{"title":"Context preserving dynamic word cloud visualization","authors":"Weiwei Cui, Yingcai Wu, Shixia Liu, Furu Wei, Michelle X. Zhou, Huamin Qu","doi":"10.1109/PACIFICVIS.2010.5429600","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429600","url":null,"abstract":"In this paper, we introduce a visualization method that couples a trend chart with word clouds to illustrate temporal content evolutions in a set of documents. Specifically, we use a trend chart to encode the overall semantic evolution of document content over time. In our work, semantic evolution of a document collection is modeled by varied significance of document content, represented by a set of representative keywords, at different time points. At each time point, we also use a word cloud to depict the representative keywords. Since the words in a word cloud may vary one from another over time (e.g., words with increased importance), we use geometry meshes and an adaptive force-directed model to lay out word clouds to highlight the word differences between any two subsequent word clouds. Our method also ensures semantic coherence and spatial stability of word clouds over time. Our work is embodied in an interactive visual analysis system that helps users to perform text analysis and derive insights from a large collection of documents. Our preliminary evaluation demonstrates the usefulness and usability of our work.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"194 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132240593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Visualizing field-measured seismic data","authors":"Tung-Ju Hsieh, Cheng-Kai Chen, K. Ma","doi":"10.1109/PACIFICVIS.2010.5429610","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429610","url":null,"abstract":"This paper presents visualization of field-measured, time-varying multidimensional earthquake accelerograph readings. Direct volume rendering is used to depict the space-time relationships of seismic readings collected from sensor stations in an intuitive way such that the progress of seismic wave propagation of an earthquake event can be directly observed. The resulting visualization reveals the sequence of seismic wave initiation, propagation, attenuation over time, and energy releasing events. We provide a case study on the magnitude scale Mw 7.6 Chi-Chi earthquake in Taiwan, which is the most thoroughly recorded earthquake event ever in the history. More than 400 stations recorded this event, and the readings from this event increased global strong-motion records five folds. Each station measured east-west, north-south, and vertical component of acceleration for approximately 90 seconds. The sensor network released the initial raw data within minutes after the Chi-Chi mainshock. It is essential to have a visualization system for fast data exploring and analyzing, offering crucial visual analytical information for scientists to make quick judgments. Raw data requires preprocessing before it can be rendered. We generated a sequence of ground-motion wave-field maps of 350 × 200 regular grid covers the entire Taiwan island from the sensor network readings. The result is a total of 1000 ground-motion wave-field maps with 0.1 second interval, forming a 1000 × 350 × 200 volume data set. We show that visualizing the time-varying component of the data spatially uncovers the changing features hidden in the data.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124537471","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jörg-Stefan Praßni, T. Ropinski, Jörg Mensmann, K. Hinrichs
{"title":"Shape-based transfer functions for volume visualization","authors":"Jörg-Stefan Praßni, T. Ropinski, Jörg Mensmann, K. Hinrichs","doi":"10.1109/PACIFICVIS.2010.5429624","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429624","url":null,"abstract":"We present a novel classification technique for volume visualization that takes the shape of volumetric features into account. The presented technique enables the user to distinguish features based on their 3D shape and to assign individual optical properties to these. Based on a rough pre-segmentation that can be done by windowing, we exploit the curve-skeleton of each volumetric structure in order to derive a shape descriptor similar to those used in current shape recognition algorithms. The shape descriptor distinguishes three main shape classes: longitudinal, surface-like, and blobby shapes. In contrast to previous approaches, the classification is not performed on a per-voxel level but assigns a uniform shape descriptor to each feature and therefore allows a more intuitive user interface for the assignment of optical properties. By using the proposed technique, it becomes for instance possible to distinguish blobby heart structures filled with contrast agents from potentially occluding vessels and rib bones. After introducing the basic concepts, we show how the presented technique performs on real world data, and we discuss current limitations.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"74 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123169496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Crossing-free many-to-one boundary labeling with hyperleaders","authors":"Chun-Cheng Lin","doi":"10.1109/PACIFICVIS.2010.5429592","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429592","url":null,"abstract":"In boundary labeling, each point site is uniquely connected to a label placed on the boundary of an enclosing rectangle by a leader, which may be a rectilinear or straight line segment. Most of the results reported in the literature for boundary labeling deal with the so-called one-to-one boundary labeling, i.e., different sites are labelled differently. In certain applications of boundary labeling, however, more than one site may be required to be connected to a common label. In this case, the presence of crossings among leaders often becomes inevitable such that the labeling often has a high degree of confusion in visualization. In this paper, for multi-site-to-one-label boundary labeling, crossings among leaders are avoided by substituting hyperleaders for leaders and by applying dummy labels (i.e., copies/duplicates of labels). Minimizing the number of dummy labels becomes a critical design issue as dummy labels are not required in the initial setting. Therefore, we consider the problem of minimizing the number of dummy labels for multi-site-to-one-label boundary labeling, i.e., finding the placements of labels and hyperleaders such that the total number of dummy labels is minimized and there are no crossings among hyperleaders. Furthermore, after the number of dummy labels is determined, minimizing the total hyperleader length as well as the bends of hyperleaders is also concerned in postprocessing procedure. In this paper, we present polynomial time algorithms for the above one-side and two-side labeling schemes, and show their correctness from a theoretical point of view. In addition, we provide a simulated annealing algorithm for the four-side labeling schemes with objective to minimize the total number of dummy labels as well as the total leader length. Experimental results show that our four-side solutions look promising, as compared to the optimal solutions.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"120 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134050271","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yunhai Wang, Wei Chen, Guihua Shan, Tingxing Dong, Xue-bin Chi
{"title":"Volume exploration using ellipsoidal Gaussian transfer functions","authors":"Yunhai Wang, Wei Chen, Guihua Shan, Tingxing Dong, Xue-bin Chi","doi":"10.1109/PACIFICVIS.2010.5429612","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429612","url":null,"abstract":"This paper presents an interactive transfer function design tool based on ellipsoidal Gaussian transfer functions (ETFs). Our approach explores volumetric features in the statistical space by modeling the space using the Gaussian mixture model (GMM) with a small number of Gaussians to maximize the likelihood of feature separation. Instant visual feedback is possible by mapping these Gaussians to ETFs and analytically integrating these ETFs in the context of the pre-integrated volume rendering process. A suite of intuitive control widgets is designed to offer automatic transfer function generation and flexible manipulations, allowing an inexperienced user to easily explore undiscovered features with several simple interactions. Our GPU implementation demonstrates interactive performance and plausible scalability which compare favorably with existing solutions. The effectiveness of our approach has been verified on several datasets.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"226 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131420124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yingcai Wu, Huamin Qu, Ka-Kei Chung, Ming-Yuen Chan, Hong Zhou
{"title":"Quantitative effectiveness measures for direct volume rendered images","authors":"Yingcai Wu, Huamin Qu, Ka-Kei Chung, Ming-Yuen Chan, Hong Zhou","doi":"10.1109/PACIFICVIS.2010.5429623","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429623","url":null,"abstract":"With the rapid development in graphics hardware and volume rendering techniques, many volumetric datasets can now be rendered in real time on a standard PC equipped with a commodity graphics board. However, the effectiveness of the results, especially direct volume rendered images, is difficult to validate and users may not be aware of ambiguous or even misleading information in the results. This limits the applications of volume visualization. In this paper, we introduce four quantitative effectiveness measures: distinguishability, contour clarity, edge consistency, and depth coherence measures, which target different effectiveness issues for direct volume rendered images. Based on the measures, we develop a visualization system with automatic effectiveness assessment, providing users with instant feedback on the effectiveness of the results. The case study and user evaluation have demonstrated the high potential of our system.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128681902","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Caleydo: Design and evaluation of a visual analysis framework for gene expression data in its biological context","authors":"A. Lex, M. Streit, E. Kruijff, D. Schmalstieg","doi":"10.1109/PACIFICVIS.2010.5429609","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429609","url":null,"abstract":"The goal of our work is to support experts in the process of hypotheses generation concerning the roles of genes in diseases. For a deeper understanding of the complex interdependencies between genes, it is important to bring gene expressions (measurements) into context with pathways. Pathways, which are models of biological processes, are available in online databases. In these databases, large networks are decomposed into small sub-graphs for better manageability. This simplification results in a loss of context, as pathways are interconnected and genes can occur in multiple instances scattered over the network. Our main goal is therefore to present all relevant information, i.e., gene expressions, the relations between expression and pathways and between multiple pathways in a simple, yet effective way. To achieve this we employ two different multiple-view approaches. Traditional multiple views are used for large datasets or highly interactive visualizations, while a 2.5D technique is employed to support a seamless navigation of multiple pathways which simultaneously links to the expression of the contained genes. This approach facilitates the understanding of the interconnection of pathways, and enables a non-distracting relation to gene expression data. We evaluated Caleydo with a group of users from the life science community. Users were asked to perform three tasks: pathway exploration, gene expression analysis and information comparison with and without visual links, which had to be conducted in four different conditions. Evaluation results show that the system can improve the process of understanding the complex network of pathways and the individual effects of gene expression regulation considerably. Especially the quality of the available contextual information and the spatial organization was rated good for the presented 2.5D setup.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"5 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129859671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M. Haidacher, Daniel Patel, S. Bruckner, A. Kanitsar, E. Gröller
{"title":"Volume visualization based on statistical transfer-function spaces","authors":"M. Haidacher, Daniel Patel, S. Bruckner, A. Kanitsar, E. Gröller","doi":"10.1109/PACIFICVIS.2010.5429615","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429615","url":null,"abstract":"It is a difficult task to design transfer functions for noisy data. In traditional transfer-function spaces, data values of different materials overlap. In this paper we introduce a novel statistical transfer-function space which in the presence of noise, separates different materials in volume data sets. Our method adaptively estimates statistical properties, i.e. the mean value and the standard deviation, of the data values in the neighborhood of each sample point. These properties are used to define a transfer-function space which enables the distinction of different materials. Additionally, we present a novel approach for interacting with our new transfer-function space which enables the design of transfer functions based on statistical properties. Furthermore, we demonstrate that statistical information can be applied to enhance visual appearance in the rendering process. We compare the new method with 1D, 2D, and LH transfer functions to demonstrate its usefulness.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"30 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126874565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"GMap: Visualizing graphs and clusters as maps","authors":"E. Gansner, Yifan Hu, S. Kobourov","doi":"10.1109/PACIFICVIS.2010.5429590","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429590","url":null,"abstract":"Information visualization is essential in making sense out of large data sets. Often, high-dimensional data are visualized as a collection of points in 2-dimensional space through dimensionality reduction techniques. However, these traditional methods often do not capture well the underlying structural information, clustering, and neighborhoods. In this paper, we describe GMap, a practical algorithm for visualizing relational data with geographic-like maps. We illustrate the effectiveness of this approach with examples from several domains.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130217377","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Stack zooming for multi-focus interaction in time-series data visualization","authors":"Waqas Javed, N. Elmqvist","doi":"10.1109/PACIFICVIS.2010.5429613","DOIUrl":"https://doi.org/10.1109/PACIFICVIS.2010.5429613","url":null,"abstract":"Information visualization shows tremendous potential for helping both expert and casual users alike make sense of temporal data, but current time series visualization tools provide poor support for comparing several foci in a temporal dataset while retaining context and distance awareness. We introduce a method for supporting this kind of multi-focus interaction that we call stack zooming. The approach is based on the user interactively building hierarchies of 1D strips stacked on top of each other, where each subsequent stack represents a higher zoom level, and sibling strips represent branches in the visual exploration. Correlation graphics show the relation between stacks and strips of different levels, providing context and distance awareness among the focus points. The zoom hierarchies can also be used as graphical histories and for communicating insights to stakeholders. We also discuss how visual spaces that support stack zooming can be extended with annotation and local statistics computations that fit the hierarchical stacking metaphor.","PeriodicalId":149295,"journal":{"name":"2010 IEEE Pacific Visualization Symposium (PacificVis)","volume":"40 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129175745","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}