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Annual International Conference on Research in Computational Molecular Biology最新文献

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Towards Recovering Allele-Specific Cancer Genome Graphs 恢复等位基因特异性癌症基因组图谱
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2017-05-03 DOI: 10.1007/978-3-319-56970-3_14
Ashok Rajaraman, Jian Ma
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引用次数: 1
EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices epr字典:在单向和双向FM索引中用于常量时间搜索的实用和快速的数据结构
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-08-08 DOI: 10.1007/978-3-319-56970-3_12
Christopher Pockrandt, M. Ehrhardt, K. Reinert
{"title":"EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices","authors":"Christopher Pockrandt, M. Ehrhardt, K. Reinert","doi":"10.1007/978-3-319-56970-3_12","DOIUrl":"https://doi.org/10.1007/978-3-319-56970-3_12","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2016-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116506635","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
The Second Decade of the International Conference on Research in Computational Molecular Biology (RECOMB) 计算分子生物学国际研究会议第二个十年
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-04-17 DOI: 10.1007/978-3-319-31957-5_1
F. Hormozdiari, F. Hormozdiari, Carl Kingsford, P. Medvedev, Fabio Vandin
{"title":"The Second Decade of the International Conference on Research in Computational Molecular Biology (RECOMB)","authors":"F. Hormozdiari, F. Hormozdiari, Carl Kingsford, P. Medvedev, Fabio Vandin","doi":"10.1007/978-3-319-31957-5_1","DOIUrl":"https://doi.org/10.1007/978-3-319-31957-5_1","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"27 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2016-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125269924","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
pathTiMEx: Joint Inference of Mutually Exclusive Cancer Pathways and Their Dependencies in Tumor Progression pathTiMEx:相互排斥的肿瘤通路及其在肿瘤进展中的依赖性的联合推断
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-04-17 DOI: 10.1007/978-3-319-31957-5_5
Simona Cristea, Jack Kuipers, N. Beerenwinkel
{"title":"pathTiMEx: Joint Inference of Mutually Exclusive Cancer Pathways and Their Dependencies in Tumor Progression","authors":"Simona Cristea, Jack Kuipers, N. Beerenwinkel","doi":"10.1007/978-3-319-31957-5_5","DOIUrl":"https://doi.org/10.1007/978-3-319-31957-5_5","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"30 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2016-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126804500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Clonality Inference from Single Tumor Samples Using Low Coverage Sequence Data 利用低覆盖率序列数据推断单个肿瘤样本的克隆性
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-04-17 DOI: 10.1007/978-3-319-31957-5_6
Nilgun Donmez, S. Malikić, A. Wyatt, M. Gleave, C. Collins, S. C. Sahinalp
{"title":"Clonality Inference from Single Tumor Samples Using Low Coverage Sequence Data","authors":"Nilgun Donmez, S. Malikić, A. Wyatt, M. Gleave, C. Collins, S. C. Sahinalp","doi":"10.1007/978-3-319-31957-5_6","DOIUrl":"https://doi.org/10.1007/978-3-319-31957-5_6","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"16 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2016-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134113136","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Flexible Modelling of Genetic Effects on Function-Valued Traits 功能价值性状遗传效应的灵活建模
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-04-17 DOI: 10.1007/978-3-319-31957-5_7
Nicoló Fusi, J. Listgarten
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引用次数: 3
Improving Bloom Filter Performance on Sequence Data Using k -mer Bloom Filters 利用k -mer布隆滤波器改进序列数据的布隆滤波性能
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-04-17 DOI: 10.1007/978-3-319-31957-5_10
David Pellow, Darya Filippova, Carl Kingsford
{"title":"Improving Bloom Filter Performance on Sequence Data Using k -mer Bloom Filters","authors":"David Pellow, Darya Filippova, Carl Kingsford","doi":"10.1007/978-3-319-31957-5_10","DOIUrl":"https://doi.org/10.1007/978-3-319-31957-5_10","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"164 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2016-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116594797","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Fast Phylogenetic Biodiversity Computations Under a Non-uniform Random Distribution 非均匀随机分布下系统发育生物多样性的快速计算
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2016-04-17 DOI: 10.1007/978-3-319-31957-5_16
Constantinos Tsirogiannis, B. Sandel
{"title":"Fast Phylogenetic Biodiversity Computations Under a Non-uniform Random Distribution","authors":"Constantinos Tsirogiannis, B. Sandel","doi":"10.1007/978-3-319-31957-5_16","DOIUrl":"https://doi.org/10.1007/978-3-319-31957-5_16","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"66 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2016-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121474458","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence 彗星(约束多态能量的树搜索优化):一种可证明的有效的序列结合亲和力和特异性优化算法
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2015-04-12 DOI: 10.1007/978-3-319-16706-0_14
Mark A Hallen, B. Donald
{"title":"Comets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence","authors":"Mark A Hallen, B. Donald","doi":"10.1007/978-3-319-16706-0_14","DOIUrl":"https://doi.org/10.1007/978-3-319-16706-0_14","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"47 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114513285","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Exploration of Designability of Proteins Using Graph Features of Contact Maps: Beyond Lattice Models 利用接触图的图形特征探索蛋白质的可设计性:超越格子模型
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2015-04-12 DOI: 10.1007/978-3-319-16706-0_18
Sumudu P. Leelananda, R. Jernigan, A. Kloczkowski
{"title":"Exploration of Designability of Proteins Using Graph Features of Contact Maps: Beyond Lattice Models","authors":"Sumudu P. Leelananda, R. Jernigan, A. Kloczkowski","doi":"10.1007/978-3-319-16706-0_18","DOIUrl":"https://doi.org/10.1007/978-3-319-16706-0_18","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128808510","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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