vaginal flora of a woman with bacterial vaginosis 从细菌性阴道病患者阴道菌群中培养出的一种新细菌“梅铎氏菌”
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.11.002
Khoudia Diop , Didier Raoult , Florence Bretelle , Florence Fenollar
{"title":"“Murdochiella vaginalis” sp. nov., a new bacterial species cultivated from the vaginal flora of a woman with bacterial vaginosis","authors":"Khoudia Diop ,&nbsp;Didier Raoult ,&nbsp;Florence Bretelle ,&nbsp;Florence Fenollar","doi":"10.1016/j.humic.2016.11.002","DOIUrl":"10.1016/j.humic.2016.11.002","url":null,"abstract":"<div><p>Here, we summarize the majors characteristics of “<em>Murdochiella vaginalis</em>” strain Marseille P2341 (=DSM 102237 =CSUR P2341), a new member of the <em>Murdochiella</em> genus cultivated from the vaginal swab of a 33-year-old woman with bacterial vaginosis.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.11.002","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458764","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
“Olsenella urininfantis”, a new bacterial species isolated from a urine sample of a 26-day-old boy suffering from gastroesophageal reflux 从患有胃食管反流的26天大男孩的尿液样本中分离出的一种新细菌“尿婴Olsenella urininfants”
Human Microbiome Journal Pub Date : 2016-12-01 DOI: 10.1016/j.humic.2016.11.003
Aurélie Morand , Brigitte Chabrol , Pierre-Edouard Fournier
{"title":"“Olsenella urininfantis”, a new bacterial species isolated from a urine sample of a 26-day-old boy suffering from gastroesophageal reflux","authors":"Aurélie Morand ,&nbsp;Brigitte Chabrol ,&nbsp;Pierre-Edouard Fournier","doi":"10.1016/j.humic.2016.11.003","DOIUrl":"10.1016/j.humic.2016.11.003","url":null,"abstract":"<div><p>We report here the main characteristics of “<em>Olsenella urininfantis</em>” strain Marseille-P3197<sup>T</sup> (CSUR P3197). That strain was isolated from a urine sample of a 26-day-old boy suffering from gastroesophageal reflux.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.11.003","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458815","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Republication of «New Species Announcement», a new format to prompt the description of new human microbial species 重新出版«新物种公告»,一个新的格式,以提示新的人类微生物物种的描述
Human Microbiome Journal Pub Date : 2016-09-01 DOI: 10.1016/j.humic.2016.05.001
Pierre-Edouard Fournier, Didier Raoult, Michel Drancourt
{"title":"Republication of «New Species Announcement», a new format to prompt the description of new human microbial species","authors":"Pierre-Edouard Fournier,&nbsp;Didier Raoult,&nbsp;Michel Drancourt","doi":"10.1016/j.humic.2016.05.001","DOIUrl":"10.1016/j.humic.2016.05.001","url":null,"abstract":"","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.05.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
“Bacillus massilionigeriensis”, a new bacterial species isolated from the human gut microbiota 从人类肠道微生物群中分离出的一种新细菌——马氏芽孢杆菌
Human Microbiome Journal Pub Date : 2016-09-01 DOI: 10.1016/j.humic.2016.06.001
Maryam Tidjani Alou , Souleymane Brah , Jeremy Delerce , Frédéric Cadoret , Pierre-Edouard Fournier , Jean-Christophe Lagier
{"title":"“Bacillus massilionigeriensis”, a new bacterial species isolated from the human gut microbiota","authors":"Maryam Tidjani Alou ,&nbsp;Souleymane Brah ,&nbsp;Jeremy Delerce ,&nbsp;Frédéric Cadoret ,&nbsp;Pierre-Edouard Fournier ,&nbsp;Jean-Christophe Lagier","doi":"10.1016/j.humic.2016.06.001","DOIUrl":"10.1016/j.humic.2016.06.001","url":null,"abstract":"<div><p>We present a summary of the main characteristics of “<em>Bacillus massilionigeriensis</em>” strain Marseille-P2384<sup>T</sup> (=CSUR P2384), isolated from the gut microbiota of a 44-month-old healthy girl from Niger.</p></div>","PeriodicalId":37790,"journal":{"name":"Human Microbiome Journal","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2016-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.humic.2016.06.001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54458295","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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