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QSOnic: fast quasar continuum fitting QSOnic：快速类星体连续面拟合
Journal of open source software Pub Date : 2024-05-08 DOI: 10.21105/joss.06373
Naim Göksel Karaçaylı
{"title":"QSOnic: fast quasar continuum fitting","authors":"Naim Göksel Karaçaylı","doi":"10.21105/joss.06373","DOIUrl":"https://doi.org/10.21105/joss.06373","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141001378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CalibrateEmulateSample.jl: Accelerated ParametricUncertainty Quantification CalibrateEmulateSample.jl：加速参数不确定性量化
Journal of open source software Pub Date : 2024-05-06 DOI: 10.21105/joss.06372
Oliver R. A. Dunbar, Melanie Bieli, A. Garbuno-Iñigo, Michael Howland, Andre Nogueira de Souza, Laura A. Mansfield, G. L. Wagner, N. Efrat-Henrici
{"title":"CalibrateEmulateSample.jl: Accelerated Parametric\u0000Uncertainty Quantification","authors":"Oliver R. A. Dunbar, Melanie Bieli, A. Garbuno-Iñigo, Michael Howland, Andre Nogueira de Souza, Laura A. Mansfield, G. L. Wagner, N. Efrat-Henrici","doi":"10.21105/joss.06372","DOIUrl":"https://doi.org/10.21105/joss.06372","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141008795","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Arabica: A Python package for exploratory analysis oftext data 阿拉比卡用于文本数据探索性分析的 Python 软件包
Journal of open source software Pub Date : 2024-05-05 DOI: 10.21105/joss.06186
Petr Koráb, J. Poměnková
{"title":"Arabica: A Python package for exploratory analysis of\u0000text data","authors":"Petr Koráb, J. Poměnková","doi":"10.21105/joss.06186","DOIUrl":"https://doi.org/10.21105/joss.06186","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141011737","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Thresholdmann: A Web tool for interactively creatingadaptive thresholds to segment MRI data. Thresholdmann：用于交互式创建适应性阈值以分割磁共振成像数据的网络工具。
Journal of open source software Pub Date : 2024-05-03 DOI: 10.21105/joss.06336
K. Heuer, N. Traut, Roberto Toro
{"title":"Thresholdmann: A Web tool for interactively creating\u0000adaptive thresholds to segment MRI data.","authors":"K. Heuer, N. Traut, Roberto Toro","doi":"10.21105/joss.06336","DOIUrl":"https://doi.org/10.21105/joss.06336","url":null,"abstract":"Brain extraction and segmentation are the first step for most neuroimaging analyses. Automatic methods work well in adult human brains, but produce unreliable results in non-human data, due to muscle tissue, skull, and luminosity gradients. Thresholdmann (https://neuroanatomy. github.io/thresholdmann) is an open source Web tool for the interactive application of space-varying thresholds to Nifti volumes. No download or installation are required and all processing is done on the user’s computer. Nifti volumes are dragged and dropped onto the Web app and become available for visual exploration in a stereotaxic viewer. A space-varying threshold is then created by setting control points, each with their own local threshold. Each point can be repositioned or removed, and each local threshold can be adjusted in real time using sliders or entering their values numerically. The threshold direction can be switched to allow segmentation of the structure of interest in different imaging modalities, such as T1 and T2 weighted contrasts. The opacity of the mask and the brightness and contrast of the MRI image can be adjusted via sliders. A 3D model of the thresholded mask can be computed to inspect the result in an interactive 3D render. Finally, the thresholded mask, the space varying threshold and the list of control points can be saved for later use in scripted workflows, able to reproduce the thresholded volume from the original data.","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141016318","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
GIRFReco.jl: An Open-Source Pipeline for SpiralMagnetic Resonance Image (MRI) Reconstruction in Julia GIRFReco.jl：用 Julia 进行螺旋磁共振图像 (MRI) 重建的开源管道
Journal of open source software Pub Date : 2024-05-02 DOI: 10.21105/joss.05877
Alexander Jaffray, Zhe Wu, S. Vannesjo, K. Uludağ, Lars Kasper
{"title":"GIRFReco.jl: An Open-Source Pipeline for Spiral\u0000Magnetic Resonance Image (MRI) Reconstruction in Julia","authors":"Alexander Jaffray, Zhe Wu, S. Vannesjo, K. Uludağ, Lars Kasper","doi":"10.21105/joss.05877","DOIUrl":"https://doi.org/10.21105/joss.05877","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141021178","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
GrainLearning: A Bayesian uncertainty quantificationtoolbox for discrete and continuum numerical models of granularmaterials GrainLearning：用于颗粒材料离散和连续数值模型的贝叶斯不确定性量化工具箱
Journal of open source software Pub Date : 2024-05-02 DOI: 10.21105/joss.06338
Hongyang Cheng, Luisa Orozco, Retief Lubbe, Aron Jansen, Philipp Hartmann, K. Thoeni
{"title":"GrainLearning: A Bayesian uncertainty quantification\u0000toolbox for discrete and continuum numerical models of granular\u0000materials","authors":"Hongyang Cheng, Luisa Orozco, Retief Lubbe, Aron Jansen, Philipp Hartmann, K. Thoeni","doi":"10.21105/joss.06338","DOIUrl":"https://doi.org/10.21105/joss.06338","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141017661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cellpy – an open-source library for processing andanalysis of battery testing data Cellpy - 用于处理和分析电池测试数据的开源库
Journal of open source software Pub Date : 2024-05-02 DOI: 10.21105/joss.06236
Julia Wind, Asbjørn Ulvestad, Muhammad Abdelhamid, J. P. Mæhlen
{"title":"Cellpy – an open-source library for processing and\u0000analysis of battery testing data","authors":"Julia Wind, Asbjørn Ulvestad, Muhammad Abdelhamid, J. P. Mæhlen","doi":"10.21105/joss.06236","DOIUrl":"https://doi.org/10.21105/joss.06236","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141021356","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ETHOS.PeNALPS: A Tool for the Load Profile Simulationof Industrial Processes Based on a Material Flow Simulation ETHOS.PeNALPS：基于物料流模拟的工业流程负荷曲线模拟工具
Journal of open source software Pub Date : 2024-05-02 DOI: 10.21105/joss.06358
Julian Belina, N. Pflugradt, Detlef Stolten
{"title":"ETHOS.PeNALPS: A Tool for the Load Profile Simulation\u0000of Industrial Processes Based on a Material Flow Simulation","authors":"Julian Belina, N. Pflugradt, Detlef Stolten","doi":"10.21105/joss.06358","DOIUrl":"https://doi.org/10.21105/joss.06358","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141021853","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The plebeian Graph Library: A WebGL based networkvisualisation and diagnostics package 恳求图库基于 WebGL 的网络可视化和诊断软件包
Journal of open source software Pub Date : 2024-04-25 DOI: 10.21105/joss.05887
Indrajeet Haldar
{"title":"The plebeian Graph Library: A WebGL based network\u0000visualisation and diagnostics package","authors":"Indrajeet Haldar","doi":"10.21105/joss.05887","DOIUrl":"https://doi.org/10.21105/joss.05887","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140653687","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
statemodify: a Python framework to facilitateaccessible exploratory modeling for discovering droughtvulnerabilities statemodify：一个 Python 框架，为发现干旱脆弱性的可访问探索性建模提供便利
Journal of open source software Pub Date : 2024-04-25 DOI: 10.21105/joss.06325
Rohini S. Gupta, Chris R. Vernon, Travis B. Thurber, D. Gold, Zachary M. Hirsch, A. Hadjimichael, P. Reed
{"title":"statemodify: a Python framework to facilitate\u0000accessible exploratory modeling for discovering drought\u0000vulnerabilities","authors":"Rohini S. Gupta, Chris R. Vernon, Travis B. Thurber, D. Gold, Zachary M. Hirsch, A. Hadjimichael, P. Reed","doi":"10.21105/joss.06325","DOIUrl":"https://doi.org/10.21105/joss.06325","url":null,"abstract":"","PeriodicalId":16635,"journal":{"name":"Journal of open source software","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140658888","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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