Clinical & Translational Immunology最新文献

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Mass cytometry analysis reveals altered immune profiles in patients with coronary artery disease 质谱分析显示冠状动脉疾病患者的免疫谱发生了改变。
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-11-02 DOI: 10.1002/cti2.1462
Katharine A Kott, Adam S Chan, Stephen T Vernon, Thomas Hansen, Taiyun Kim, Macha de Dreu, Bavani Gunasegaran, Andrew J Murphy, Ellis Patrick, Peter J Psaltis, Stuart M Grieve, Jean Y Yang, Barbara Fazekas de St Groth, Helen M McGuire, Gemma A Figtree
{"title":"Mass cytometry analysis reveals altered immune profiles in patients with coronary artery disease","authors":"Katharine A Kott,&nbsp;Adam S Chan,&nbsp;Stephen T Vernon,&nbsp;Thomas Hansen,&nbsp;Taiyun Kim,&nbsp;Macha de Dreu,&nbsp;Bavani Gunasegaran,&nbsp;Andrew J Murphy,&nbsp;Ellis Patrick,&nbsp;Peter J Psaltis,&nbsp;Stuart M Grieve,&nbsp;Jean Y Yang,&nbsp;Barbara Fazekas de St Groth,&nbsp;Helen M McGuire,&nbsp;Gemma A Figtree","doi":"10.1002/cti2.1462","DOIUrl":"10.1002/cti2.1462","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objective</h3>\u0000 \u0000 <p>The importance of inflammation in atherosclerosis is well accepted, but the role of the adaptive immune system is not yet fully understood. To further explore this, we assessed the circulating immune cell profile of patients with coronary artery disease (CAD) to identify discriminatory features by mass cytometry.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Mass cytometry was performed on patient samples from the BioHEART-CT study, gated to detect 82 distinct cell subsets. CT coronary angiograms were analysed to categorise patients as having CAD (CAD<sup>+</sup>) or having normal coronary arteries (CAD<sup>−</sup>).</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The discovery cohort included 117 patients (mean age 61 ± 12 years, 49% female); 79 patients (68%) were CAD<sup>+</sup>. Mass cytometry identified changes in 15 T-cell subsets, with higher numbers of proliferating, highly differentiated and cytotoxic cells and decreases in naïve T cells. Five T-regulatory subsets were related to an age and gender-independent increase in the odds of CAD incidence when expressing CCR2 (OR 1.12), CCR4 (OR 1.08), CD38 and CD45RO (OR 1.13), HLA-DR (OR 1.06) and Ki67 (OR 1.22). Markers of proliferation and differentiation were also increased within B cells, while plasmacytoid dendritic cells were decreased. This combination of changes was assessed using SVM models in discovery and validation cohorts (area under the curve = 0.74 for both), confirming the robust nature of the immune signature detected.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>We identified differences within immune subpopulations of CAD<sup>+</sup> patients which are indicative of a systemic immune response to coronary atherosclerosis. This immune signature needs further study <i>via</i> incorporation into risk scoring tools for the precision diagnosis of CAD.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 11","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71475943","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Early CRP kinetics to predict long-term efficacy of first-line immune-checkpoint inhibition combination therapies in metastatic renal cell carcinoma: an updated multicentre real-world experience applying different CRP kinetics definitions 早期CRP动力学预测转移性肾癌一线免疫检查点抑制联合治疗的长期疗效:应用不同CRP动力学定义的最新多中心真实世界经验
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-10-25 DOI: 10.1002/cti2.1471
Benedikt Hoeh, Cristina Cano Garcia, Severine Banek, Niklas Klümper, Alexander Cox, Jörg Ellinger, Philipp Schmucker, Oliver Hahn, Angelika Mattigk, Friedemann Zengerling, Philippe Becker, Kati Erdmann, Bjoern Thorben Buerk, Luka Flegar, Johannes Huber, Charis Kalogirou, Philip Zeuschner
{"title":"Early CRP kinetics to predict long-term efficacy of first-line immune-checkpoint inhibition combination therapies in metastatic renal cell carcinoma: an updated multicentre real-world experience applying different CRP kinetics definitions","authors":"Benedikt Hoeh,&nbsp;Cristina Cano Garcia,&nbsp;Severine Banek,&nbsp;Niklas Klümper,&nbsp;Alexander Cox,&nbsp;Jörg Ellinger,&nbsp;Philipp Schmucker,&nbsp;Oliver Hahn,&nbsp;Angelika Mattigk,&nbsp;Friedemann Zengerling,&nbsp;Philippe Becker,&nbsp;Kati Erdmann,&nbsp;Bjoern Thorben Buerk,&nbsp;Luka Flegar,&nbsp;Johannes Huber,&nbsp;Charis Kalogirou,&nbsp;Philip Zeuschner","doi":"10.1002/cti2.1471","DOIUrl":"10.1002/cti2.1471","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>Although biomarkers predicting therapy response in first-line metastatic renal carcinoma (mRCC) therapy remain to be defined, C-reactive protein (CRP) kinetics have recently been associated with immunotherapy (IO) response. Here, we aimed to assess the predictive and prognostic power of two contemporary CRP kinetics definitions in a large, real-world first-line mRCC cohort.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Metastatic renal carcinoma patients treated with IO-based first-line therapy within 5 years were retrospectively included in this multicentre study. According to Fukuda <i>et al.</i>, patients were defined as ‘CRP flare-responder’, ‘CRP responder’ and ‘non-CRP responder’; according to Ishihara <i>et al.</i>, patients were defined as ‘normal’, ‘normalised’ and ‘non-normalised’ based on their early CRP kinetics. Patient and tumor characteristics were compared, and treatment outcome was measured by overall (OS) and progression-free survival (PFS), including multivariable Cox regression analyses.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Out of 316 mRCC patients, 227 (72%) were assigned to CRP groups according to Fukuda. Both CRP flare- (HR [Hazard ratio]: 0.59) and CRP responders (HR: 0.52) had a longer PFS, but not OS, than non-CRP responders. According to Ishihara, 276 (87%) patients were assigned to the respective groups, and both normal and normalised patients had a significantly longer PFS and OS, compared with non-normalised group.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>Different early CRP kinetics may predict therapy response in first-line mRCC therapy in a large real-world cohort. However, further research regarding the optimal timing and frequency of measurement is needed.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 10","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10600333/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71409921","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting BMI-1 to deplete antibody-secreting cells in autoimmunity 在自身免疫中靶向BMI-1消耗抗体分泌细胞
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-10-04 DOI: 10.1002/cti2.1470
Jack Polmear, Lauren Hailes, Moshe Olshansky, Maureen Rischmueller, Elan L'Estrange-Stranieri, Anne L Fletcher, Margaret L Hibbs, Vanessa L Bryant, Kim L Good-Jacobson
{"title":"Targeting BMI-1 to deplete antibody-secreting cells in autoimmunity","authors":"Jack Polmear,&nbsp;Lauren Hailes,&nbsp;Moshe Olshansky,&nbsp;Maureen Rischmueller,&nbsp;Elan L'Estrange-Stranieri,&nbsp;Anne L Fletcher,&nbsp;Margaret L Hibbs,&nbsp;Vanessa L Bryant,&nbsp;Kim L Good-Jacobson","doi":"10.1002/cti2.1470","DOIUrl":"10.1002/cti2.1470","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>B cells drive the production of autoreactive antibody-secreting cells (ASCs) in autoimmune diseases such as Systemic Lupus Erythematosus (SLE) and Sjögren's syndrome, causing long-term organ damage. Current treatments for antibody-mediated autoimmune diseases target B cells or broadly suppress the immune system. However, pre-existing long-lived ASCs are often refractory to treatment, leaving a reservoir of autoreactive cells that continue to produce antibodies. Therefore, the development of novel treatment methods targeting ASCs is vital to improve patient outcomes. Our objective was to test whether targeting the epigenetic regulator BMI-1 could deplete ASCs in autoimmune conditions <i>in vivo</i> and <i>in vitro</i>.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Use of a BMI-1 inhibitor in both mouse and human autoimmune settings was investigated. <i>Lyn</i><sup><i>−/−</i></sup> mice, a model of SLE, were treated with the BMI-1 small molecule inhibitor PTC-028, before assessment of ASCs, serum antibody and immune complexes. To examine human ASC survival, a novel human fibroblast-based assay was established, and the impact of PTC-028 on ASCs derived from Sjögren's syndrome patients was evaluated.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>BMI-1 inhibition significantly decreased splenic and bone marrow ASCs in <i>Lyn</i><sup><i>−/−</i></sup> mice. The decline in ASCs was linked to aberrant cell cycle gene expression and led to a significant decrease in serum IgG3, immune complexes and anti-DNA IgG. PTC-028 was also efficacious in reducing <i>ex vivo</i> plasma cell survival from both Sjögren's syndrome patients and age-matched healthy donors.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>These data provide evidence that inhibiting BMI-1 can deplete ASC in a variety of contexts and thus BMI-1 is a viable therapeutic target for antibody-mediated autoimmune diseases.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 10","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10550498/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41093720","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dopaminergic regulation of inflammation and immunity in Parkinson's disease: friend or foe? 帕金森病炎症和免疫的多巴胺能调节:朋友还是敌人?
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-09-29 DOI: 10.1002/cti2.1469
Alessia Furgiuele, Frederico C Pereira, Stefano Martini, Franca Marino, Marco Cosentino
{"title":"Dopaminergic regulation of inflammation and immunity in Parkinson's disease: friend or foe?","authors":"Alessia Furgiuele,&nbsp;Frederico C Pereira,&nbsp;Stefano Martini,&nbsp;Franca Marino,&nbsp;Marco Cosentino","doi":"10.1002/cti2.1469","DOIUrl":"https://doi.org/10.1002/cti2.1469","url":null,"abstract":"<p>Parkinson's disease (PD) is a neurodegenerative disease affecting 7–10 million people worldwide. Currently, there is no treatment available to prevent or delay PD progression, partially due to the limited understanding of the pathological events which lead to the death of dopaminergic neurons in the <i>substantia nigra</i> in the brain, which is known to be the cause of PD symptoms. The current available treatments aim at compensating dopamine (DA) deficiency in the brain using its precursor levodopa, dopaminergic agonists and some indirect dopaminergic agents. The immune system is emerging as a critical player in PD. Therefore, immune-based approaches have recently been proposed to be used as potential antiparkinsonian agents. It has been well-known that dopaminergic pathways play a significant role in regulating immune responses in the brain. Although dopaminergic agents are the primary antiparkinsonian treatments, their immune regulatory effect has yet to be fully understood. The present review summarises the current available evidence of the immune regulatory effects of DA and its mimics and discusses dopaminergic agents as antiparkinsonian drugs. Based on the current understanding of their involvement in the regulation of neuroinflammation in PD, we propose that targeting immune pathways involved in PD pathology could offer a better treatment outcome for PD patients.</p>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 10","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cti2.1469","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41084335","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Autoimmune uveitis in Behçet's disease and Vogt-Koyanagi-Harada disease differ in tissue immune infiltration and T cell clonality behet病和Vogt-Koyanagi-Harada病的自身免疫性葡萄膜炎在组织免疫浸润和T细胞克隆方面存在差异
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-09-15 DOI: 10.1002/cti2.1461
Hao Kang, Hongjian Sun, Yang Yang, Zewen K Tuong, Minglei Shu, Yunbo Wei, Yu Zhang, Di Yu, Yong Tao
{"title":"Autoimmune uveitis in Behçet's disease and Vogt-Koyanagi-Harada disease differ in tissue immune infiltration and T cell clonality","authors":"Hao Kang,&nbsp;Hongjian Sun,&nbsp;Yang Yang,&nbsp;Zewen K Tuong,&nbsp;Minglei Shu,&nbsp;Yunbo Wei,&nbsp;Yu Zhang,&nbsp;Di Yu,&nbsp;Yong Tao","doi":"10.1002/cti2.1461","DOIUrl":"10.1002/cti2.1461","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>Non-infectious uveitis is often secondary to systemic autoimmune diseases, with Behçet's disease (BD) and Vogt-Koyanagi-Harada disease (VKHD) as the two most common causes. Uveitis in BD and VKHD can show similar clinical manifestations, but the underlying immunopathogenesis remains unclear.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>To understand immune landscapes in inflammatory eye tissues, we performed single-cell RNA paired with T cell receptor (TCR) sequencing of immune cell infiltrates in aqueous humour from six patients with BD (<i>N</i> = 3) and VKHD (<i>N</i> = 3) uveitis patients.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Although T cells strongly infiltrated in both types of autoimmune uveitis, myeloid cells only significantly presented in BD uveitis but not in VKHD uveitis. Conversely, VKHD uveitis but not BD uveitis showed an overwhelming dominance by CD4<sup>+</sup> T cells (&gt; 80%) within the T cell population due to expansion of CD4<sup>+</sup> T cell clusters with effector memory (Tem) phenotypes. Correspondingly, VKHD uveitis demonstrated a selective expansion of CD4<sup>+</sup> T cell clones which were enriched in pro-inflammatory Granzyme H<sup>+</sup> CD4<sup>+</sup> Tem cluster and showed TCR and Th1 pathway activation. In contrast, BD uveitis showed a preferential expansion of CD8<sup>+</sup> T cell clones in pro-inflammatory Granzyme H<sup>+</sup> CD8<sup>+</sup> Tem cluster, and pathway activation for cytoskeleton remodelling, cellular adhesion and cytotoxicity.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>Single-cell analyses of ocular tissues reveal distinct landscapes of immune cell infiltration and T-cell clonal expansions between VKHD and BD uveitis. Preferential involvements of pro-inflammatory CD4<sup>+</sup> Th1 cells in VKHD and cytotoxic CD8<sup>+</sup> T cells in BD suggest a difference in disease immunopathogenesis and can guide precision disease management.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 9","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10503407/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10308461","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Individualised adjuvant immunotherapy with neoantigen-reactive T cells for gastric signet-ring cell carcinoma 新抗原反应性T细胞个体化辅助免疫治疗胃印戒细胞癌
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-09-11 DOI: 10.1002/cti2.1467
Naiqing Ding, Qin Liu, Juan Du, Jie Shao, Yang Yang, Ju Yang, Fangjun Chen, Lixia Yu, Baorui Liu, Jia Wei
{"title":"Individualised adjuvant immunotherapy with neoantigen-reactive T cells for gastric signet-ring cell carcinoma","authors":"Naiqing Ding,&nbsp;Qin Liu,&nbsp;Juan Du,&nbsp;Jie Shao,&nbsp;Yang Yang,&nbsp;Ju Yang,&nbsp;Fangjun Chen,&nbsp;Lixia Yu,&nbsp;Baorui Liu,&nbsp;Jia Wei","doi":"10.1002/cti2.1467","DOIUrl":"10.1002/cti2.1467","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>The signet-ring cell carcinoma (SRCC) of the stomach is highly invasive. Patients with stage III gastric SRCC usually experience tumor recurrence within 2 years after radical surgery. Unfortunately, there is no effective treatment to postpone recurrence following adjuvant chemotherapy. Our study aimed to explore the safety and efficacy of neoantigen-reactive T lymphocytes (NRTs) in patients with stage III gastric SRCC.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>The study included 20 patients with stage III gastric SRCC who received radical surgery and adjuvant chemotherapy. Following the adjuvant chemotherapy, they underwent treatment with a range of one to four cycles of personalised neoantigen-reactive T cells. The primary endpoint was the median progression-free survival (mDFS). The secondary endpoint was safety and immune responses. The median duration of follow-up was 41 months (95% CI: 39–42.9 months).</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Our results showed that patients who received adjuvant neoantigen-reactive T-cell immunotherapy demonstrated a propensity towards prolonged disease-free survival (DFS) and overall survival (OS) in comparison to previous studies. The 2-year DFS and OS rates reached 73.7% and 95%, respectively, whereas the 5-year DFS and OS rates were 44% and 69%. The median DFS was 41 months (95% CI: 28.9–53.1 months) and the median OS was not reached. In addition, there was a significant increase in serum concentrations of IL-2, IL-4, IL-6, IL-10, TNF-α and IFN-γ after cell immunotherapy. The adverse reactions were mild.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>In conclusion, adjuvant immunotherapy with NRTs showed promising efficacy alongside a manageable safety profile.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 9","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/15/65/CTI2-12-e1467.PMC10494288.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10229893","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design, optimisation and standardisation of a high-dimensional spectral flow cytometry workflow assessing T-cell immunophenotype in patients with melanoma 设计、优化和标准化评估黑色素瘤患者t细胞免疫表型的高维光谱流式细胞术工作流程
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-09-07 DOI: 10.1002/cti2.1466
Jack M Edwards, Miles C Andrews, Hayley Burridge, Robin Smith, Carole Owens, Mark Edinger, Katherine Pilkington, Juliette Desfrancois, Mark Shackleton, Sashendra Senthi, Menno C van Zelm
{"title":"Design, optimisation and standardisation of a high-dimensional spectral flow cytometry workflow assessing T-cell immunophenotype in patients with melanoma","authors":"Jack M Edwards,&nbsp;Miles C Andrews,&nbsp;Hayley Burridge,&nbsp;Robin Smith,&nbsp;Carole Owens,&nbsp;Mark Edinger,&nbsp;Katherine Pilkington,&nbsp;Juliette Desfrancois,&nbsp;Mark Shackleton,&nbsp;Sashendra Senthi,&nbsp;Menno C van Zelm","doi":"10.1002/cti2.1466","DOIUrl":"https://doi.org/10.1002/cti2.1466","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>Despite the success of immune checkpoint blockade, most metastatic melanoma patients fail to respond to therapy or experience severe toxicity. Assessment of biomarkers and immunophenotypes before or early into treatment will help to understand favourable responses and improve therapeutic outcomes.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We present a high-dimensional approach for blood T-cell profiling using three multi-parameter cytometry panels: (1) a TruCount panel for absolute cell counts, (2) a 27-colour spectral panel assessing T-cell markers and (3) a 20-colour spectral panel evaluating intracellular cytokine expression. Pre-treatment blood mononuclear cells from patients and healthy controls were cryopreserved before staining across 11 batches. Batch effects were tracked using a single-donor control and the suitability of normalisation was assessed. The data were analysed using manual gating and high-dimensional strategies.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Batch-to-batch variation was minimal, as demonstrated by the dimensionality reduction of batch-control samples, and normalisation did not improve manual or high-dimensional analysis. Application of the workflow demonstrated the capacity of the panels and showed that patients had fewer lymphocytes than controls (<i>P</i> = 0.0027), due to lower naive CD4<sup>+</sup> (<i>P</i> = 0.015) and CD8<sup>+</sup> (<i>P</i> = 0.011) T cells and follicular helper T cells (<i>P</i> = 0.00076). Patients showed trends for higher proportions of Ki67 and IL-2-expressing cells within CD4<sup>+</sup> and CD8<sup>+</sup> memory subsets, and increased CD57 and EOMES expression within TCRγδ<sup>+</sup> T cells.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>Our optimised high-parameter spectral cytometry approach provided in-depth profiling of blood T cells and found differences in patient immunophenotype at baseline. The robustness of our workflow, as demonstrated by minimal batch effects, makes this approach highly suitable for the longitudinal evaluation of immunotherapy effects.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 9","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cti2.1466","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6303019","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genomic and tumour microenvironmental biomarkers of immune checkpoint inhibitor response in advanced Taiwanese melanoma 台湾晚期黑色素瘤中免疫检查点抑制剂反应的基因组和肿瘤微环境生物标志物
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-08-29 DOI: 10.1002/cti2.1465
John Wen-Cheng Chang, Chien-Jung Huang, Wen-Kuan Huang, Yu-Chao Wang, Jia-Juan Hsieh, Yao-Yu Chang, Yen-Lin Huang, Chia-Ling Wu, Yeh-Han Wang, Shu-Jen Chen, Kien Thiam Tan, Chiao-Ping Chen, Chiao-En Wu
{"title":"Genomic and tumour microenvironmental biomarkers of immune checkpoint inhibitor response in advanced Taiwanese melanoma","authors":"John Wen-Cheng Chang,&nbsp;Chien-Jung Huang,&nbsp;Wen-Kuan Huang,&nbsp;Yu-Chao Wang,&nbsp;Jia-Juan Hsieh,&nbsp;Yao-Yu Chang,&nbsp;Yen-Lin Huang,&nbsp;Chia-Ling Wu,&nbsp;Yeh-Han Wang,&nbsp;Shu-Jen Chen,&nbsp;Kien Thiam Tan,&nbsp;Chiao-Ping Chen,&nbsp;Chiao-En Wu","doi":"10.1002/cti2.1465","DOIUrl":"10.1002/cti2.1465","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objective</h3>\u0000 \u0000 <p>Genomic biomarkers predicting immune checkpoint inhibitor (ICI) treatment outcomes for Asian metastatic melanoma have been rarely reported. This study presents data on next-generation sequencing (NGS) and tumour microenvironment biomarkers in 33 cases.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Thirty-three patients with advanced melanoma, who underwent ICI treatment at the Chang Gung Memorial Hospital in Taiwan, were recruited. The study evaluated clinical outcomes, including response rate, disease control rate, progression-free survival (PFS) rate and overall survival (OS) rate. Archived tissue samples from 33 cases were subjected to NGS by ACTOnco, and ACTTME was employed in 25 cases.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The most prevalent driver mutations were <i>BRAF</i> mutations (24.2%), followed by <i>NRAS</i> (15.2%), <i>KIT</i> (12.1%), <i>KRAS</i> (9.1%) and <i>NF1</i> (9.1%) mutations. Acral/mucosal melanomas exhibited distinct mutation patterns compared to non-acral melanomas. Tumour mutational burden estimated using ACTOnco was not associated with ICI efficacy. Notably, genetic alterations in the p53 pathway (<i>CDKNA2</i> loss, <i>MDM2</i> gain/amplification and <i>TP53</i> mutation) accounted for 36.4% and were significantly associated with unfavourable PFS (median PFS 2.7 months <i>vs.</i> 3.9 months, <i>P =</i> 0.0394). Moreover, 26 genes were identified as differentially expressed genes that were upregulated in patients with clinical benefits compared to those without benefits. Four genes, <i>GZMH</i>, <i>GZMK</i>, <i>AIM2</i> and <i>CTLA4</i>, were found to be associated with both PFS and OS.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>Genetic alterations in the p53 pathway may be critical in Asian patients with melanoma undergoing ICI treatment. Further investigation is required to explore this mechanism and validate these findings.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 8","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/5d/ae/CTI2-12-e1465.PMC10463562.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10118760","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Glucocorticoid regulation of the mTORC1 pathway modulates CD4+ T cell responses during infection 糖皮质激素调节mTORC1通路在感染期间调节CD4+ T细胞反应
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-08-29 DOI: 10.1002/cti2.1464
Huihui Chen, Zhiwen Liu, Jie Zha, Li Zeng, Runyan Tang, Chengyuan Tang, Juan Cai, Chongqing Tan, Hong Liu, Zheng Dong, Guochun Chen
{"title":"Glucocorticoid regulation of the mTORC1 pathway modulates CD4+ T cell responses during infection","authors":"Huihui Chen,&nbsp;Zhiwen Liu,&nbsp;Jie Zha,&nbsp;Li Zeng,&nbsp;Runyan Tang,&nbsp;Chengyuan Tang,&nbsp;Juan Cai,&nbsp;Chongqing Tan,&nbsp;Hong Liu,&nbsp;Zheng Dong,&nbsp;Guochun Chen","doi":"10.1002/cti2.1464","DOIUrl":"10.1002/cti2.1464","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>Conventional glucocorticoid (GC) treatment poses significant risks for opportunistic infections due to its suppressive impact on CD4<sup>+</sup> T cells. This study aimed to explore the mechanisms by which GCs modulate the functionality of CD4<sup>+</sup> T cells during infection.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We consistently measured FOXP3, inflammatory cytokines and phospho-S6 ribosomal protein levels in CD4<sup>+</sup> T cells from patients undergoing conventional GC treatment. Using Foxp3<sup>EGFP</sup> animals, we investigated the dynamic activation of the mechanistic target of rapamycin complex 1 (mTORC1) pathway and its correlation with the immunoregulatory function of CD4<sup>+</sup> T cells under the influence of GCs.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>GCs dynamically altered the expression pattern of FOXP3 in CD4<sup>+</sup> T cells, promoting their acquisition of an active T regulatory (Treg) cell phenotype upon stimulation. Mechanistically, GCs undermined the kinetics of the mTORC1 pathway, which was closely correlated with phenotype conversion and functional properties of CD4<sup>+</sup> T cells. Dynamic activation of the mTORC1 signaling modified the GC-dampened immunoregulatory capacity of CD4<sup>+</sup> T cells by phenotypically and functionally bolstering the FOXP3<sup>+</sup> Treg cells. Interventions targeting the mTORC1 pathway effectively modulated the GC-dampened immunoregulatory capacity of CD4<sup>+</sup> T cells.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>These findings highlight a novel mTORC1-mediated mechanism underlying CD4<sup>+</sup> T cell immunity in the context of conventional GC treatment.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 8","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/10/da/CTI2-12-e1464.PMC10463561.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10125547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A unique cytotoxic CD4+ T cell-signature defines critical COVID-19 一种独特的细胞毒性CD4+ T细胞特征定义了重症COVID-19
IF 5.8 2区 医学
Clinical & Translational Immunology Pub Date : 2023-08-28 DOI: 10.1002/cti2.1463
Sarah Baird, Caroline L Ashley, Felix Marsh-Wakefield, Sibel Alca, Thomas M Ashhurst, Angela L Ferguson, Hannah Lukeman, Claudio Counoupas, Jeffrey J Post, Pamela Konecny, Adam Bartlett, Marianne Martinello, Rowena A Bull, Andrew Lloyd, Alice Grey, Owen Hutchings, Umaimainthan Palendira, Warwick J Britton, Megan Steain, James A Triccas
{"title":"A unique cytotoxic CD4+ T cell-signature defines critical COVID-19","authors":"Sarah Baird,&nbsp;Caroline L Ashley,&nbsp;Felix Marsh-Wakefield,&nbsp;Sibel Alca,&nbsp;Thomas M Ashhurst,&nbsp;Angela L Ferguson,&nbsp;Hannah Lukeman,&nbsp;Claudio Counoupas,&nbsp;Jeffrey J Post,&nbsp;Pamela Konecny,&nbsp;Adam Bartlett,&nbsp;Marianne Martinello,&nbsp;Rowena A Bull,&nbsp;Andrew Lloyd,&nbsp;Alice Grey,&nbsp;Owen Hutchings,&nbsp;Umaimainthan Palendira,&nbsp;Warwick J Britton,&nbsp;Megan Steain,&nbsp;James A Triccas","doi":"10.1002/cti2.1463","DOIUrl":"10.1002/cti2.1463","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Objectives</h3>\u0000 \u0000 <p>SARS-CoV-2 infection causes a spectrum of clinical disease presentation, ranging from asymptomatic to fatal. While neutralising antibody (NAb) responses correlate with protection against symptomatic and severe infection, the contribution of the T-cell response to disease resolution or progression is still unclear. As newly emerging variants of concern have the capacity to partially escape NAb responses, defining the contribution of individual T-cell subsets to disease outcome is imperative to inform the development of next-generation COVID-19 vaccines.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>Immunophenotyping of T-cell responses in unvaccinated individuals was performed, representing the full spectrum of COVID-19 clinical presentation. Computational and manual analyses were used to identify T-cell populations associated with distinct disease states.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Critical SARS-CoV-2 infection was characterised by an increase in activated and cytotoxic CD4<sup>+</sup> lymphocytes (CTL). These CD4<sup>+</sup> CTLs were largely absent in asymptomatic to severe disease states. In contrast, non-critical COVID-19 was associated with high frequencies of naïve T cells and lack of activation marker expression.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusion</h3>\u0000 \u0000 <p>Highly activated and cytotoxic CD4<sup>+</sup> T-cell responses may contribute to cell-mediated host tissue damage and progression of COVID-19. Induction of these potentially detrimental T-cell responses should be considered when developing and implementing effective COVID-19 control strategies.</p>\u0000 </section>\u0000 </div>","PeriodicalId":152,"journal":{"name":"Clinical & Translational Immunology","volume":"12 8","pages":""},"PeriodicalIF":5.8,"publicationDate":"2023-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/95/2f/CTI2-12-e1463.PMC10461786.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10307651","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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