BMC Ecology最新文献

{"title":"Phylogeography of higher Diptera in glacial and postglacial grasslands in western North America.","authors":"Anna M Solecki, Jeffrey H Skevington, Christopher M Buddle, Terry A Wheeler","doi":"10.1186/s12898-019-0266-4","DOIUrl":"10.1186/s12898-019-0266-4","url":null,"abstract":"<p><strong>Background: </strong>Pleistocene glaciations have had an important impact on the species distribution and community composition of the North American biota. Species survived these glacial cycles south of the ice sheets and/or in other refugia, such as Beringia. In this study, we assessed, using mitochondrial DNA from three Diptera species, whether flies currently found in Beringian grasslands (1) survived glaciation as disjunct populations in Beringia and in the southern refugium; (2) dispersed northward postglacially from the southern refugium; or (3) arose by a combination of the two. Samples were collected in grasslands in western Canada: Prairies in Alberta and Manitoba; the Peace River region (Alberta); and the southern Yukon Territory. We sequenced two gene regions (658 bp of cytochrome c oxidase subunit I, 510 bp of cytochrome b) from three species of higher Diptera: one with a continuous distribution across grassland regions, and two with disjunct populations between the regions. We used a Bayesian approach to determine population groupings without a priori assumptions and performed analysis of molecular variance (AMOVA) and exact tests of population differentiation (ETPD) to examine their validity. Molecular dating was used to establish divergence times.</p><p><strong>Results: </strong>Two geographically structured populations were found for all species: a southern Prairie and Peace River population, and a Yukon population. Although AMOVA did not show significant differentiation between populations, ETPD did. Divergence time between Yukon and southern populations predated the Holocene for two species; the species with an ambiguous divergence time had high haplotype diversity, which could suggest survival in a Beringian refugium.</p><p><strong>Conclusions: </strong>Populations of Diptera in Yukon grasslands could have persisted in steppe habitats in Beringia through Pleistocene glaciations. Current populations in the region appear to be a mix of Beringian relict populations and, to a lesser extent, postglacial dispersal northward from southern prairie grasslands.</p>","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":"19 1","pages":"53"},"PeriodicalIF":2.2,"publicationDate":"2019-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0266-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37477987","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Increased songbird nest depredation due to Aleppo pine (Pinus halepensis) encroachment in Mediterranean shrubland.","authors":"Asaf Ben-David,&nbsp;Hila Shamon,&nbsp;Ido Izhaki,&nbsp;Ronny Efronny,&nbsp;Roi Maor,&nbsp;Tamar Dayan","doi":"10.1186/s12898-019-0270-8","DOIUrl":"https://doi.org/10.1186/s12898-019-0270-8","url":null,"abstract":"<p><strong>Background: </strong>In recent decades, a decrease of passerine densities was documented in Mediterranean shrublands. At the same time, a widespread encroachment of Aleppo pines (Pinus halepensis) to Mediterranean shrubland occurred. Such changes in vegetation structure may affect passerine predator assemblage and densities, and in turn impact passerine densities. Depredation during the nesting season is an important factor to influence passerine population size. Understanding the effects of changes in vegetation structure (pine encroachment) on passerine nesting success is the main objective of this study. We do so by assessing the effects of Aleppo pine encroachment on Sardinian warbler (Sylvia melanocephala) nest depredation in Mediterranean shrublands. We examined direct and indirect predation pressures through a gradients of pine density, using four methods: (1) placing dummy nests; (2) acoustic monitoring of mobbing events; (3) direct observations on nest predation using cameras; and (4) observation of Eurasian jay (Garrulus glandarius) behaviour as indirect evidence of predation risk.</p><p><strong>Results: </strong>We found that Aleppo pine encroachment to Mediterranean shrublands increased nest predation by Eurasian jays. Nest predation was highest in mixed shrubland and pines. These areas are suitable for warblers but had high occurrence rate of Eurasian jays.</p><p><strong>Conclusions: </strong>Encroaching pines directly increase activity of Eurasian jays in shrubland habitats, which reduced the nesting success of Sardinian warblers. These findings are supported by multiple methodologies, illustrating different predation pressures along a gradient of pine densities in natural shrublands. Management of Aleppo pine seedlings and removal of unwanted trees in natural shrubland might mitigate arrival and expansion of predators and decrease the predation pressure on passerine nests.</p>","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":"19 1","pages":"52"},"PeriodicalIF":2.2,"publicationDate":"2019-12-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0270-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37466422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"FACEPAI: a script for fast and consistent environmental DNA processing and identification","authors":"Emma Wahlberg","doi":"10.1186/s12898-019-0269-1","DOIUrl":"https://doi.org/10.1186/s12898-019-0269-1","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0269-1","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46266235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"High nutrient uptake efficiency and high water use efficiency facilitate the spread of Stellera chamaejasme L. in degraded grasslands","authors":"Lizhu Guo, Jiahuan Li, Wei He, Li Liu, Ding Huang, Kun Wang","doi":"10.1186/s12898-019-0267-3","DOIUrl":"https://doi.org/10.1186/s12898-019-0267-3","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0267-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46801996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Impact of global warming scenarios on life-history traits of Tetranychus evansi (Acari: Tetranychidae)","authors":"N. Ghazy, T. Gotoh, Takeshi Suzuki","doi":"10.1186/s12898-019-0264-6","DOIUrl":"https://doi.org/10.1186/s12898-019-0264-6","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0264-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46187211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Assemblages of certain benthic molluscs along the southwestern Atlantic: from subtidal to deep sea","authors":"V. Teso, D. Urteaga, G. Pastorino","doi":"10.1186/s12898-019-0263-7","DOIUrl":"https://doi.org/10.1186/s12898-019-0263-7","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0263-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48014496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Experimental Listeria–Tetrahymena–Amoeba food chain functioning depends on bacterial virulence traits","authors":"V. Pushkareva, Julia I. Podlipaeva, A. Goodkov, S. Ermolaeva","doi":"10.1186/s12898-019-0265-5","DOIUrl":"https://doi.org/10.1186/s12898-019-0265-5","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0265-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45549642","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The luxury effect beyond cities: bats respond to socioeconomic variation across landscapes","authors":"Han Li, K. Parker, M. Kalcounis-Rueppell","doi":"10.1186/s12898-019-0262-8","DOIUrl":"https://doi.org/10.1186/s12898-019-0262-8","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0262-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45921123","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Ecological niche modelling to estimate the distribution of Culicoides, potential vectors of bluetongue virus in Senegal.","authors":"Mamadou Ciss, Biram Biteye, Assane Gueye Fall, Moussa Fall, Marie Cicille Ba Gahn, Louise Leroux, Andrea Apolloni","doi":"10.1186/s12898-019-0261-9","DOIUrl":"10.1186/s12898-019-0261-9","url":null,"abstract":"<p><strong>Background: </strong>Vector-borne diseases are among the leading causes of morbidity and mortality in humans and animals. In the Afrotropical region, some are transmitted by Culicoides, such as Akabane, bluetongue, epizootic haemorrhagic fever and African horse sickness viruses. Bluetongue virus infection has an enormous impact on ruminant production, due to its high morbidity and mortality rates.</p><p><strong>Methods: </strong>A nationwide Culicoides trapping campaign was organized at the end of the 2012 rainy season in Senegal. A Maximum Entropy approach (MaxEnt), Boosted Regression Tree (BRT) method and Ecological Niche Factor Analysis (ENFA) were used to develop a predictive spatial model for the distribution of Culicoides, using bio-climatic variables, livestock densities and altitude.</p><p><strong>Results: </strong>The altitude, maximum temperature of the warmest month, precipitation of the warmest quarter, mean temperature of the wettest quarter, temperature seasonality, precipitation of the wettest quarter and livestock density were among the most important factors to predict suitable habitats of Culicoides. Culicoides occurrences were, in most of the cases, positively correlated to precipitation variables and livestock densities; and negatively correlated to the altitude and temperature indices. The Niayes area and the Groundnut basin were the most suitable habitats predicted.</p><p><strong>Conclusion: </strong>We present ecological niche models for different Culicoides species, namely C. imicola, C. oxystoma, C. enderleini and C. miombo, potential vectors of bluetongue virus, on a nationwide scale in Senegal. Through our modelling approach, we were able to determine the effect of bioclimatic variables on Culicoides habitats and were able to generate maps for the occurrence of Culicoides species. This information will be helpful in developing risk maps for disease outbreaks.</p>","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":"19 1","pages":"45"},"PeriodicalIF":2.2,"publicationDate":"2019-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6825335/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41191803","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Environmental variation mediates the prevalence and co-occurrence of parasites in the common lizard, Zootoca vivipara","authors":"Qiangsheng Wu, M. Richard, A. Rutschmann, D. Miles, J. Clobert","doi":"10.1186/s12898-019-0259-3","DOIUrl":"https://doi.org/10.1186/s12898-019-0259-3","url":null,"abstract":"","PeriodicalId":9232,"journal":{"name":"BMC Ecology","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2019-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s12898-019-0259-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48632071","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}