M. Fahmi, Eni Kusrini, Erma P. Hayuningtiyas, S. Sinansari, R. Gustiano
{"title":"DNA BARCODING USING COI GENE SEQUENCES OF WILD BETTA FIGHTING FISH FROM INDONESIA: PHYLOGENY, STATUS AND DIVERSITY","authors":"M. Fahmi, Eni Kusrini, Erma P. Hayuningtiyas, S. Sinansari, R. Gustiano","doi":"10.15578/ifrj.26.2.2020.97-105","DOIUrl":"https://doi.org/10.15578/ifrj.26.2.2020.97-105","url":null,"abstract":"The wild betta fish is a potential ornamental fish export commodity normally caught by traders or hobbyists in the wild. However, the population of wild betta in nature has declined and become a threat for their sustainability. This research was conducted to analyze the genetic diversity, phylogenetic relationships, and molecular identification through DNA COI gene sequence of Indonesian wild betta fish. A total of 92 wild betta fish specimens were collected in this study. Amplification of COI genes was carried out using Fish F1, Fish R1, Fish F2, and Fish R2 primers. The genetic diversity and phylogenetic relationships were analyzed using MEGA version 5 software program. Species identification of the specimen was conducted using BLAST program with 98100% similarity value of the DNA sequences to indicate the same species. Phylogenetic tree construction showed seven monophyletic clades and showed that Betta smaragdina was the ancestral species of genus Betta in Indonesian waters. Genetic distance among species ranged from 0.02 to 0.30, whereas intra-species genetic distance ranged from 0 to 6.54.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"97"},"PeriodicalIF":0.0,"publicationDate":"2020-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41678964","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A. Widodo, Wudianto Wudianto, L. Sadiyah, Mahiswara Mahiswara, C. Proctor, S. Cooper
{"title":"NVESTIGATION ON TUNA FISHERIES ASSOCIATED WITH FISH AGGREGATING DEVICES (FADs) IN INDONESIA FMA 572 AND 573","authors":"A. Widodo, Wudianto Wudianto, L. Sadiyah, Mahiswara Mahiswara, C. Proctor, S. Cooper","doi":"10.15578/ifrj.26.2.2020.83-96","DOIUrl":"https://doi.org/10.15578/ifrj.26.2.2020.83-96","url":null,"abstract":"The use of anchored fish aggregating devices (a-FADs) in the Indonesia-Indian Ocean has increased rapidly. Since 2004, the Government of Indonesia has issued various FAD related fisheries regulations; however, its implementation was difficult, largely due to the lack of such information. As an endeavor to improve the management of tuna fisheries associated with FADs in this area, an Indonesia–Australia research collaboration project conducted a port sampling program from November 2013 to December 2015 in three key fishing ports in the western Indonesia, i.e., Pelabuhanratu (West Jawa), Muara Padang (West Sumatera), and Bungus (West Sumatera). Data were collected through daily enumeration and interviews with skippers, which consisted of catch, trip duration, biological data, and number of FADs visited. These data were analyzed to estimate catch rate, success rate, and length frequency distribution. The success rate of hand line/trolling line (HL/TR) at Muara Padang showed much lower than that at Pelabuhanratu. This may be due to more a-FADs or higher density in the Padang region, competing with purse seine (PS) boats operating in the same area, than those in the Pelabuhanratu region. The species composition caught by HL/TR and PS associated a-FADs in Indonesian FMA 572 and 573 include skipjack (SKJ, Katsuwonus pelamis), yellowfin (YFT, Thunnus albacares) and bigeye tuna (BET, T. obesus). A large proportion of the SKJ, YFT and BET caught at both Indonesian FMA 572 and 573 were juvenile fish, below the reported length at maturity (L m ) for those species.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"83"},"PeriodicalIF":0.0,"publicationDate":"2020-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48310723","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"COMMUNITY STRUCTURE AND TROPHIC STATUS OF REEF FISH IN NATUNA WATERS","authors":"I. N. Edrus, P. Lestari","doi":"10.15578/ifrj.26.2.2020.69-82","DOIUrl":"https://doi.org/10.15578/ifrj.26.2.2020.69-82","url":null,"abstract":"A field research on reef fish-community structures in Natuna waters was carried out in November 2015. This research aimed to obtain the trophic composition of reef fishes and its correlation to diversity, density, and biomass. Underwater visual census on several transect areas was used to collect data. Results show that the identified reef fishes were about 100 species of target-reef fish belonging to 18 families and 23 species of indicator-reef fish of the Chaetodontidae family. The mean species number of target reef fish and indicator reef fish were 42 and 7 species, respectively. The mean density of the target reef fish and indicator reef fish were 0.4 and 0.05 individual per m respectively. The mean of the reef fish relative stock was 0.6 ton/ha. The composition of the herbivores mostly found in the resilient coral reefs r was 46.45 % and the omnivores and planktivores as marketable targeted fishes were 18.64 % and 14.28 %, respectively. The most predominant or major families were from herbivorous, carnivorous, planktivorous, and corallivorous fishes, including Scaridae (i.e. Scarus spp), Lutjanidae (i.e. Lutjanus spp.), Caesionidae (i,e. Caesio cuning and Pterocaesio caerulaurea), and Chaetodontidae (i.e. Chaetodon baronessa and Chaetodon octofasciatus). The results suggested that the community structures were quite prospectively implemented for fisheries; however, it may not be promising for coral resilience. Furthermore, the coral health status was at moderate level in regard to the high numbers of corallivorous butterflyfishes.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"69"},"PeriodicalIF":0.0,"publicationDate":"2020-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49524959","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"STUDY ON SPECIES COMPOSITION OF JUVENILE TUNA CAUGHT BY PURSE SEINE FLEET LANDING IN TAMPERAN FISHING PORT, JAVA, INDONESIA","authors":"R. R. Zedta, B. Setyadji","doi":"10.15578/IFRJ.26.2.2020.61-67","DOIUrl":"https://doi.org/10.15578/IFRJ.26.2.2020.61-67","url":null,"abstract":"Juvenile yellowfin tuna (Thunnus albacares) and bigeye tuna (T. obesus) are very similar in morphological characteristics, hence it is difficult to distinguish between these two species, especially when they are landed in frozen or defect conditions. The presence of juvenile bigeye tuna in yellowfin catch was first noticed in the 1980s from pole and line fisheries in Maldives. We analyzed the monthly composition structure of juvenile tuna caught by purse seine fleet operating in the South Indian Ocean. Tamperan fishing port was chosen for benchmarking to other small-scale fisheries. The result is expected to be used as an index for increasing the accuracy of juvenile tuna proportion for national catch statistics. A total of 4760 juvenile tunas were examined during monitoring activities. The length ranged 19-65 cm FL with median 40 cm FL for juvenile yellowfin tuna and 44 cm for juvenile bigeye. The whole weight of juvenile tuna ranged from 5 to 7 kg. The length-weight conversion for both species are W = 0.0184*FL3.0086 (R2 = 0.95, n = 4144) for juvenile yellowfin tuna and W = 0.018*FL3.0047 (R2 = 0.93, n = 346) for juvenile bigeye tuna. It can be inferred from the study that in terms of catch proportion of juvenile tuna, it consists of ratio 10:1, whereas for every 10 kg of juvenile tuna contains approximately one kg of bigeye tuna. Besides, the length-weight equation for both species is interchangeable, which means either equation can be performed to convert length to weight for both juvenile yellowfin and bigeye tuna.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"61-67"},"PeriodicalIF":0.0,"publicationDate":"2020-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49346452","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"MAPPING THE POTENTIAL OF MARINE LIVING RESOURCES IN OUTER ISLAND OF SOUTHWEST MOLUCCAS","authors":"Thomas Mahulette, A. S. Samusamu","doi":"10.15578/ifrj.26.1.2020.19-32","DOIUrl":"https://doi.org/10.15578/ifrj.26.1.2020.19-32","url":null,"abstract":"Southwest Moluccas or Maluku Barat Daya (MBD) District is one of the small islands located in the southeastern part of outer ring of Indonesian Archipelagic States. There are 17 sub districts covering 48 islands lie scattered in the region in which 31 islands among them were not inhabited. The island has a total population of about 72.300, while 4.069 (5.6 %) are fisherman. The annual fish production in 2017 was reported at 8,971 tons consists of: small pelagic fish (48%), demersal (37%), and large pelagic (15%). The coastal ecosystems include of coral reefs (595 Ha), mangrove (7.8 Ha), and sea grass (57 Ha). Seaweed harvesting and cultivation are ones that would be developed as an alternate livelihood for the community. The goal of this research was to describe a general situation of community livelihood that supported by the role of marine fisheries. The general description of fishing boat and fishing gear, annual production, distribution of fisherman and household around the islands were discussed. The fisheries category were small scale within about one day fishing. The environmental parameters such as monthly air temperature, rainfall and wind speed were plotted as supporting information. The population distribution and fisherman were also used as a base line parameter to elaborate the potential of marine living resource in the interested area. Those resources were described with existing small scale fisheries issues based on limited serial data that gathered through field observation. The secondary data such as Mollucas Southwest District (MBD) annual data from the Local Statistical Board (BPS) annual report were also used in this paper.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"19-32"},"PeriodicalIF":0.0,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49043496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"STOCK STATUS OF BLUE SWIMMING CRAB (Portunus pelagicus) IN TANAH LAUT, SOUTH KALIMANTAN, AND ITS ADJACENT WATERS","authors":"A. Suman, Ap’idatul Hasanah, A. Pane, P. Lestari","doi":"10.15578/ifrj.26.1.2020.51-60","DOIUrl":"https://doi.org/10.15578/ifrj.26.1.2020.51-60","url":null,"abstract":"A study on the stock status of blue swimming crab (Portunus pelagicus Linnaeus, 1758) was conducted in Tanah Laut, South Kalimantan waters, based on data collected in March to November 2017. The results showed that the growth pattern of blue swimming crab in Tanah Laut waters was negatively allometric and the sex ratio of males to females was 1.0 : 1.7. The chi-square test indicated that the total males and total females of the blue swimming crab was significantly different. It means that there was an imbalance in numbers between males and females. The estimated length at first capture (Lc) was 127.26 mm (carapace width; CW), smaller than the length at first maturity (Lm) at 133.24 mmCW. The growth parameter of blue swimming crab was 1.1year with a maximum carapace width (L) of 204.3 mmCW. The estimated instantaneous total mortality (Z) and natural mortality (M) were 3.04/year and 1.24/year, respectively. While fishing mortality (F) and exploitation rate (E) were 1.80/year and 0.59/year, respectively, the estimated spawning potential ratio (SPR) was 11.1 %. Therefore, the stock status was categorized as overfishing. In order to ensure the sustainability of the blue swimming crab, a precautionary approach,, such as reducing fishing effort by 18 % of the current situation, is strongly recommended to apply.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"51-60"},"PeriodicalIF":0.0,"publicationDate":"2020-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42669961","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"THE IMPACT OF ENVIRONMENTAL CHANGES ON BLACK MARLIN, Makaira indica (Cuvier, 1832) ABUNDANCES IN THE EASTERN INDIAN OCEAN","authors":"B. Setyadji, Z. Fahmi","doi":"10.15578/ifrj.26.1.2020.41-49","DOIUrl":"https://doi.org/10.15578/ifrj.26.1.2020.41-49","url":null,"abstract":"Black marlin (Makaira indica) is commonly caught as frozen by-catch from Indonesian tuna longline fleets. Its contribution estimated 18% (~2,500 tons) from total catch in Indian Ocean. Relative abundance indices as calculated based on commercial catches are the input data for several to run stock assessment analyses that provide models to gather information useful information for decision making and fishery management, however, little are known about the influence of environmental factors to its abundance. In this paper, the abundance was represented as standardized index in order to eliminate any bias on other factors which might influence it. Data were collected from August 2005 to December 2017 through scientific observer program (2005-2017) and national observer program (2016-2017). Most of the vessels monitored were based in Benoa Port, Bali. Overall, time trends of abundance was fluctuated, although, there was increasing trend since 2010 then dropped significantly into relatively similar figure in 2005. Even though, Sea Surface Temperature (SST) and Sea Surface Height (SSH) were statistically significant when incorporating into the models, but it allegedly wasn’t the main driver in determining the abundance of black marlin. Instead, it was more likely driven by spatio-temporal factors (year and area) effect rather than environmental changes.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"41-49"},"PeriodicalIF":0.0,"publicationDate":"2020-04-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44872689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alexander M. A. Khan, L. P. Dewanti, I. Apriliani, D. Supriadi, A. M. Nasution, T. Gray, A. Mill, N. Polunin
{"title":"STUDY ON MARKET PROCESS OF TUNA POLE-AND-LINE FISHERY IN EASTERN INDONESIA: A STUDY CASE IN SORONG, PAPUA BARAT PROVINCE","authors":"Alexander M. A. Khan, L. P. Dewanti, I. Apriliani, D. Supriadi, A. M. Nasution, T. Gray, A. Mill, N. Polunin","doi":"10.15578/ifrj.26.1.2020.33-39","DOIUrl":"https://doi.org/10.15578/ifrj.26.1.2020.33-39","url":null,"abstract":"This research is a study of the way the small-scale pole-and-line tuna fishery in Sorong, Indonesia by examining official records of supply chains; key informant and fishers’ perceptions of marketing; and personal observations of landings and selling. The main finding of the study is that the pole-and-line fishers in Sorong have made strenuous efforts to escape the constrictions of middlemen by direct selling to processors.","PeriodicalId":31292,"journal":{"name":"Indonesian Fisheries Research Journal","volume":"26 1","pages":"33-39"},"PeriodicalIF":0.0,"publicationDate":"2020-04-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46903401","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}