Automated experimentation最新文献

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eCAT: Online electronic lab notebook for scientific research. eCAT:用于科学研究的在线电子实验笔记本。

Automated experimentation Pub Date : 2009-10-29 DOI: 10.1186/1759-4499-1-4

Nigel H Goddard, Rory Macneil, Jonathan Ritchie

{"title":"eCAT: Online electronic lab notebook for scientific research.","authors":"Nigel H Goddard, Rory Macneil, Jonathan Ritchie","doi":"10.1186/1759-4499-1-4","DOIUrl":"https://doi.org/10.1186/1759-4499-1-4","url":null,"abstract":"Background: eCAT is an electronic lab notebook (ELN) developed by Axiope Limited. It is the first online ELN, the first ELN to be developed in close collaboration with lab scientists, and the first ELN to be targeted at researchers in non-commercial institutions. eCAT was developed in response to feedback from users of a predecessor product. By late 2006 the basic concept had been clarified: a highly scalable web-based collaboration tool that possessed the basic capabilities of commercial ELNs, i.e. a permissions system, controlled sharing, an audit trail, electronic signature and search, and a front end that looked like the electronic counterpart to a paper notebook.Results: During the development of the beta version feedback was incorporated from many groups including the FDA's Center for Biologics Evaluation & Research, Uppsala University, Children's Hospital Boston, Alex Swarbrick's lab at the Garvan Institute in Sydney and Martin Spitaler at Imperial College. More than 100 individuals and groups worldwide then participated in the beta testing between September 2008 and June 2009. The generally positive response is reflected in the following quote about how one lab is making use of eCAT: \"Everyone uses it as an electronic notebook, so they can compile the diverse collections of data that we generate as biologists, such as images and spreadsheets. We use to it to take minutes of meetings. We also use it to manage our common stocks of antibodies, plasmids and so on. Finally, perhaps the most important feature for us is the ability to link records, reagents and experiments.\"Conclusion: By developing eCAT in close collaboration with lab scientists, Axiope has come up with a practical and easy-to-use product that meets the need of scientists to manage, store and share data online. eCAT is already being perceived as a product that labs can continue to use as their data management and sharing grows in scale and complexity.","PeriodicalId":88390,"journal":{"name":"Automated experimentation","volume":"1 1","pages":"4"},"PeriodicalIF":0.0,"publicationDate":"2009-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/1759-4499-1-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28872333","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 17

Welcome to Automated Experimentation: a new open access journal. 欢迎来到自动化实验:一个新的开放获取期刊。

Automated experimentation Pub Date : 2009-10-29 DOI: 10.1186/1759-4499-1-1

David Robertson, Siu-Wai Leung, Dietlind Gerloff

引用次数: 4

Head in the clouds: Re-imagining the experimental laboratory record for the web-based networked world. 头在云端:重新构想基于网络的网络世界的实验实验室记录。

Automated experimentation Pub Date : 2009-10-29 DOI: 10.1186/1759-4499-1-3

Cameron Neylon

{"title":"Head in the clouds: Re-imagining the experimental laboratory record for the web-based networked world.","authors":"Cameron Neylon","doi":"10.1186/1759-4499-1-3","DOIUrl":"https://doi.org/10.1186/1759-4499-1-3","url":null,"abstract":"The means we use to record the process of carrying out research remains tied to the concept of a paginated paper notebook despite the advances over the past decade in web based communication and publication tools. The development of these tools offers an opportunity to re-imagine what the laboratory record would look like if it were re-built in a web-native form. In this paper I describe a distributed approach to the laboratory record based which uses the most appropriate tool available to house and publish each specific object created during the research process, whether they be a physical sample, a digital data object, or the record of how one was created from another. I propose that the web-native laboratory record would act as a feed of relationships between these items. This approach can be seen as complementary to, rather than competitive with, integrative approaches that aim to aggregate relevant objects together to describe knowledge. The potential for the recent announcement of the Google Wave protocol to have a significant impact on realizing this vision is discussed along with the issues of security and provenance that are raised by such an approach.","PeriodicalId":88390,"journal":{"name":"Automated experimentation","volume":"1 ","pages":"3"},"PeriodicalIF":0.0,"publicationDate":"2009-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/1759-4499-1-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28667314","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 9

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