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Workshop on Algorithms in Bioinformatics最新文献

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Accurate Decoding of Pooled Sequenced Data Using Compressed Sensing 基于压缩感知的混合序列数据的精确解码
Workshop on Algorithms in Bioinformatics Pub Date : 2013-07-29 DOI: 10.1007/978-3-642-40453-5_7
D. Duma, Mary Wootters, A. Gilbert, H. Ngo, A. Rudra, M. Alpert, T. Close, G. Ciardo, S. Lonardi
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引用次数: 11
A Fixed-Parameter Algorithm for Minimum Common String Partition with Few Duplications 一种少重复最小公共字符串分割的固定参数算法
Workshop on Algorithms in Bioinformatics Pub Date : 2013-07-29 DOI: 10.1007/978-3-642-40453-5_19
L. Bulteau, G. Fertin, Christian Komusiewicz, I. Rusu
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引用次数: 25
Lightweight LCP Construction for Next-Generation Sequencing Datasets 下一代测序数据集的轻量级LCP构建
Workshop on Algorithms in Bioinformatics Pub Date : 2013-05-01 DOI: 10.1007/978-3-642-33122-0_26
Markus J. Bauer, A. Cox, Giovanna Rosone, M. Sciortino
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引用次数: 32
From de Bruijn Graphs to Rectangle Graphs for Genome Assembly 基因组组装从德布鲁因图到矩形图
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_20
Nikolay Vyahhi, A. Pyshkin, Son K. Pham, P. Pevzner
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引用次数: 13
Succinct de Bruijn Graphs 图
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_18
A. Bowe, Taku Onodera, K. Sadakane, T. Shibuya
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引用次数: 171
A Simplified View of DCJ-Indel Distance DCJ-Indel距离的简化视图
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_29
Phillip E. C. Compeau
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引用次数: 15
MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides MS-DPR:一种计算非线性肽谱鉴别统计显著性的算法
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_24
H. Mohimani, Sangtae Kim, P. Pevzner
{"title":"MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides","authors":"H. Mohimani, Sangtae Kim, P. Pevzner","doi":"10.1007/978-3-642-33122-0_24","DOIUrl":"https://doi.org/10.1007/978-3-642-33122-0_24","url":null,"abstract":"","PeriodicalId":329847,"journal":{"name":"Workshop on Algorithms in Bioinformatics","volume":"74 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124045371","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Resolving Spatial Inconsistencies in Chromosome Conformation Data 解决染色体构象数据的空间不一致性
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_23
Geet Duggal, Robert Patro, Emre Sefer, Hao Wang, Darya Filippova, S. Khuller, Carl Kingsford
{"title":"Resolving Spatial Inconsistencies in Chromosome Conformation Data","authors":"Geet Duggal, Robert Patro, Emre Sefer, Hao Wang, Darya Filippova, S. Khuller, Carl Kingsford","doi":"10.1007/978-3-642-33122-0_23","DOIUrl":"https://doi.org/10.1007/978-3-642-33122-0_23","url":null,"abstract":"","PeriodicalId":329847,"journal":{"name":"Workshop on Algorithms in Bioinformatics","volume":"89 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134528406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
CLIIQ: Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population CLIIQ:准确的比较检测和定量表达异构体在一个群体
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_14
Yen-Yi Lin, Phuong Dao, Faraz Hach, M. Bakhshi, Fan Mo, A. Lapuk, C. Collins, S. C. Sahinalp
{"title":"CLIIQ: Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population","authors":"Yen-Yi Lin, Phuong Dao, Faraz Hach, M. Bakhshi, Fan Mo, A. Lapuk, C. Collins, S. C. Sahinalp","doi":"10.1007/978-3-642-33122-0_14","DOIUrl":"https://doi.org/10.1007/978-3-642-33122-0_14","url":null,"abstract":"","PeriodicalId":329847,"journal":{"name":"Workshop on Algorithms in Bioinformatics","volume":"40 3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133905131","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 42
Reconstructing the Evolution of Molecular Interaction Networks under the DMC and Link Dynamics Models DMC和链接动力学模型下分子相互作用网络的演化重建
Workshop on Algorithms in Bioinformatics Pub Date : 2012-09-10 DOI: 10.1007/978-3-642-33122-0_5
Yun Zhu, L. Nakhleh
{"title":"Reconstructing the Evolution of Molecular Interaction Networks under the DMC and Link Dynamics Models","authors":"Yun Zhu, L. Nakhleh","doi":"10.1007/978-3-642-33122-0_5","DOIUrl":"https://doi.org/10.1007/978-3-642-33122-0_5","url":null,"abstract":"","PeriodicalId":329847,"journal":{"name":"Workshop on Algorithms in Bioinformatics","volume":"2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128353783","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
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