Molecular and Cellular Neuroscience最新文献

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Compartment specific mitochondrial dysfunction in Drosophila knock-in model of ALS reversed by altered gene expression of OXPHOS subunits and pro-fission factor Drp1 通过改变OXPHOS亚基和前裂变因子Drp1的基因表达逆转果蝇ALS敲入模型中的室特异性线粒体功能障碍
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103834
Y. Nemtsova , B.L. Steinert , K.A. Wharton
{"title":"Compartment specific mitochondrial dysfunction in Drosophila knock-in model of ALS reversed by altered gene expression of OXPHOS subunits and pro-fission factor Drp1","authors":"Y. Nemtsova ,&nbsp;B.L. Steinert ,&nbsp;K.A. Wharton","doi":"10.1016/j.mcn.2023.103834","DOIUrl":"10.1016/j.mcn.2023.103834","url":null,"abstract":"<div><p><span><span>Amyotrophic Lateral Sclerosis<span> (ALS) is a fatal multisystem neurodegenerative disease, characterized by a loss in motor function. ALS is genetically diverse, with mutations in genes ranging from those regulating </span></span>RNA metabolism, like </span><em>TAR DNA-binding protein (TDP-43)</em> and <em>Fused in sarcoma (FUS),</em><span> to those that act to maintain cellular redox homeostasis, like </span><span><em>superoxide dismutase 1</em><em> (SOD1)</em></span><span><span>. Although varied in genetic<span> origin, pathogenic and clinical commonalities are clearly evident between cases of ALS. Defects in mitochondria is one such common pathology, thought to occur prior to, rather than as a consequence of symptom onset, making these organelles a promising therapeutic target for ALS, as well as other neurodegenerative diseases. Depending on the homeostatic needs of neurons throughout life, mitochondria are normally shuttled to different subcellular compartments to regulate metabolite and energy production, lipid metabolism, and buffer calcium. While originally considered a motor neuron disease due to the dramatic loss in motor function accompanied by motor neuron cell death in ALS patients, many studies have now implicated non-motor neurons and </span></span>glial cells alike. Defects in non-motor neuron cell types often preceed motor neuron death suggesting their dysfunction may initiate and/or facilitate the decline in motor neuron health. Here, we investigate mitochondria in a </span><em>Drosophila Sod1</em> knock-in model of ALS. In depth, <em>in vivo</em><span>, examination reveals mitochondrial dysfunction evident prior to onset of motor neuron degeneration. Genetically encoded redox biosensors identify a general disruption in the electron transport chain<span><span><span><span> (ETC). Compartment specific abnormalities in mitochondrial morphology is observed in diseased sensory neurons, accompanied by no apparent defects in the </span>axonal transport<span> machinery, but instead an increase in mitophagy in synaptic regions. The decrease in networked mitochondria at the synapse is reversed upon downregulation of the pro-fission factor </span></span>Drp1. Furthermore, altered expression of specific </span>OXPHOS subunits reverses ALS-associated defects in mitochondrial morphology and function.</span></span></p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103834"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247448/pdf/nihms-1894362.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9597173","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Corrigendum to Semaphorin 4C and 4G are ligands of Plexin-B2 required in cerebellar development [Mol. Cell. Neurosci., 2011 Feb;46(2):419–31] Semaphorin 4C和4G的更正是小脑发育所需的Plexin-B2配体[Mol.Cell.Neurosci.,2011年2月;46(2):419-31]
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103837
Viola Maier , Christine Jolicoeur , Helen Rayburn , Noriko Takegahara , Atsushi Kumanogoh , Hitoshi Kikutani , Marc Tessier-Lavigne , Wolfgang Wurst , Roland H. Friedel
{"title":"Corrigendum to Semaphorin 4C and 4G are ligands of Plexin-B2 required in cerebellar development [Mol. Cell. Neurosci., 2011 Feb;46(2):419–31]","authors":"Viola Maier ,&nbsp;Christine Jolicoeur ,&nbsp;Helen Rayburn ,&nbsp;Noriko Takegahara ,&nbsp;Atsushi Kumanogoh ,&nbsp;Hitoshi Kikutani ,&nbsp;Marc Tessier-Lavigne ,&nbsp;Wolfgang Wurst ,&nbsp;Roland H. Friedel","doi":"10.1016/j.mcn.2023.103837","DOIUrl":"10.1016/j.mcn.2023.103837","url":null,"abstract":"","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103837"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247391/pdf/nihms-1881558.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9650909","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Chemical tools for the opioids 阿片类药物的化学工具
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103845
Mark Anthony Leon Duque, Nandini Vallavoju, Christina M. Woo
{"title":"Chemical tools for the opioids","authors":"Mark Anthony Leon Duque,&nbsp;Nandini Vallavoju,&nbsp;Christina M. Woo","doi":"10.1016/j.mcn.2023.103845","DOIUrl":"10.1016/j.mcn.2023.103845","url":null,"abstract":"<div><p>The opioids are potent and widely used pain management medicines despite also possessing severe liabilities that have fueled the opioid crisis. The pharmacological properties of the opioids primarily derive from agonism or antagonism of the opioid receptors<span>, but additional effects may arise from specific compounds, opioid receptors, or independent targets. The study of the opioids, their receptors, and the development of remediation strategies has benefitted from derivatization of the opioids as chemical tools. While these studies have primarily focused on the opioids in the context of the opioid receptors, these chemical tools may also play a role in delineating mechanisms that are independent of the opioid receptors. In this review, we describe recent advances in the development and applications of opioid derivatives as chemical tools and highlight opportunities for the future.</span></p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103845"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247539/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9650921","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Long-term effects of amyloid-beta deposits in human iPSC-derived astrocytes β淀粉样蛋白沉积在人类ipsc来源的星形胶质细胞中的长期影响
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103839
Evangelos Konstantinidis, Abdulkhalek Dakhel, Chiara Beretta, Anna Erlandsson
{"title":"Long-term effects of amyloid-beta deposits in human iPSC-derived astrocytes","authors":"Evangelos Konstantinidis,&nbsp;Abdulkhalek Dakhel,&nbsp;Chiara Beretta,&nbsp;Anna Erlandsson","doi":"10.1016/j.mcn.2023.103839","DOIUrl":"10.1016/j.mcn.2023.103839","url":null,"abstract":"<div><p>Growing evidence indicates that astrocytes are tightly connected to Alzheimer's disease (AD) pathogenesis. However, the way in which astrocytes participate in AD initiation and progression remains to be clarified. Our previous data show that astrocytes engulf large amounts of aggregated amyloid-beta (Aβ) but are unable to successfully degrade the material. In this study, we aimed to evaluate how intracellular Aβ-accumulation affects the astrocytes over time. For this purpose, human induced pluripotent cell (hiPSC)-derived astrocytes were exposed to sonicated Aβ-fibrils and then cultured further for one week or ten weeks in Aβ-free medium. Cells from both time points were analyzed for lysosomal proteins and astrocyte reactivity markers and the media were screened for inflammatory cytokines. In addition, the overall health of cytoplasmic organelles was investigated by immunocytochemistry and electron microscopy. Our data demonstrate that long-term astrocytes retained frequent Aβ-inclusions that were enclosed within LAMP1-positive organelles and sustained markers associated with reactivity. Furthermore, Aβ-accumulation resulted in endoplasmic reticulum and mitochondrial swelling, increased secretion of the cytokine CCL2/MCP-1 and formation of pathological lipid structures. Taken together, our results provide valuable information of how intracellular Aβ-deposits affect astrocytes, and thereby contribute to the understanding of the role of astrocytes in AD progression.</p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103839"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9947821","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Pleiotropic loci for cannabis use disorder severity in multi-ancestry high-risk populations 多祖先高危人群大麻使用障碍严重程度的多效位点
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103852
Qian Peng , Kirk C. Wilhelmsen , Cindy L. Ehlers
{"title":"Pleiotropic loci for cannabis use disorder severity in multi-ancestry high-risk populations","authors":"Qian Peng ,&nbsp;Kirk C. Wilhelmsen ,&nbsp;Cindy L. Ehlers","doi":"10.1016/j.mcn.2023.103852","DOIUrl":"10.1016/j.mcn.2023.103852","url":null,"abstract":"<div><p><span><span>Cannabis use<span><span> disorder (CUD) is common and has in part a genetic basis. The risk factors underlying its development likely involve multiple genes that are polygenetic and interact with each other and the environment to ultimately lead to the disorder. Co-morbidity and genetic correlations have been identified between CUD and other disorders and traits in select populations primarily of European descent. If two or more traits, such as CUD and another disorder, are affected by the same </span>genetic locus<span>, they are said to be pleiotropic. The present study aimed to identify specific pleiotropic loci for the severity level of CUD in three high-risk population cohorts: American Indians (AI), Mexican Americans (MA), and European Americans (EA). Using a previously developed computational method based on a machine learning technique, we leveraged the entire GWAS catalog and identified 114, 119, and 165 potentially pleiotropic variants for CUD severity in AI, MA, and EA respectively. Ten pleiotropic loci were shared between the cohorts although the exact variants from each cohort differed. While majority of the pleiotropic genes were distinct in each cohort, they converged on numerous enriched biological pathways. The gene ontology<span> terms associated with the pleiotropic genes were predominately related to synaptic functions and neurodevelopment. Notable pathways included Wnt/β-catenin signaling, lipoprotein assembly, response to </span></span></span></span>UV radiation<span>, and components of the complement system. The pleiotropic genes were the most significantly differentially expressed in frontal cortex and coronary artery, up-regulated in adipose tissue, and down-regulated in testis, prostate, and ovary. They were significantly up-regulated in most brain tissues but were down-regulated in the </span></span>cerebellum<span><span><span> and hypothalamus. Our study is the first to attempt a large-scale pleiotropy<span> detection scan for CUD severity. Our findings suggest that the different population cohorts may have distinct genetic factors<span> for CUD, however they share pleiotropic genes from underlying pathways related to Alzheimer's disease, </span></span></span>neuroplasticity, immune response, and reproductive </span>endocrine systems.</span></p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103852"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247496/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9953436","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cytoplasmic TDP-43 accumulation drives changes in C-bouton number and size in a mouse model of sporadic Amyotrophic Lateral Sclerosis 在散发性肌萎缩性侧索硬化症小鼠模型中,胞质TDP-43积累驱动c -钮扣数量和大小的变化
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103840
Anna Normann Bak , Svetlana Djukic , Marion Kadlecova , Thomas Hartig Braunstein , Dennis Bo Jensen , Claire Francesca Meehan
{"title":"Cytoplasmic TDP-43 accumulation drives changes in C-bouton number and size in a mouse model of sporadic Amyotrophic Lateral Sclerosis","authors":"Anna Normann Bak ,&nbsp;Svetlana Djukic ,&nbsp;Marion Kadlecova ,&nbsp;Thomas Hartig Braunstein ,&nbsp;Dennis Bo Jensen ,&nbsp;Claire Francesca Meehan","doi":"10.1016/j.mcn.2023.103840","DOIUrl":"10.1016/j.mcn.2023.103840","url":null,"abstract":"<div><p><span>An altered neuronal excitability of spinal motoneurones has consistently been implicated in </span>Amyotrophic Lateral Sclerosis<span> (ALS) leading to several investigations of synaptic input to these motoneurones. One such input that has repeatedly been shown to be affected is a population of large cholinergic synapses terminating mainly on the soma of the motoneurones referred to as C-boutons. Most research on these synapses during disease progression has used transgenic<span> Superoxide Dismutase 1 (SOD1) mouse models of the disease which have not only produced conflicting findings, but also fail to recapitulate the key pathological feature seen in ALS; cytoplasmic accumulations of TAR DNA-binding protein 43 (TDP-43). Additionally, they fail to distinguish between slow and fast motoneurones, the latter of which have more C-boutons, but are lost earlier in the disease.</span></span></p><p>To circumvent these issues, we quantified the frequency and volume of C-boutons on traced soleus and gastrocnemius motoneurones, representing predominantly slow and fast motor pools respectively. Experiments were performed using the TDP-43ΔNLS mouse model that carries a transgenic construct of TDP-43 devoid of its nuclear localization signal, preventing its nuclear import. This results in the emergence of pathological TDP-43 inclusions in the cytoplasm, modelling the main pathology seen in this disorder, accompanied by a severe and lethal ALS phenotype.</p><p>Our results confirmed changes in both the number and volume of C-boutons with a decrease in number on the more vulnerable, predominantly fast gastrocnemius motoneurones and an increase in number on the less vulnerable, predominantly slow soleus motoneurones. Importantly, these changes were only found in male mice. However, both sexes and motor pools showed a decrease in C-bouton volume. Our experiments confirm that cytoplasmic TDP-43 accumulation is sufficient to drive C-bouton changes.</p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103840"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9574383","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Protein transport from pre- and postsynapse to the nucleus: Mechanisms and functional implications 蛋白从突触前和突触后转运到细胞核:机制和功能意义
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103854
Maria Andres-Alonso , Katarzyna M. Grochowska , Eckart D. Gundelfinger , Anna Karpova , Michael R. Kreutz
{"title":"Protein transport from pre- and postsynapse to the nucleus: Mechanisms and functional implications","authors":"Maria Andres-Alonso ,&nbsp;Katarzyna M. Grochowska ,&nbsp;Eckart D. Gundelfinger ,&nbsp;Anna Karpova ,&nbsp;Michael R. Kreutz","doi":"10.1016/j.mcn.2023.103854","DOIUrl":"10.1016/j.mcn.2023.103854","url":null,"abstract":"<div><p>The extreme length of neuronal processes poses a challenge for synapse-to-nucleus communication. In response to this challenge several different mechanisms have evolved in neurons to couple synaptic activity to the regulation of gene expression. One of these mechanisms concerns the long-distance transport of proteins from pre- and postsynaptic sites to the nucleus. In this review we summarize current evidence on mechanisms of transport and consequences of nuclear import of these proteins for gene transcription. In addition, we discuss how information from pre- and postsynaptic sites might be relayed to the nucleus by this type of long-distance signaling. When applicable, we highlight how long-distance protein transport from synapse-to-nucleus can provide insight into the pathophysiology of disease or reveal new opportunities for therapeutic intervention.</p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103854"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9576316","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Molecular mechanisms of AMPAR reversible stabilization at synapses 突触中AMPAR可逆稳定的分子机制
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103856
Diogo Bessa-Neto , Daniel Choquet
{"title":"Molecular mechanisms of AMPAR reversible stabilization at synapses","authors":"Diogo Bessa-Neto ,&nbsp;Daniel Choquet","doi":"10.1016/j.mcn.2023.103856","DOIUrl":"10.1016/j.mcn.2023.103856","url":null,"abstract":"<div><p><span><span>In the central nervous system<span><span>, glutamatergic synapses play a central role in the regulation of excitatory neuronal transmission. With the membrane-associated </span>guanylate kinase (MAGUK) family of proteins as their structuring scaffold, glutamatergic receptors serve as the powerhouse of glutamatergic synapses. Glutamatergic receptors can be categorized as metabotropic and </span></span>ionotropic receptors. The latter are then categorized into </span><em>N</em>-methyl-<span>d</span><span>-aspartate, kainate receptors<span>, and α-amino-3-hydroxy-5-methyl-isoxazole-propionic acid receptors (AMPARs). Over the past two decades, genetic<span> tagging technology and super-resolution microscopy have been of the utmost importance to unravel how the different receptors are organized at glutamatergic synapses. At the plasma membrane, receptors are highly mobile but show reduced mobility when at synaptic sites. This partial immobilization of receptors at synaptic sites is attributed to the stabilization/anchoring of receptors with the postsynaptic MAGUK<span> proteins and auxiliary proteins, and presynaptic proteins. These partial immobilizations and localization of glutamatergic receptors within the synaptic sites are fundamental for proper basal transmission and synaptic plasticity<span>. Perturbations of the stabilization of glutamatergic receptors are often associated with cognitive deficits. In this review, we describe the proposed mechanisms for synaptic localization and stabilization of AMPARs, the major players of fast excitatory transmission in the central nervous system.</span></span></span></span></span></p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103856"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9576322","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Phenelzine-based probes reveal Secernin-3 is involved in thermal nociception 基于苯苯的探针揭示了丝氨酸-3参与热伤害感受
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103842
Katelyn A. Bustin , Kyosuke Shishikura , Irene Chen , Zongtao Lin , Nate McKnight , Yuxuan Chang , Xie Wang , Jing Jing Li , Eric Arellano , Liming Pei , Paul D. Morton , Ann M. Gregus , Matthew W. Buczynski , Megan L. Matthews
{"title":"Phenelzine-based probes reveal Secernin-3 is involved in thermal nociception","authors":"Katelyn A. Bustin ,&nbsp;Kyosuke Shishikura ,&nbsp;Irene Chen ,&nbsp;Zongtao Lin ,&nbsp;Nate McKnight ,&nbsp;Yuxuan Chang ,&nbsp;Xie Wang ,&nbsp;Jing Jing Li ,&nbsp;Eric Arellano ,&nbsp;Liming Pei ,&nbsp;Paul D. Morton ,&nbsp;Ann M. Gregus ,&nbsp;Matthew W. Buczynski ,&nbsp;Megan L. Matthews","doi":"10.1016/j.mcn.2023.103842","DOIUrl":"10.1016/j.mcn.2023.103842","url":null,"abstract":"<div><p><span><span>Chemical platforms that facilitate both the identification and elucidation of new areas for therapeutic development are necessary but lacking. Activity-based protein profiling (ABPP) leverages active site-directed chemical probes as target discovery tools that resolve activity from expression and immediately marry the targets identified with lead compounds for drug design. However, this approach has traditionally focused on predictable and intrinsic enzyme functionality. Here, we applied our activity-based </span>proteomics discovery platform to map non-encoded and post-translationally acquired enzyme functionalities (</span><em>e.g.</em> cofactors) <em>in vivo</em><span><span> using chemical probes that exploit the nucleophilic hydrazine </span>pharmacophores found in a classic antidepressant drug (</span><em>e.g.</em><span> phenelzine, Nardil®). We show the probes are </span><em>in vivo</em> active and can map proteome-wide tissue-specific target engagement of the drug. In addition to engaging targets (flavoenzymes monoamine oxidase A/B) that are associated with the known therapeutic mechanism as well as several other members of the flavoenzyme family, the probes captured the previously discovered <em>N-</em>terminal glyoxylyl (Glox) group of Secernin-3 (SCRN3) <em>in vivo</em> through a divergent mechanism<em>,</em><span> indicating this functional feature has biochemical activity in the brain. SCRN3 protein is ubiquitously expressed in the brain, yet gene expression is regulated by inflammatory stimuli. In an inflammatory pain mouse model, behavioral assessment of nociception showed </span><em>Scrn3</em><span> male knockout mice selectively exhibited impaired thermal nociceptive sensitivity. Our study provides a guided workflow to entangle molecular (off)targets and pharmacological mechanisms for therapeutic development.</span></p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103842"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10247460/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9595214","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Polygenic influences on the behavioral effects of alcohol withdrawal in a mixed-ancestry population from the collaborative study on the genetics of alcoholism (COGA) 多基因对混合血统人群酒精戒断行为影响的影响——来自酒精遗传合作研究(COGA)
IF 3.5 3区 医学
Molecular and Cellular Neuroscience Pub Date : 2023-06-01 DOI: 10.1016/j.mcn.2023.103851
Chelsie E. Benca-Bachman , Jason Bubier , Rameez A. Syed , Pamela N. Romero Villela , Rohan H.C. Palmer
{"title":"Polygenic influences on the behavioral effects of alcohol withdrawal in a mixed-ancestry population from the collaborative study on the genetics of alcoholism (COGA)","authors":"Chelsie E. Benca-Bachman ,&nbsp;Jason Bubier ,&nbsp;Rameez A. Syed ,&nbsp;Pamela N. Romero Villela ,&nbsp;Rohan H.C. Palmer","doi":"10.1016/j.mcn.2023.103851","DOIUrl":"10.1016/j.mcn.2023.103851","url":null,"abstract":"<div><p><span><span>Alcohol withdrawal (AW) is a feature of alcohol use disorder that may occur in up to half of individuals with chronic, heavy alcohol consumption whenever alcohol use is abruptly stopped or significantly reduced. To date, few genes have been robustly associated with AW; this may be partly due to most studies defining AW as a binary construct despite the multiple symptoms and their range in severity from mild to severe. The current study examined the effects of genome-wide loci on a factor score for AW in high risk and community family samples in the Collaborative Study for the </span>Genetics of Alcoholism (COGA). In addition, we tested whether differentially expressed genes associated with alcohol withdrawal in model organisms are enriched in human genome-wide association study (GWAS) effects. Analyses employed roughly equal numbers of males and females (mean age 35, standard deviation = 15; total </span><em>N</em><span> = 8009) and included individuals from multiple ancestral backgrounds. Genomic data were imputed to the HRC reference panel and underwent strict quality control procedures using Plink2. Analyses controlled for age, sex, and population stratification effects using ancestral principal components. We found support that AW is a polygenic disease (SNP-heritability = 0.08 [95 % CI = 0.01, 0.15; pedigree-based heritability = 0.12 [0.08,0.16]. We identified five single nucleotide variants that met genomewide significance, some of which have previously been associated with alcohol phenotypes. Gene-level analyses suggest a role for COL19A1 in AW; H-MAGMA analyses implicated 12 genes associated with AW. Cross-species enrichment analyses indicated that variation within genes identified in model organism studies explained &lt;1 % of the phenotypic variability in human AW. Notably, the surrounding regulatory regions of model organism genes explained more variance than expected by chance, indicating that these regulatory regions and gene sets may be important for human AW. Lastly, when comparing the overlap in genes identified from the human GWAS and H-MAGMA analyses with the genes identified from the animal studies, there was modest overlap, indicating some convergence between the methods and organisms.</span></p></div>","PeriodicalId":18739,"journal":{"name":"Molecular and Cellular Neuroscience","volume":"125 ","pages":"Article 103851"},"PeriodicalIF":3.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10315187/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10118620","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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