Persoonia - Molecular Phylogeny and Evolution of Fungi最新文献

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Wild rodents harbour high diversity of Arthroderma 野生啮齿类动物具有较高的节肢动物多样性
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2023.50.02
Š. Moulíková, M. Kolařík, J. Lorch, D. Kolarczyková, V. Hubka, A. Čmoková
{"title":"Wild rodents harbour high diversity of Arthroderma","authors":"Š. Moulíková, M. Kolařík, J. Lorch, D. Kolarczyková, V. Hubka, A. Čmoková","doi":"10.3767/persoonia.2023.50.02","DOIUrl":"https://doi.org/10.3767/persoonia.2023.50.02","url":null,"abstract":"\u0000 Arthroderma is the most diverse genus of dermatophytes, and its natural reservoir is considered to be soil enriched by keratin sources. During a study on the diversity of dermatophytes in wild small rodents in the Czech Republic, we isolated several strains of Arthroderma. To explore the diversity and ecological significance of these isolates from rodents (n = 29), we characterised the strains genetically (i.e., sequenced ITS, tubb and tef1α), morphologically, physiologically, and by conducting mating experiments. We then compared the rodent-derived strains to existing ITS sequence data from GenBank and the GlobalFungi Database to further investigate biogeography and the association of Arthroderma species with different types of environments. In total, eight Arthroderma species were isolated from rodents, including four previously described species (A. crocatum, A. cuniculi, A. curreyi, A. quadrifidum) and four new species proposed herein, i.e., A. rodenticum, A. simile, A. zoogenum and A. psychrophilum. The geographical distribution of these newly described species was not restricted to the Czech Republic nor rodents. Additional isolates were obtained from bats and other mammals, reptiles, and soil from Europe, North America, and Asia. Data mining showed that the genus has a diverse ecology, with some lineages occurring relatively frequently in soil, whereas others appeared to be more closely associated with live animals, as we observed in A. rodenticum. Low numbers of sequence reads ascribed to Arthroderma in soil show that the genus is rare in this environment, which supports the hypothesis that Arthroderma spp. are not soil generalists but rather strongly associated with animals and keratin debris. This is the first study to utilise existing metabarcoding data to assess biogeographical, ecological, and diversity patterns in dermatophytes.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116992521","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Phylogeny, taxonomy, and character evolution in Entoloma subgenus Nolanea 肠虫亚属的系统发育、分类和性状演化
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.49.04
K. Reschke, O. Morozova, B. Dima, J. Cooper, G. Corriol, A. Biketova, M. Piepenbring, M. Noordeloos
{"title":"Phylogeny, taxonomy, and character evolution in Entoloma subgenus Nolanea","authors":"K. Reschke, O. Morozova, B. Dima, J. Cooper, G. Corriol, A. Biketova, M. Piepenbring, M. Noordeloos","doi":"10.3767/persoonia.2022.49.04","DOIUrl":"https://doi.org/10.3767/persoonia.2022.49.04","url":null,"abstract":"\u0000 Nolanea is a well-known and long-established subgenus of the genus Entoloma traditionally defined mainly by the mycenoid basidiocarps of the included species. Until now, revisions of this subgenus including molecular data exist only on a regional scale. In this study, the phylogeny of species of Nolanea is analysed based on multi-gene DNA sequences including data of specimens from all continents. New primers are designed for the mitochondrial small subunit and RPB2. The performance of the DNA loci in reconstructing the phylogeny in subg. Nolanea is evaluated. An ancestral state reconstruction is used to infer the character state evolution as well as the importance and reliability of morphological characters used to define subclades below subgeneric rank. Based on the results, seven sections are recognised in Nolanea: the sections Holoconiota, Infularia, Mammosa, Nolanea, Papillata, Staurospora, and the newly described sect. Elegantissima. A large phylogeny based on the fungal barcode rDNA ITS with numerous type sequences is used to evaluate current species concepts. Several names are revealed to be synonyms of older names. Four species new to science are described, namely E. altaicum, E. argillaceum, E. cornicolor, and E. incognitum. Lectotypes, epitypes or neotypes are designated for E. cetratum, E. clandestinum, E. conferendum, E. cuspidiferum, E. hebes, E. minutum, E. nitens, and E. rhodocylix. The re-evaluation of the limits of subg. Nolanea leads to an altered concept excluding species with distinct, lageniform cheilocystidia. The section Ameides is placed in subg. Leptonia. For several species formerly accommodated in Nolanea, but excluded now, viz., E. lepiotoides, E. rhombisporum, E. subelegans, and E. velenovskyi the taxonomic position remains unclear, because of the yet unresolved phylogeny of the whole genus Entoloma.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"505 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122901475","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
More smooth-spored species of Inocybe (Agaricales, Basidiomycota): type studies and 12 new species from Europe 更多的无孢子虫(真菌门,担子菌门):类型研究和来自欧洲的12个新种
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.48.03
D. Bandini, B. Oertel, U. Eberhardt
{"title":"More smooth-spored species of Inocybe (Agaricales, Basidiomycota): type studies and 12 new species from Europe","authors":"D. Bandini, B. Oertel, U. Eberhardt","doi":"10.3767/persoonia.2022.48.03","DOIUrl":"https://doi.org/10.3767/persoonia.2022.48.03","url":null,"abstract":"\u0000 Twelve new species of Inocybe (I. adorabilis, I. comis, I. demetris, I. filiana, I. galactica, I. morganae, I. othini, I. ovilla, I. proteica, I. somae, I. suryana and I. venerabilis) are described from Europe on the basis of detailed morphological and molecular investigation. A portrait of the recently described I. ianthinopes is given. All species are smooth-spored and some pruinose only in the apical part of the stipe, and some on entire length. The new species are compared to 24 type specimens (17 characterized by at least partial ITS sequence data), all of which are described and revised here. Epitypes were selected for two species, I. hirtella and I. sindonia. Based on our studies, we confirm that I. kuehneri and I. sindonia on one hand, and I. subalbidodisca and I. ochroalba on the other, are synonyms and furthermore suggest that I. abietis is synonymous with I. catalaunica, I. exilis with I. rufobrunnea, I. hirtellarum with I. mycenoides, I. lapidicola with I. deianae, I. ochraceolutea with I. sindonia, I. stangliana with I. pelargonium, I. subrubens with I. subhirtella and I. sulfovirescens with I. langei. All of the new species are supported by phylogenetic analyses. Among the 16 previously described species accepted here, 10 are represented by types in the phylogenetic analyses and five by own collections corresponding to the type. Two species, I. eutheloides (remaining doubtful) and I. pallidolutea are only treated morphologically. In summary, we describe as new or verify the taxonomic status and provide or corroborate morphological concepts for 37 smooth-spored species of Inocybe.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"16 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114332203","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Multigene phylogeny of the order Physarales (Myxomycetes, Amoebozoa): shedding light on the dark-spored clade 黏菌目(黏菌纲,阿米巴虫纲)的多基因系统发育:揭示暗孢子进化支
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2023.51.02
J. M. García-Martín, J. C. Zamora, C. Lado
{"title":"Multigene phylogeny of the order Physarales (Myxomycetes, Amoebozoa): shedding light on the dark-spored clade","authors":"J. M. García-Martín, J. C. Zamora, C. Lado","doi":"10.3767/persoonia.2023.51.02","DOIUrl":"https://doi.org/10.3767/persoonia.2023.51.02","url":null,"abstract":"\u0000 The class Myxomycetes consists of free-living protists characterised by their complex life cycle, which includes both microscopic (amoebae, flagellates and cists) and macroscopic stages (spore-bearing fruiting bodies, sclerotia, and plasmodia). Within it, the order Physarales, with more than 450 recognised species, constitutes the largest group. Although previous studies have shown the polyphyly of some of the traditionally accepted genera, its internal phylogenetic relationships have remained uncertain so far, and together with the lack of data for some key species, it prevented any taxonomic and nomenclatural revisions. We have compiled a substantially expanded dataset in terms of both taxon sampling and molecular data, including most of the genera described to date and four unlinked DNA regions, for which we provide partial sequences: nSSU, EF-1α, α-Tub, and mtSSU, analysed through maximum likelihood and Bayesian methods. Our results confirm that the family Didymiaceae is paraphyletic to the rest of Physarales. Within Didymiaceae s.lat., the recent reinstatement of the genus Polyschismium for most species traditionally ascribed to Lepidoderma, except for the type (Ronikier et al. 2022), is further supported here, as well as the definite inclusion of the genus Mucilago in Didymium and Lepidoderma s.str. (L. tigrinum) in Diderma (Prikhodko et al. 2023). Additionally, the genus Diachea is redefined to include some species pre­viously treated in Physaraceae (Craterium spp. with true columella). Within the monophyletic family Physaraceae, most genera are recovered as polyphyletic, suggesting that they should be no longer accepted as currently defined. However, the lack of resolution of some relationships within Physaraceae prevents us from resuscitating or creating several new genera to mitigate polyphyly. Among the well-defined groups with clear molecular signatures, we propose two taxonomic and nomenclatural changes at generic level: 1) a new genus, Nannengaella, is proposed for a major clade containing Physarum globuliferum and other species with heavily calcified sporophores and, often, a true calcareous columella; 2) Lignydium is resurrected for the clade containing Fuligo muscorum. Additionally, Trichamphora is suggested as the correct name for the clade containing Physarum pezizoideum. The taxonomy and nomenclature of some provisional genera, currently synonymous with Fuligo and Physarum, are disentangled, and we provide a comprehensive and updated nomenclatural conspectus that can be used when better resolved phylogenies are obtained. In total, 22 new combinations are proposed in different genera. A provisional key to the genera of the order is also provided.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"24 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117130590","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
From cradle to grave? A global hotspot and new species of the genus Lobaria discovered in the Himalayas and the Hengduan Mountains 从摇篮到坟墓?喜马拉雅山脉和横断山脉发现的洛巴利亚属的全球热点和新种
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.48.04
M.X. Yang, L.S. Wang, C. Miao
{"title":"From cradle to grave? A global hotspot and new species of the genus Lobaria discovered in the Himalayas and the Hengduan Mountains","authors":"M.X. Yang, L.S. Wang, C. Miao","doi":"10.3767/persoonia.2022.48.04","DOIUrl":"https://doi.org/10.3767/persoonia.2022.48.04","url":null,"abstract":"\u0000 In this study, the East Asian diversity of green-algal Lobaria was evaluated by applying both morphological and phylogenetic approaches. A multi-locus phylogenetic analysis of 72 green-algal Lobaria specimens was performed using a three-locus and time-calibrated species-tree approach. The analyses demonstrate that pairs of sexually and vegetatively reproducing lineages split into highly supported monophyletic clades. Taxonomically, 11 green-algal Lobaria species were identified as new to science, while 10 were previously described species. The species differentiated during the Pliocene and Pleistocene. The coincidence of paleoclimatic events with estimated dates of divergence support a bioclimatic hypothesis for species evolution in the green-algal Lobaria. Molecular phylogenies, a summary of diversity, detailed new species descriptions and geographical analyses are provided. Special recognition of species with a long evolutionary history, which merit high conservation priority, will be critical for preserving geographically restricted endemics in the Himalayas and the Hengduan Mountains, where habitat loss is driving rapid declines.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"42 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"127619867","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Fusarium and allied genera from China: species diversity and distribution 中国镰刀菌属及其近缘属:物种多样性和分布
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.48.01
M.M. Wang, P. Crous, M. Sandoval-Denis, S.L. Han, F. Liu, J.M. Liang, W. Duan, L. Cai
{"title":"Fusarium and allied genera from China: species diversity and distribution","authors":"M.M. Wang, P. Crous, M. Sandoval-Denis, S.L. Han, F. Liu, J.M. Liang, W. Duan, L. Cai","doi":"10.3767/persoonia.2022.48.01","DOIUrl":"https://doi.org/10.3767/persoonia.2022.48.01","url":null,"abstract":"\u0000 The genus Fusarium includes numerous important plant and human pathogens, as well as many industrially and commercially important species. During our investigation of fungal diversity in China, a total of 356 fusarioid isolates were obtained and identified from diverse diseased and healthy plants, or different environmental habitats, i.e., air, carbonatite, compost, faeces, soil and water, representing hitherto one of the most intensive sampling and identification efforts of fusarioid taxa in China. Combining morphology, multi-locus phylogeny and ecological preference, these isolates were identified as 72 species of Fusarium and allied genera, i.e., Bisifusarium (1), Fusarium (60), and Neocosmospora (11). A seven-locus dataset, comprising the 5.8S nuclear ribosomal RNA gene with the two flanking internal transcribed spacer (ITS) regions, the intergenic spacer region of the rDNA (IGS), partial translation elongation factor 1-alpha (tef1), partial calmodulin (cam), partial RNA polymerase largest subunit (rpb1), partial RNA polymerase second largest subunit (rpb2) gene regions, and partial β-tubulin (tub2), were sequenced and employed in phylogenetic analyses. A genus-level phylogenetic tree was constructed using combined tef1, rpb1, and rpb2 sequences, which confirmed the presence of four fusarioid genera among the isolates studied. Further phylogenetic analyses of two allied genera (Bisifusarium and Neocosmospora) and nine species complexes of Fusarium were separately conducted employing different multi-locus datasets, to determine relationships among closely related species. Twelve novel species were identified and described in this paper. The F. babinda species complex is herein renamed as the F. falsibabinda species complex, including descriptions of new species. Sixteen species were reported as new records from China.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"2007 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125978718","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 15
Re-evaluation of Sympoventuriaceae 刺蒺藜科植物的再评价
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.48.07
T. Wei, H. Zhang, X. Zeng, P. Crous, Y.L. Jiang
{"title":"Re-evaluation of Sympoventuriaceae","authors":"T. Wei, H. Zhang, X. Zeng, P. Crous, Y.L. Jiang","doi":"10.3767/persoonia.2022.48.07","DOIUrl":"https://doi.org/10.3767/persoonia.2022.48.07","url":null,"abstract":"\u0000 Sympoventuriaceae (Venturiales, Dothideomycetes) comprises genera including saprophytes, endophytes, plant pathogens, as well as important animal or human opportunistic pathogens with diverse ecologies and wide geographical distributions. Although the taxonomy of Sympoventuriaceae has been well studied, generic boundaries within the family remain poorly resolved due to the lack of type materials and molecular data. To address this issue and establish a more stable and reliable classification system in Sympoventuriaceae, we performed multi-locus phylogenetic analyses using sequence data of seven genes (SSU, ITS, LSU, act1, tub2, tef1 and rpb2) with increased taxon sampling and morphological analysis. The molecular data combined with detailed morphological studies of 143 taxa resolved 22 genera within the family, including one new genus, eight new species, five new combinations and one new name. Finally, we further investigated the evolutionary history of Sympoventuriaceae by reconstructing patterns of lifestyle diversification, indicating the ancestral state to be saprophytic, with transitions to endophytic, animal or human opportunistic and plant pathogens.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"35 3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126774937","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
High species richness in the lichen genus Peltigera (Ascomycota, Lecanoromycetes): 34 species in the dolichorhizoid and scabrosoid clades of section Polydactylon, including 24 new to science 高物种丰富度的Peltigera地衣属(子囊菌科,Lecanoromycetes):在多趾龙科的dolichorhizoid和scabrososoid分支中有34种,其中24种是新发现的
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2023.51.01
N. Magain, J. Miadlikowska, B. Goffinet, T. Goward, C. J. Pardo-de La Hoz, I. Jüriado, A. Simon, J. A. Mercado‐Díaz, T. Barlow, B. Moncada, R. Lücking, A. Spielmann, L. Canêz, L.S. Wang, P. Nelson, T. Wheeler, F. Lutzoni, E. Sérusiaux
{"title":"High species richness in the lichen genus Peltigera (Ascomycota, Lecanoromycetes): 34 species in the dolichorhizoid and scabrosoid clades of section Polydactylon, including 24 new to science","authors":"N. Magain, J. Miadlikowska, B. Goffinet, T. Goward, C. J. Pardo-de La Hoz, I. Jüriado, A. Simon, J. A. Mercado‐Díaz, T. Barlow, B. Moncada, R. Lücking, A. Spielmann, L. Canêz, L.S. Wang, P. Nelson, T. Wheeler, F. Lutzoni, E. Sérusiaux","doi":"10.3767/persoonia.2023.51.01","DOIUrl":"https://doi.org/10.3767/persoonia.2023.51.01","url":null,"abstract":"\u0000 Applying molecular methods to fungi establishing lichenized associations with green algae or cyanobacteria has repeatedly revealed the existence of numerous phylogenetic taxa overlooked by classical taxonomic approaches. Here, we report taxonomical conclusions based on multiple species delimitation and validation analyses performed on an eight-locus dataset that includes world-wide representatives of the dolichorhizoid and scabrosoid clades in section Polydactylon of the genus Peltigera. Following the recommendations resulting from a consensus species delimitation approach and additional species validation analysis (BPP) performed in this study, we present a total of 25 species in the dolichorhizoid clade and nine in the scabrosoid clade, including respectively 18 and six species that are new to science and formally described. Additionally, one combination and three varieties (including two new to science) are proposed in the dolichorhizoid clade. The following 24 new species are described: P. appalachiensis, P. asiatica, P. borealis, P. borinquensis, P. chabanenkoae, P. clathrata, P. elixii, P. esslingeri, P. flabellae, P. gallowayi, P. hawaiiensis, P. holtanhartwigii, P. itatiaiae, P. hokkaidoensis, P. kukwae, P. massonii, P. mikado, P. nigriventris, P. orientalis, P. rangiferina, P. sipmanii, P. stanleyensis, P. vitikainenii and P. willdenowii; the following new varieties are introduced: P. kukwae var. phyllidiata and P. truculenta var. austroscabrosa; and the following new combination is introduced: P. hymenina var. dissecta. Each species from the dolichorhizoid and scabrosoid clades is morphologically and chemically described, illustrated, and characterised with ITS sequences. Identification keys are provided for the main biogeographic regions where species from the two clades occur. Morphological and chemical characters that are commonly used for species identification in the genus Peltigera cannot be applied to unambiguously recognise most molecularly circumscribed species, due to high variation of thalli formed by individuals within a fungal species, including the presence of distinct morphs in some cases, or low interspecific variation in others. The four commonly recognised morphospecies: P. dolichorhiza, P. neopolydactyla, P. pulverulenta and P. scabrosa in the dolichorhizoid and scabrosoid clades represent species complexes spread across multiple and often phylogenetically distantly related lineages. Geographic origin of specimens is often helpful for species recognition; however, ITS sequences are frequently required for a reliable identification.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"40 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125648848","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications 疫霉Clade 10中14个新种和7个已描述种的广泛形态和行为多样性及其进化意义
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.49.01
T. Jung, I. Milenković, T. Corcobado, T. Majek, J. Janoušek, T. Kudláček, M. Tomšovský, Z. Nagy, A. Duran, M. Tarigan, E. Sanfuentes von Stowasser, R. Singh, M. Ferreira, J. Webber, B. Scanu, N. Chi, P. Thu, M. Junaid, A. Rosmana, B. Baharuddin, T. Kuswinanti, N. Nasri, K. Kageyama, A. Hieno, H. Masuya, S. Uematsu, J. Oliva, M. Redondo, C. Maia, I. Matsiakh, V. Kramarets, R. O'Hanlon, Z. Tomić, C. Brasier, M. Horta Jung
{"title":"Extensive morphological and behavioural diversity among fourteen new and seven described species in Phytophthora Clade 10 and its evolutionary implications","authors":"T. Jung, I. Milenković, T. Corcobado, T. Majek, J. Janoušek, T. Kudláček, M. Tomšovský, Z. Nagy, A. Duran, M. Tarigan, E. Sanfuentes von Stowasser, R. Singh, M. Ferreira, J. Webber, B. Scanu, N. Chi, P. Thu, M. Junaid, A. Rosmana, B. Baharuddin, T. Kuswinanti, N. Nasri, K. Kageyama, A. Hieno, H. Masuya, S. Uematsu, J. Oliva, M. Redondo, C. Maia, I. Matsiakh, V. Kramarets, R. O'Hanlon, Z. Tomić, C. Brasier, M. Horta Jung","doi":"10.3767/persoonia.2022.49.01","DOIUrl":"https://doi.org/10.3767/persoonia.2022.49.01","url":null,"abstract":"\u0000 During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA (Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil- and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenuimura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors > 175 Mya into water- and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134579934","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Phylogeny and taxonomy of Circinotrichum, Gyrothrix, Vermiculariopsiella and other setose hyphomycetes 环孢菌、旋丝菌、蛭孢菌及其它丝孢菌的系统发育与分类
Persoonia - Molecular Phylogeny and Evolution of Fungi Pub Date : 1900-01-01 DOI: 10.3767/persoonia.2022.49.03
M. Hernández-Restrepo, C. Decock, M. M. Costa, P. Crous
{"title":"Phylogeny and taxonomy of Circinotrichum, Gyrothrix, Vermiculariopsiella and other setose hyphomycetes","authors":"M. Hernández-Restrepo, C. Decock, M. M. Costa, P. Crous","doi":"10.3767/persoonia.2022.49.03","DOIUrl":"https://doi.org/10.3767/persoonia.2022.49.03","url":null,"abstract":"\u0000 Circinotrichum, Gyrothrix and Vermiculariopsiella represent a complex of dematiaceous, setose, saprobic hyphomycetes that are commonly collected on plant litters in tropical, subtropical to temperate climates. Multi-locus analysis (ITS, LSU, rpb2) and morphological studies revealed that Gyrothrix and Circinotrichum are polyphyletic and species belong to 10 genera grouping in three different clades within Xylariales, named Coniocessiaceae (Circinotrichum and Pirozynskiomyces gen. nov.), Microdochiaceae (Selenodriella and the resurrected genus Peglionia) and the new family Gyrothricaceae (Gyrothrix, Xenoanthostomella, Neogyrothrix gen. nov., Pseudocircinotrichum gen. nov., and Pseudoceratocladium gen. nov.). Vermiculariopsiella (Vermiculariopsiellales, Vermiculariopsiellaceae) is emended for species with setose sporodochia with simple setae (V. dichapetali, V. eucalypticola, V. immersa, V. pini, V. spiralis, V. australiensis sp. nov.) while Vermiculariopsis is resurrected and includes setose fungi with branched setae (Vs. dunni, Vs. eucalypti, Vs. eucalyptigena, Vs. lauracearum, Vs. microsperma, Vs. pediculata and Vs. castanedae sp. nov.).\u0000","PeriodicalId":231183,"journal":{"name":"Persoonia - Molecular Phylogeny and Evolution of Fungi","volume":"326 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132369198","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
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