{"title":"A Genetic Algorithm for Scale-Based Translocon Simulation","authors":"Sami Laroum, B. Duval, D. Tessier, Jin-Kao Hao","doi":"10.1007/978-3-642-34123-6_3","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_3","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130665814","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Improving the Portability and Performance of jViz.RNA - A Dynamic RNA Visualization Software","authors":"Boris Shabash, K. Wiese, E. Glen","doi":"10.1007/978-3-642-34123-6_8","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_8","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"199 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122755432","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Robust Community Detection Methods with Resolution Parameter for Complex Detection in Protein Protein Interaction Networks","authors":"T. V. Laarhoven, E. Marchiori","doi":"10.1007/978-3-642-34123-6_1","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_1","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128532723","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Finding Conserved Regions in Protein Structures Using Support Vector Machines and Structure Alignment","authors":"T. Akutsu, M. Hayashida, Takeyuki Tamura","doi":"10.1007/978-3-642-34123-6_21","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_21","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"2677 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124743415","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
João Cardoso, Paulo Vilaça, Simão Soares, Miguel Rocha
{"title":"An Algorithm to Assemble Gene-Protein-Reaction Associations for Genome-Scale Metabolic Model Reconstruction","authors":"João Cardoso, Paulo Vilaça, Simão Soares, Miguel Rocha","doi":"10.1007/978-3-642-34123-6_11","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_11","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129155508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Protein Clustering on a Grassmann Manifold","authors":"Chendra Hadi Suryanto, Hiroto Saigo, K. Fukui","doi":"10.1007/978-3-642-34123-6_7","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_7","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"37 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125354699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Framework of Gene Subset Selection Using Multiobjective Evolutionary Algorithm","authors":"Yifeng Li, A. Ngom, L. Rueda","doi":"10.1007/978-3-642-34123-6_4","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_4","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"34 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128619850","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Representation of Protein Secondary Structure Using Bond-Orientational Order Parameters","authors":"Cem Meydan, O. U. Sezerman","doi":"10.1007/978-3-642-34123-6_17","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_17","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"46 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116449075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Aligning Discovered Patterns from Protein Family Sequences","authors":"E. Lee, Dennis Zhuang, A. Wong","doi":"10.1007/978-3-642-34123-6_22","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_22","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"55 43 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128129717","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cascading Discriminant and Generative Models for Protein Secondary Structure Prediction","authors":"Fabienne Thomarat, Fabien Lauer, Y. Guermeur","doi":"10.1007/978-3-642-34123-6_15","DOIUrl":"https://doi.org/10.1007/978-3-642-34123-6_15","url":null,"abstract":"","PeriodicalId":286859,"journal":{"name":"Pattern Recognition in Bioinformatics","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114065457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}