{"title":"A Guided Network Propagation Approach to Identify Disease Genes that Combines Prior and New Information","authors":"B. Hristov, B. Chazelle, Mona Singh","doi":"10.1007/978-3-030-45257-5_25","DOIUrl":"https://doi.org/10.1007/978-3-030-45257-5_25","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"25 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128940383","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Improving Imputation Accuracy by Inferring Causal Variants in Genetic Studies","authors":"Yue Wu, F. Hormozdiari, J. W. Joo, E. Eskin","doi":"10.1007/978-3-319-56970-3_19","DOIUrl":"https://doi.org/10.1007/978-3-319-56970-3_19","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129438195","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ye Wu, Ruibang Luo, Henry C. M. Leung, H. Ting, T. Lam
{"title":"RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature","authors":"Ye Wu, Ruibang Luo, Henry C. M. Leung, H. Ting, T. Lam","doi":"10.1007/978-3-030-17083-7_17","DOIUrl":"https://doi.org/10.1007/978-3-030-17083-7_17","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"55 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126779264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Disentangled Representations of Cellular Identity","authors":"Ziheng Wang, G. Yeo, R. Sherwood, D. Gifford","doi":"10.1007/978-3-030-17083-7_16","DOIUrl":"https://doi.org/10.1007/978-3-030-17083-7_16","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"7 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132130455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lodewijk Brand, Xue Yang, Kai Liu, Saad El Beleidy, Hua Wang, Hao Zhang
{"title":"Learning Robust Multi-label Sample Specific Distances for Identifying HIV-1 Drug Resistance","authors":"Lodewijk Brand, Xue Yang, Kai Liu, Saad El Beleidy, Hua Wang, Hao Zhang","doi":"10.1007/978-3-030-17083-7_4","DOIUrl":"https://doi.org/10.1007/978-3-030-17083-7_4","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"56 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128012362","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
J. D. Jou, Graham T. Holt, Anna U. Lowegard, B. Donald
{"title":"Minimization-Aware Recursive K^* K ∗ ( MARK^* MARK ∗ ): A Novel, Provable Algorithm that Accelerates Ensemble-Based Protein Design and Provably Approximates the Energy Landscape","authors":"J. D. Jou, Graham T. Holt, Anna U. Lowegard, B. Donald","doi":"10.1007/978-3-030-17083-7_7","DOIUrl":"https://doi.org/10.1007/978-3-030-17083-7_7","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"100 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124054779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Identifying Clinical Terms in Free-Text Notes Using Ontology-Guided Machine Learning","authors":"Aryan Arbabi, D. Adams, S. Fidler, M. Brudno","doi":"10.1007/978-3-030-17083-7_2","DOIUrl":"https://doi.org/10.1007/978-3-030-17083-7_2","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"18 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122139348","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shounak Chakraborty, S. Canzar, T. Marschall, Marcel H. Schulz
{"title":"Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data","authors":"Shounak Chakraborty, S. Canzar, T. Marschall, Marcel H. Schulz","doi":"10.1007/978-3-319-89929-9_2","DOIUrl":"https://doi.org/10.1007/978-3-319-89929-9_2","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"405 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123382695","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sharma V. Thankachan, Chaitanya Aluru, Sriram P. Chockalingam, S. Aluru
{"title":"Algorithmic Framework for Approximate Matching Under Bounded Edits with Applications to Sequence Analysis","authors":"Sharma V. Thankachan, Chaitanya Aluru, Sriram P. Chockalingam, S. Aluru","doi":"10.1007/978-3-319-89929-9_14","DOIUrl":"https://doi.org/10.1007/978-3-319-89929-9_14","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"71 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121172308","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cyril Galitzine, P. M. J. Beltran, I. Cristea, O. Vitek
{"title":"Statistical Inference of Peroxisome Dynamics","authors":"Cyril Galitzine, P. M. J. Beltran, I. Cristea, O. Vitek","doi":"10.1007/978-3-319-89929-9_4","DOIUrl":"https://doi.org/10.1007/978-3-319-89929-9_4","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"34 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122743479","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}