Biodiversitas最新文献

{"title":"Evaluation of nutritive values of various non-conventional protein sources as potential feed ingredients for ruminants","authors":"SAMADI SAMADI, SITTI WAJIZAH, SAID MIRZA PRATAMA, ANURAGA JAYANEGARA","doi":"10.13057/biodiv/d240745","DOIUrl":"https://doi.org/10.13057/biodiv/d240745","url":null,"abstract":"Abstract. Samadi, Wajizah S, Pratama SM, Jayanegara A. 2023. Evaluation of nutritive values of various non-conventional protein sources as potential feed ingredients for ruminants. Biodiversitas 24: 4069-4078. The purpose of this study was to evaluate the nutritive values of various non-conventional protein sources as potential ingredients for ruminants, including chemical composition, in vitro digestibility, rumen fermentation, and methane emissions. Seven various non-conventional protein sources; grasshopper meal (GM), earthworm meal (EWM), fish by-product meal (FbPM), centipede meal (CM), snail meal (SM), ant eggs meal (AEM), mealworm meal (MWM) and one conventional protein source; soybean meal (SBM) were used in this study. All samples were dried at the temperature of 60oC for 24h and ground by the use of a hammer mill to pass a 1 mm sieve. The ground samples were utilized for further analysis, including chemical composition, in vitro digestibility, rumen fermentation, and methane emissions. Incubation was conducted with three replications in the water bath and temperature was maintained at 39ºC for 48h. All data were statistically analyzed using SPSS version 16 and the difference between treatments was stated (P<0.05). The results of the study indicated that all the samples contained various CP. The NDICP and ADICP in samples were low. All samples had high IVDMD and IVOMD, the highest in FbPM (P<0.01). Methane emission of the samples was lower than SBM (P<0.01).","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135065010","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"SDS-PAGE protein profile of albumin extracted by steaming from four marine and three brackish-water fishes","authors":"NUR FATMA, METUSALACH METUSALACH, NURPUDJI ASTUTI TASLIM, MALA NURILMALA","doi":"10.13057/biodiv/d240740","DOIUrl":"https://doi.org/10.13057/biodiv/d240740","url":null,"abstract":"Abstract. Fatma N, Metusalach, Taslim NA, Nurilmala M. 2023. SDS-PAGE protein profile of albumin extracted by steaming from four marine and three brackish-water fishes. Biodiversitas 24: 4027-4033. Snakehead fish is a type of fish that has been known as the best source of fish albumin. However, the increasing demand for and exploitation of snakehead fish albumin is not accompanied by the availability of sustainable snakehead fish stocks. Snakehead fish stocks in nature continue to experience depletion and cultivation efforts that have been carried out so far have not yielded satisfactory results. For this reason, it is necessary to find alternative sources of fish albumin. The purpose of this study was to determine the molecular weight of the albumin proteins extracted by water bath steaming from four marine fishes (Indian scad Decapterus russelli, short-bodied mackerel Rastrelliger brachysoma, goldband fusilier Pterocaesio chrysozona, Japanese threadfin bream Nemipterus japonicus) and three brackish-water fishes (white-lipped eel catfish Paraplotosus albilabris, barramundi Lates calcarifer, milkfish Chanos chanos). The method used was Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis (SDS-PAGE) electrophoresis. Each sample was steamed in a water bath at 50°C for 30 minutes to obtain the crude extract's optimal yield and albumin content. The molecular weights of each protein band were analyzed using the Photocapt application, visualized and tabulated, and analyzed descriptively. Indian scad had six protein bands with three major (48 kD, 37 kD, 32 kD) and three minor bands (66 kD, 25 kD, 15 kD). Shortbodied mackerel had one major protein band (26 kD). Goldband fusilier had one major (33 kD) and four minor bands (50 kD, 69 kD, 57 kD, 26 kD). Japanese threadfin bream had one major (62 kD) and three minor bands (171 kD, 72 kD, 26 kD). White-lipped eel catfish had two major (41 kD, 34 kD and two minor bands (70 kD, 26 kD). Barramundi had one major (26 kD) and two minor bands (171 kD, 87 kD). Milkfish had one major (41 kD) and four minor bands (333 kD, 135 kD, 31 kD, 25 kD). It is hoped that this research will provide information on which fish have the potential as a source of fish albumin in terms of protein composition which resembles snakehead fish so that the properties provided are as good as albumin from snakehead fish.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135064795","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Short Communication: Morphological, biochemical, and molecular identification of cellulolytic bacteria isolated from feces of endemic tropical herbivores","authors":"SRI SUHARTI, NUR NOVRARIANI, KOMANG G. WIRYAWAN","doi":"10.13057/biodiv/d240742","DOIUrl":"https://doi.org/10.13057/biodiv/d240742","url":null,"abstract":"Abstract. Suharti S, Novrariani N, Wiryawan KG. 2023. Short Communication: Morphological, biochemical, and molecular identification of cellulolytic bacteria isolated from feces of endemic tropical herbivores. Biodiversitas 24: 4046-4051. Indonesia has endemic herbivores that consume lignocellulose feedstuffs including grass, tree foliage, rice straw, and legume, indicating the presence of cellulolytic bacteria in their gastrointestinal tracts. Therefore, the aim of this study was to isolate and identify cellulolytic bacteria from the feces of tropical endemic herbivores, including anoa (Bubalus depressicornis), banteng (Bos javanicus), muntjak (Muntiacus muntjak), and timor deer (Rusa timorensis). Bacteria were isolated using the serial dilution technique and screened on Carboxy Methyl Cellulose (CMC) media. The selected isolates were identified based on their morphological and biochemical characteristics, cellulase enzyme activity, and molecular identification of 16S rDNA. The result showed that a total of five bacterial isolates were isolated from feces of anoa, banteng, muntjak, and timor deer. In addition, isolates exhibited characteristics of facultative anaerobes with gram-positive coccus, fermenting glucose, fructose, sucrose, starch, and cellulose. Based on cellulolytic index, isolates from anoa and banteng feces showed high cellulolytic activity with an index of about 1.2, indicating their potential as cellulose-degrading bacteria. Molecular identification and phylogeny analysis of cellulolytic bacteria isolates from anoa and banteng feces showed 100% similarities with Enterococcus faecium. Therefore, bacteria from feces of tropical endemic herbivores, especially anoa and banteng, possess cellulolytic activity and have potential as cellulolytic probiotic for ruminants that feed on forage-based diet. This is the first study to document the cellulolytic activity of anoa, and banteng feces.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135065012","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The vector of Pineapple Mealybug Wilt-associated Virus (PMWaV) in Sipahutar pineapples in North Tapanuli, Indonesia","authors":"LISNAWITA LISNAWITA, AHMAD RAFIQI TANTAWI, MARYANI CYCCU TOBING, ARTHA JUNITA HUTAHAYAN, WISMAROH SANNIWATI SARAGIH, DEWI SARTIAMI","doi":"10.13057/biodiv/d240743","DOIUrl":"https://doi.org/10.13057/biodiv/d240743","url":null,"abstract":"Abstract. Lisnawita, Tantawi AR, Tobing MC, Hutahayan AJ, Saragih WS, Sartiami D. 2023. The vector of Pineapple Mealybug Wilt-associated Virus (PMWaV) in Sipahutar pineapples in North Tapanuli, Indonesia. Biodiversitas 24: 4052-4059. The Pineapple Mealybug Wilt-associated Virus (PMWaV) disease is one of the most important diseases in pineapples. It Is widely spread in almost all pineapple plantations, including those in North Tapanuli District, North Sumatra Province, Indonesia. Currently, there is still little information on the PMWaV disease and the species of mealybug found in Sipahutar pineapples in the North Tapanuli District. This research aims to identify mealybugs as the vectors that carry the virus that causes PMWaV disease in Sipahutar pineapples. Mealybug samples were taken from 12 villages in four sub-districts in the center of Sipahutar pineapples plantations in the North Tapanuli District. The four sub-districts were Sipahutar Sub-district from Siabal Abal IV Village, Sabungan Nihuta I Village, and Sabungan Nihuta II Village; Siborongborong Sub-district from Bahal Batu I Village, Bahal Batu II Village, and Lobu Siregar Village; Tarutung Sub-district from Parbaju Tonga Village, Jambur Nauli Village, and Sihujur Village; Pangaribuan Sub-district from Pansurnatolu Village, Sigotom Village, and Rahut Bosi Village. Samples were identified morphologically and molecularly. The results of the identification using both methods showed that the mealybugs found on Sipahutar pineapples with PMWaV symptoms from the 12 villages were Dysmicoccus brevipes species.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135065005","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Morphology of Setaria spp. (Setariidae; Nematoda) in Aceh cattle, Indonesia","authors":"MUHAMMAD HANAFIAH, FARIDA ATHAILLAH, T. ZAHRIAL HELMI, AMALIA SUTRIANA","doi":"10.13057/biodiv/d240754","DOIUrl":"https://doi.org/10.13057/biodiv/d240754","url":null,"abstract":"Abstract. Hanafiah M, Athaillah F, Helmi TZ, Sutriana A. 2023. Morphology of Setaria spp. (Setariidae; Nematoda) in Aceh cattle, Indonesia. Biodiversitas 24: 4151-4160. Setaria spp. filaria usually inhabit the peritoneal cavity and its microfilaria can be found in cattle blood. Adult worms are considered non-pathogenic but may cause mild fibrinous peritonitis. However, microfilaria can cause serious conditions. The worms migrate randomly to the central nervous system in a non-natural host such as sheep, horses, and goats, causing serious neuropathological symptoms which are known as epizootic cerebrospinal setariosis or nematodiasis cerebrospinal. The objective of this research was to determine the prevalence of Setaria spp. microfilaria in the blood of infected Aceh cattle, identify the worm species in the peritoneal cavity, and determine the morphological difference of Setaria spp. through light microscope (LM) and Scanning Electron Microscope (SEM). This research was performed on 150 Aceh cattle slaughtered in Banda Aceh slaughterhouse. The hematocrit microcapillary method and modified Knott’s Technique were used to determine the presence of Setaria spp. microfilaria in blood, while LM and SEM were used to identify Setaria spp. adult worm. The results showed that Setaria spp. was detected in Aceh cattle blood based on modified Knott’s Technique and hematocrit microcapillary method with a similar prevalence of 13.3%. The worm identification revealed the presence of Setaria spp. in the peritoneal cavity of Aceh cattle. The morphological differences between Setaria digitata and Setaria labiatopapillosa were successfully discovered through LM and SEM studies.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135065015","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Comparative study of the application fish apartments in Situbondo and Probolinggo, East Java, Indonesia","authors":"WAHYU ISRONI, ZULKISAM PRAMUDIA, ANJAS SASANA BAHRI, MEGA ASRI RISQIANA, NURUL MAULIDA, TIA DWI IRAWANDANI","doi":"10.13057/biodiv/d240741","DOIUrl":"https://doi.org/10.13057/biodiv/d240741","url":null,"abstract":"Abstract. Isroni W, Pramudia Z, Bahri AS, Risqiana MA, Maulida N, Irawandani TD. 2023. Comparative study of the application fish apartments in Situbondo and Probolinggo, East Java, Indonesia. Biodiversitas 24: 4034-4045. Fisheries resources which are common property in their utilization are vulnerable to overfishing conditions due to exploratory actions. In addition, the use of destructive fishing gear and habitat degradation has a great impact on fisheries productivity which continues to decrease. Fish apartments as alternative artificial habitat have been successfully applied in Probolinggo, especially for coral organisms. This study compares the application of fish apartments in two different locations, Karang Katon Probolinggo and Karang Mayit Beach Situbondo. Through descriptive and valuative approaches, the survey results showed that in Karang Katon there were 5 species, the highest composition level is Acanthurus achilles (51.56%).Karang Mayit Beach there were 3 species, the highest composition level is Chaetodon octofasciatus (60.56%). The highest abundance is Acanthurus achilles (34.4 ind/m2) in Karang Katon and Chaetodon octofasciatus (42.2 ind/m2) in Karang Mayit Beach. The diversity index in Karang Katon-1.280, while in Karang Mayit Beach-0.853. The dominance index in Karang Katon 0.343, while in Karang Mayit Beach 0.496. Based on this research, the analysis showed positive results for both different locations, indicating it can be used as new habitats for sustainability and increased productivity of fisheries resources.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135064785","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Molecular evaluation of genetic diversity and relationships of Musa cultivars in Thailand using Start Codon Targeted (SCoT) markers","authors":"SARUDA NITIWORAKARN, WUTTICHAI PHAE-NGAM, ONGKARN VANIJAJIVA","doi":"10.13057/biodiv/d240744","DOIUrl":"https://doi.org/10.13057/biodiv/d240744","url":null,"abstract":"Abstract. Nitiworakarn S, Phae-Ngam W, Vanijajiva O. 2023. Molecular evaluation of genetic diversity and relationships of Musa cultivars in Thailand using Start Codon Targeted (SCoT) markers. Biodiversitas 24: 4060-4068. Musa cultivars are mostly obtained from crossing between wild diploid subspecies of M. acuminata (A genome) and M. balbisiana (B genome), and they reveal numerous levels of ploidy and genomic constitution. The present study, for the first time, investigated the genetic diversity of 90 Musa cultivars from 17 localities of Chai Badan district in Lopburi Province, Thailand, using start codon targeted (SCoT) markers. The SCoT technique has shown very high repeatability for characterizing Musa cultivars. The result indicated that DNA fingerprints from 30 SCoT primers generated 244 amplicons, among which 238 bands (97.54%) were polymorphic, with a mean of 7.93 polymorphic bands per primer. The average polymorphism information content (PIC) was high, ranging from 0.345 to 0.483, with an average of 0.432. Genetic diversity and its partitioning parameters were calculated and demonstrated that present Musa cultivars maintain relatively high genetic diversity. The unweighted pair-group method with an arithmetic cluster analysis, principal coordinate analysis and STRUCTURE analysis results were the same and showed the clear division of the genotypes into two distinct clusters, which were cluster-I consisted of only the AA genomes and cluster-II comprised of ABB and BB genomes. In conclusion, SCoT markers obtained here showed their manipulation in genetic diversity and the relationship of cultivated Musa, which would be practical for genetic preservation and continuing breeding programs in Thailand and other regions.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135064787","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The productivity, chemical composition and nutritional value of pastures dominated by Artemisia diffusa and Cousinia resinosa in arid lands of southwestern Uzbekistan","authors":"BAXRITDIN BAZAROV, ZAYNITDIN RAJAMURADOV, MARS SAFIN, ASATILLO RAJABOV, DAVRON KHAYITOV, MIRZOXID KUZIEV, SHARIFKUL AMINJONOV, MARKHAMAT ISMAYILOVA, JASUR KUDRATOV, MIRZAAHMAD KHUJABEKOV, DILOVAR KHAYDAROV","doi":"10.13057/biodiv/d240730","DOIUrl":"https://doi.org/10.13057/biodiv/d240730","url":null,"abstract":"Abstract. Bazarov B, Rajamuradov Z, Safin M, Rajabov A, Khayitov D, Kuziev M, Aminjonov S, Ismayilova M, Kudratov J, Khujabekov M, Khaydarov D. 2023. The productivity, chemical composition and nutritional value of pastures dominated by Artemisia diffusa and Cousinia resinosa in arid lands of southwestern Uzbekistan. Biodiversitas 24: 3916-3923. In recent years, extensive degradation of pastures has been observed all over the world as a result of drastic changes in climate and the increase of anthropogenic factors. As a result, the biological diversity of plant communities in pastures decreases, and specific changes occur in dry mass productivity, nutritional value, and other indicators of plant biomass. Therefore, studies aimed at assessing the condition of the vegetation in pastures are important. This research is one of the first studies of this type aimed at determining the biomass yield of pastures dominated by Artemisia diffusa Krasch. ex Poljako and Cousinia resinosa Juz. at varying elevations in arid areas of the southwestern regions of Uzbekistan, analyzing the chemical composition and nutritional value contained in the plants and evaluating the yield and quality of milk of goats fed with such plants. The results showed that dry mass yield, chemical composition, amount of substance, and nutritional value of the biomass produced by the plants in the pastures were directly influenced by the type of plants that make up the pasture, the elevation of the pastures, and climate factors (i.e., season). Our analysis also showed that the resiproductivity, chemical composition, and nutritional parameters were the highest in the mountain pastures compared to those in the hill and desert pastures. Goats fed by grazing in the pastures produced a higher yield and quality of milk compared to goats fed with conventional rations. The findings of this study explain the diversity of the productivity, chemical composition, nutritional value, and potential of the biomass produced by plants in pastures with dominant species A. diffusa and C. resinosa in increasing goat milk production in arid regions.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135602892","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Gastronomic ethnobotany of traditional vegetables among the Sundanese in rural West Java, Indonesia","authors":"BUDIAWATI S. ISKANDAR, BUDI IRAWAN, DEDE MULYANTO, JOHAN ISKANDAR, AFDILAH AFINANDA, BUDI RAJAB","doi":"10.13057/biodiv/d240732","DOIUrl":"https://doi.org/10.13057/biodiv/d240732","url":null,"abstract":"Abstract. Iskandar BS, Irawan B, Mulyanto D, Iskandar J, Afinanda A, Rajab B. 2023. Gastronomic ethnobotany of traditional vegetables among the Sundanese in rural West Java, Indonesia. Biodiversitas 24: 3932-3950. Sundanese people in West Java have been known for their tradition of consuming various vegetable plants (Lalab). This study aims to elucidate the Traditional Ecological Knowledge (TEK) on various vegetable plants, folk classification, and use and processing of vegetable plants for family use in the rural Sundanese community in Cijambu Village, Tanjungsari Sub-district, Sumedang District, West Java, Indonesia. This study employed mixed qualitative and quantitative methods with an ethnobotanical and gastronomic approach. The results showed that 67 different local varieties (landraces) of vegetable plants were documented from 65 species, representing 56 genera and 27 families that the Sundanese people of Cijambu commonly use. These vegetable plants can be classified into three categories: vegetable source, part used, and use and processing of vegetables. The people obtain their vegetables from various sources, such as their homegardens, gardens, rice fields, Perhutani agroforests, and other non-farming sources, including markets, small village shops, and vegetable sellers. The parts of vegetable plants usually consumed by the people of Cijambu Village can be divided into eight parts: the bulb, flower, fruit, leaf, rhizome, root/tuber, seed, and shoot. The vegetable plants are traditionally consumed as fresh raw salad and cooked vegetables, spices, and at least 12 main or basic types of Sundanese food meals, namely various Acar, Asinan, Buntil, Karedok, Lodeh, Lotek, Rujak, Sambel, Sayur/Angeun, Semur, Tumis/Oseng, and Urab with a total of 58 kinds of food meals. At the same time, various Sundanese chili sauces (Sambel) were documented in at least 14 types. Based on ethnobotanical gastronomy, the Sundanese community's cultural practice of consuming Lalab results from a complex interaction between human communities, food, and their local environment.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135602518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Genetic relationships and genome verification of Thai banana cultivars using Random Amplification of Polymorphic DNA (RAPD) markers","authors":"THANITA BOONSRANGSOM, CHATTHIDAPHON FUENGHOI, DUANGPORN PREMJET, KUNLAYANEE SUVITTAWAT, KUMROP RATANASUT, KAWEE SUJIPULI","doi":"10.13057/biodiv/d240713","DOIUrl":"https://doi.org/10.13057/biodiv/d240713","url":null,"abstract":"Abstract. Boonsrangsom T, Fuenghoi C, Premjet D, Suvittawat K, Ratanasut K, Sujipuli K. 2023. Genetic relationships and genome verification of Thai banana cultivars using Random Amplification of Polymorphic DNA (RAPD) markers. Biodiversitas 24: 3758-3765. Edible bananas and plantains, belonging to the family Musaceae, genus Musa, represent one of the most important fruit crops, with an annual production of more than 65 million tons worldwide. Bananas have several hybrid variations since they are descended from the two species Musa acuminata Colla (AA genome) and Musa balbisiana Colla (BB genome). Different morphological traits divide almost hybrid bananas into various genomic groupings. Banana genome categorization and identification, however, have always been challenging issues. This study aimed to assess the genetic relationships and verify the genomes of Thai banana cultivars using random amplification of polymorphic DNA (RAPD) markers. Using the 15 selected RAPD markers, 149 RAPD bands were found, with sizes ranging from 0.2 to 3.2 kb, and 88.6% were polymorphic. Polymorphic information content (PIC) values ranged from 0.18 to 0.42, averaging 0.30. Based on the Jaccard coefficient, the unweighted pair-group method arithmetic average (UPGMA) analysis showed that the banana samples had a similarity range of 0.27 to 1.00 with a mean of 0.56, demonstrating an abundance of viability across six banana genomes. The dendrogram generated from RAPD data revealed that all 18 Musa samples could be divided into two main groups (Group I and II). Three additional subgroups were created for each primary group (A, B, and C). The accurate identification and genetic data on the available genetic resources for bananas will be beneficial for breeding and conservation programs.","PeriodicalId":8894,"journal":{"name":"Biodiversitas","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135602525","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}