Biodiversitas Journal of Biological Diversity最新文献

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High-throughput analysis using 16S rRNA gene of bacterial communities present in selected bivalves and gastropods species from Bayug Island, Iligan City, Philippines 利用 16S rRNA 基因高通量分析菲律宾伊利甘市巴尤格岛部分双壳类和腹足类物种中的细菌群落
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-13 DOI: 10.13057/biodiv/d250150
Nitcel Aymie Albarido, S. Tabugo
{"title":"High-throughput analysis using 16S rRNA gene of bacterial communities present in selected bivalves and gastropods species from Bayug Island, Iligan City, Philippines","authors":"Nitcel Aymie Albarido, S. Tabugo","doi":"10.13057/biodiv/d250150","DOIUrl":"https://doi.org/10.13057/biodiv/d250150","url":null,"abstract":"Abstract. Albarido NA, Tabugo SR. 2024. High-throughput analysis using 16S rRNA gene of bacterial communities present in selected bivalves and gastropods species from Bayug Island, Iligan City, Philippines. Biodiversitas 25: 431-438. Seashells, which include bivalves and gastropods, have global recognition for their significant contributions to the economy, ecology, and medicine. They hold value as a food source and are highly regarded as effective biological indicators. The objective of this study is to identify the bacterial communities present in selected edible species of bivalves (Pinctada margaritifera Linnaeus, 1758 and Anadara granosa Linnaeus, 1758) and gastropods (Canarium urceus Linnaeus, 1758 and Conus stercusmuscarum Linnaeus, 1758), through high-throughput sequencing metabarcoding. Bacterial samples were collected via a swabbing technique on the surface and inside parts of selected mollusc species, which were then placed on sterilized seawater for DNA extraction. Genomic DNA was isolated from the samples, and the V3-V4 region of the 16S rRNA gene was amplified and sequenced using the Illumina MiSeq platform. Four amplicon libraries were generated, representing the two bivalve and two gastropod species in the study area. Data analysis was conducted using the Parallel Meta Suite software. Upon quality control and processing, 173,489 amplicon sequence variants (ASVs) were obtained. Within the bacterial community, the most abundant genera included Stenotrophomonas, Vibrio, Serratia, Photobacterium, and Shewanella. The assessment of alpha diversity, using the Shannon index, indicated a higher diversity in A. granosa. Furthermore, the analysis using the PICRUSt algorithm within the Parallel Meta Suite unveiled the involvement of specific bacteria found in the selected gastropod and bivalve species in various functions. These functions encompass protein production, xenobiotic metabolism, biodegradation, and other metabolism-related processes, supporting these organisms' ecological and physiological roles.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"22 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140457713","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Examining the effectiveness of bored pile coral for coral rehabilitation 研究钻孔桩珊瑚在珊瑚修复方面的效果
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-13 DOI: 10.13057/biodiv/d250117
Novita Permata Putri, Muhammad Rifat Muharam, Abdulrahman Ritonga, Corina Dewi Ruswanti, Dian Arthen, Munasik Munasik
{"title":"Examining the effectiveness of bored pile coral for coral rehabilitation","authors":"Novita Permata Putri, Muhammad Rifat Muharam, Abdulrahman Ritonga, Corina Dewi Ruswanti, Dian Arthen, Munasik Munasik","doi":"10.13057/biodiv/d250117","DOIUrl":"https://doi.org/10.13057/biodiv/d250117","url":null,"abstract":"Abstract. Putri NP, Muharam MR, Ritonga A, Ruswanti CD, Arthen D, Munasik. 2024. Examining the effectiveness of bored pile coral for coral rehabilitation. Biodiversitas 25: 153-161. Semut Island is located in Kiabu Village, Anambas Islands, Riau, Indonesia, and has suffered significant damage to its coral cover due to blast fishing. To address this issue, Anambas Foundation initiated a coral reef rehabilitation on Semut Island using a customized artificial reef called Bored Pile Coral (BPC), a cylindrical structure made of concrete hammered into the seabed. This research aims to examine the effectiveness of BPC by monitoring its performance. Therefore, from February 2022 to January 2023, 1,500 BPCs were deployed and attached with corals covering an area of 170 m2. We quantified five ecological indicators, i.e., coral cover, survival rate, recruitment, growth rates, and fish biomass. Results showed an increase in coral cover from 3.8% to 8%. The survival rate was 64%, and the mean monthly growth rates varied among three genera: Pocillopora sp. (0.235±0.02 month-1), Acropora sp. (0.22±0.03 month-1) and Porites sp. (0.08±0.02 month-1). The monthly mean fish biomass data showed the biomass was 427,25 Kg/Ha and increased 3,9 times since the beginning of the research. BPC's structure has been proven to act as stable media for hard corals, although the modification may be necessary to enhance structural complexity and suitability for carnivorous fish habitats.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"307 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140457537","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The diversity and distribution of residential termites in the Minahasa Raya Region, North Sulawesi Province, Indonesia 印度尼西亚北苏拉威西省米纳哈萨拉亚地区住宅白蚁的多样性和分布情况
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-13 DOI: 10.13057/biodiv/d250105
Jacklin Stella Salome Manoppo, Ramadhani Eka Putra, Rudi Dungani, Intan Ahmad
{"title":"The diversity and distribution of residential termites in the Minahasa Raya Region, North Sulawesi Province, Indonesia","authors":"Jacklin Stella Salome Manoppo, Ramadhani Eka Putra, Rudi Dungani, Intan Ahmad","doi":"10.13057/biodiv/d250105","DOIUrl":"https://doi.org/10.13057/biodiv/d250105","url":null,"abstract":"Abstract. Manoppo JSS, Putra RE, Dungani R, Ahmad I. 2024. The diversity and distribution of residential termites in the Minahasa Raya Region, North Sulawesi Province, Indonesia. Biodiversitas 25: 39-48. Termites are major pests in urban settings, particularly due to their preference for wood, despite its ecological importance leading to structural damage to buildings. Studies showed a gap in the North Sulawesi Region, Indonesia, particularly in termite distribution, control, and economic impact in residential zones. This study aimed to (i) gather preliminary data on termite species in Minahasa and North Sulawesi from the literature; (ii) locate termite colonies via house/building surveys and baiting; (iii) map the distribution of identified termite species by Geographical Information System (GIS); and (iv) record environmental characteristics relevant to termite distribution and related damages. The study revealed a diversity of residential termite species in terms of morphological characteristics and habitats. Three termite families were identified: Rhinotermitidae, Termitidae, and Kalotermitidae, encompassing five sub-families and six genera, with the most notable species being Cryptotermes brevis Walker 1853, Odontotermes javanicus Holmgren, 1912, and Nasutitermes atripennis Haviland, 1898 among others. The Cryptotermes and Odontotermes were the most commonly encountered genera in Minahasa Raya's residential areas.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"384 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140457817","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of local pigs for economic and socio-cultural in East Flores District, East Nusa Tenggara, Indonesia 印度尼西亚东努沙登加拉省东弗洛里斯区当地猪在经济和社会文化方面的作用
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-13 DOI: 10.13057/biodiv/d250124
A. S. Keray, R. Widiati, T. A. Kusumastuti
{"title":"The role of local pigs for economic and socio-cultural in East Flores District, East Nusa Tenggara, Indonesia","authors":"A. S. Keray, R. Widiati, T. A. Kusumastuti","doi":"10.13057/biodiv/d250124","DOIUrl":"https://doi.org/10.13057/biodiv/d250124","url":null,"abstract":"Abstract. Keray AS, Widiati R, Kusumastuti TA. 2024. The role of local pigs for economic and socio-cultural in East Flores District, East Nusa Tenggara, Indonesia. Biodiversitas 25: 214-222. This study was conducted to identify the cultural activities related to swine rearing in East Flores District and analyze the decision making in choosing the types of rearing practice. Based on the survey using questionnaires from 120 pig farmers, which was conducted purposive, were those who had at least three sows for breeding, fattening with five heads of pigs, and combined with sows and sires. To identify the role of local pigs, as many as 3 informants consist of traditional leaders, farmers, and Agriculture Extension Officers, and analyzed by multinomial logistic regression model. The results showed that the traditional rituals that required the sacrifice of pigs included the ceremonies marking the start of building residential and traditional community buildings and dowry (belis)  presentation in a wedding ceremony. The decision-making in choosing the rearing practice was influenced by pig ownership, care system (P<0.01), and income (P<0.05). Farmers who have small scale will choose extensive and fattening systems to reduce feed costs. Those practicing breeding are still maintaining local breeds because traditional rituals require it. Further efforts are needed to increase the populations of local breeds as well as cross-bred pigs to maintain the ceremonies in traditional rituals and income generation.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"254 15","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140457833","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phytochemical analysis and antioxidant activities ethanol extract of propolis Trigona spp. from different vegetation in Lombok, West Nusa Tenggara, Indonesia 印度尼西亚西努沙登加拉龙目岛不同植被中蜂胶Trigona属植物的植物化学分析和抗氧化活性乙醇提取物
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-11 DOI: 10.13057/biodiv/d250147
K. Tirtasari, L. T. Suwanti, M. Mufasirin, P. Hastutiek, Elly Nur Indasari, R. Kurnijasanti, H. Plumeriastuti, Erma Safitri, E. Hestianah
{"title":"Phytochemical analysis and antioxidant activities ethanol extract of propolis Trigona spp. from different vegetation in Lombok, West Nusa Tenggara, Indonesia","authors":"K. Tirtasari, L. T. Suwanti, M. Mufasirin, P. Hastutiek, Elly Nur Indasari, R. Kurnijasanti, H. Plumeriastuti, Erma Safitri, E. Hestianah","doi":"10.13057/biodiv/d250147","DOIUrl":"https://doi.org/10.13057/biodiv/d250147","url":null,"abstract":"Abstract. Tirtasari K, Suwanti LT, Mufasirin, Hastutiek P, Indasari EN, Kurnijasanti R, Plumeriastuti H, Safitri E, Hestianah EP. 2024. Phytochemical analysis and antioxidant activities ethanol extract of propolis Trigona spp. from different vegetation in Lombok, West Nusa Tenggara, Indonesia. Biodiversitas 25: 404-411. Propolis is a natural substance containing a resin that is collected by honey bees from various plants and has a significant effect on human health such as antibacterial, antifungal, anti-inflammatory, antiviral, anesthetic, antioxidant, antitumoural, antiprotozoal, anticancer, antihypertensive, anticarcinogenic, antihepatotoxic and has cytotoxic activity. Cultivation of Trigona spp. in Lombok is growing rapidly. Trigona spp. produces more propolis than honey bees of Apis spp., but bee products that are maximally utilized are only honey, and propolis has not been utilized optimally. Currently, there is no scientific validation of the phytochemical content, bioactive compounds, and biological activities of ethanol extract propolis Trigona spp. from Lombok, West Nusa Tenggara. So, this study aimed to determine the phytochemical compounds, bioactive compounds, and antioxidant activity of propolis. Gas Chromatography-Mass Spectrometry (GC-MS) analysis was performed to determine the bioactive compounds of ethanol extract propolis. DPPH (2,2-diphenyl-1-picrylhydrazyl) was used to evaluate antioxidant activity. The composition of propolis compounds is different for each propolis depending on the bee species and the vegetation source from which the resin was collected. In this research, propolis was collected from different vegetation sources (cashews, moringa, coffee, and lote trees). This study used qualitative and quantitative phytochemical analysis and the antioxidant DPPH test. Different components and percentages cause significant variations in the results obtained from phytochemical tests. The content is different in various propolis, there are saponins, flavonoids, and tannins. The highest antioxidant activity was found in propolis with moringa resin 38.4150 (very strong), followed by lote tree resin -66.0420 (strong), cashew resin 81.8140 (strong), and coffee resin 100.7465 (moderate).","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"5 3","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140458943","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cryptic diversity of mudskipper genus Boleophthalmus (Gobiiformes: Oxudercidae) from the north coast of East Java, Indonesia 印度尼西亚东爪哇岛北海岸弹涂鱼属(戈壁形目:弹涂鱼科)的隐秘多样性
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-11 DOI: 10.13057/biodiv/d250148
Faizah Nur Shabrina, Kunto Wibowo, Tuty Arisuryanti
{"title":"Cryptic diversity of mudskipper genus Boleophthalmus (Gobiiformes: Oxudercidae) from the north coast of East Java, Indonesia","authors":"Faizah Nur Shabrina, Kunto Wibowo, Tuty Arisuryanti","doi":"10.13057/biodiv/d250148","DOIUrl":"https://doi.org/10.13057/biodiv/d250148","url":null,"abstract":"Abstract. Shabrina FN, Wibowo K, Arisuryanti T. 2024. Cryptic diversity of mudskipper genus Boleophthalmus (Gobiiformes: Oxudercidae) from the north coast of East Java, Indonesia. Biodiversitas 25: 412-420. Mudskippers of genus Boleophthalmus are commonly found in the Indo-Pacific area. This study aimed to examine the diversity of the genus Boleophthalmus from the north coast of East Java Province, Indonesia by employing the mitochondrial COI gene for DNA barcoding and morphological characterization. Ten individuals of this genus were analyzed. According to the similarity percentage evaluated using Basic Local Alignment Search Tool (BLAST) and Barcode of Life Data (BOLD) identification engines, all the individuals were identified as Boleophthalmus boddarti Pallas, 1770. However, phylogenetic analysis revealed that three of the individuals were identified as B. boddarti, and seven were identified as Boleophthalmus pectinirostris Linnaeus, 1758 originated from East Java, which is separated from the clade of B. pectinirostris from East Asia population. These results were supported by the genetic distance of 8.93%-13.81% and the morphological characteristics determined by principal component analysis (PCA). PCA revealed that B. boddarti and B. pectinirostris are primarily distinguished by the number of (longitudinal) scales (69-75 versus 113-123), length of second dorsal fin base (42.3-43.9 versus 38.1-49.0), and caudal fin length (18.1-22.4 versus 17.5-21.6). Further detailed studies are needed to clarify whether the seven individuals belonging to B. pectinirostris complex should be regarded as a new species or a new subspecies.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"11 17","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140458889","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biodiversity of hydrolytic enzymes-producing soil bacteria from a Durian Park, Jombang, Indonesia: Beneficial prospect for sustainable agriculture 印度尼西亚裕廊榴莲园中产生水解酶的土壤细菌的生物多样性:可持续农业的有益前景
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-11 DOI: 10.13057/biodiv/d250146
Ni’matuzahroh Ni’matuzahroh, M. Affandi, Agus Supriyanto, Berlian Rustantina, Laily Ainun Jaiyah, Aisyah Rahmawati, Hesti Nurhayati, S. K. Sari, A. M. Khiftiyah, Daman Huri
{"title":"Biodiversity of hydrolytic enzymes-producing soil bacteria from a Durian Park, Jombang, Indonesia: Beneficial prospect for sustainable agriculture","authors":"Ni’matuzahroh Ni’matuzahroh, M. Affandi, Agus Supriyanto, Berlian Rustantina, Laily Ainun Jaiyah, Aisyah Rahmawati, Hesti Nurhayati, S. K. Sari, A. M. Khiftiyah, Daman Huri","doi":"10.13057/biodiv/d250146","DOIUrl":"https://doi.org/10.13057/biodiv/d250146","url":null,"abstract":"Abstract. Ni’matuzahroh, Affandi M, Supriyanto A, Rustantina B, Jaiyah LA, Rahmawati A, Nurhayati H, Sari SK, Khiftiyah AM, Huri D. 2024. Biodiversity of hydrolytic enzymes-producing soil bacteria from a Durian Park, Jombang, Indonesia: Beneficial prospect for sustainable agriculture. Biodiversitas 25: 392-403. Biofertilizer is an alternative to chemical fertilizer that can enhance plant growth but is specific to certain plants and soils. Various biofertilizers have been produced, but the specific biofertilizers to enhance durian growth have not been widely available. This study aims to determine the potential of hydrolytic enzyme-producing bacteria, one of the microbial components of biofertilizers, in the De Durian Park (DDP) area, Wonosalam, Jombang District, Indonesia. The bacteria were isolated using the selective medium plating technique. The obtained isolates were screened for their ability to produce cellulase, amylase, protease, and lipase. The clear zone around the colony indicated the ability of the isolates to produce hydrolytic enzymes, and then the clear zone index was obtained. The best three isolates for each enzyme production were characterized macroscopically, microscopically, and biochemically, then identified using 16S rRNA gene sequence analysis. Fifty-two isolates were successfully obtained from the soil of DDP. The best three cellulolytic bacteria had indices ranging from 1.83 to 2.14, categorized as moderate-strong, identified as Bacillus anthracis, B. pacificus, and B. cereus. The amylolytic bacteria ranged from 1.25 to 1.35, categorized as moderate, and identified as Bacillus anthracis, B. paranthracis, and B. paramycoides. The proteolytic bacteria ranged from 1.33 to 1.50, categorized as moderate, identified as B. pumilus, B. paramycoides, and B. cereus. The lipolytic bacteria ranged from 1.94 to 3.87, categorized as moderate-strong, and were identified as Enterobacter sichuanensis, B. pacificus, and E. asburiae. These cellulolytic, amylolytic, proteolytic, and lipolytic bacteria have the potency as candidates for a biofertilizer formula.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"18 3","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140459024","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic variation of the native Rusa deer (Rusa timorensis) in Java and Bali (Indonesia) as revealed using non-invasive sampling 利用非入侵性采样揭示的爪哇和巴厘岛(印度尼西亚)本地鲁沙鹿(Rusa timorensis)的基因变异
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-10 DOI: 10.13057/biodiv/d250141
M. H. Iman, P. C. Kuswandi, S. Subrata
{"title":"Genetic variation of the native Rusa deer (Rusa timorensis) in Java and Bali (Indonesia) as revealed using non-invasive sampling","authors":"M. H. Iman, P. C. Kuswandi, S. Subrata","doi":"10.13057/biodiv/d250141","DOIUrl":"https://doi.org/10.13057/biodiv/d250141","url":null,"abstract":"Abstract. Iman MH, Kuswandi PC, Subrata SA. 2024. Genetic variation of the native Rusa deer (Rusa timorensis) in Java and Bali (Indonesia) as revealed using non-invasive sampling. Biodiversitas 25: 355-360. Rusa deer is a vulnerable species with a large geographic range but natively inhabits Java and Bali. Despite the wide distribution, its native population is declining, raising a concern about a small population's adverse genetic effect. It encourages genetic studies to provide baseline data that has been vacant recently. This research aimed to demonstrate an application of non-invasive sampling to collect DNA samples and a simple procedure to obtain and analyze genetic data for the Rusa deer. This research also aimed to provide genetic variation of the native deer population as baseline data. The research sites were Baluran, Alas Purwo in East Java, and Bali Barat national parks from which fecal samples were collected. Moreover, 20 DNA samples were isolated from the feces using a kit (Dneasy PowerSoil Pro from Qiagen) and amplified at the control region gene using a forward: AAACCAGAAAAGGAGAGCAAC and a reverse: TCATCTAGGCATTTTCAGTGCC primer. The amplicons were sequenced, and the number of Haplotypes (Hn), Haplotype diversity (Hd), nucleotide diversity (p), site polymorphism, and phylogeographic tree were determined. The result showed that all the sequences had coverage of 100% and identity >98% with the Rusa timorensis sequence available in the GenBank. Furthermore, we found Hn = 11, Hd = 0.88, p = 0.005 and 30 site polymorphisms. Therefore, compared to an introduced population, the Rusa deer has a richer Hd and higher site polymorphism but a poorer p. Furthermore, we found that the Baluran population had high Hd, p, and is possibly forming a distinct clade.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"84 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140459072","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
In vitro screening of fungal endophytes from sandalwood (Santalum album) as antagonists to phytopathogens 体外筛选作为植物病原体拮抗剂的檀香内生真菌
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-10 DOI: 10.13057/biodiv/d250142
A. V. Simamora, M. V. Hahuly, P. Nenotek, Y. R. Kana, M. Kasim, Roddialek Pollo, Antonius R. B. Ola, Fadlan Pramatana
{"title":"In vitro screening of fungal endophytes from sandalwood (Santalum album) as antagonists to phytopathogens","authors":"A. V. Simamora, M. V. Hahuly, P. Nenotek, Y. R. Kana, M. Kasim, Roddialek Pollo, Antonius R. B. Ola, Fadlan Pramatana","doi":"10.13057/biodiv/d250142","DOIUrl":"https://doi.org/10.13057/biodiv/d250142","url":null,"abstract":"Abstract. Simamora AV, Hahuly MV, Nenotek PS, Kana YR, Kasim M, Pollo R, Ola AR, Pramatana F. 2024. In vitro screening of fungal endophytes from sandalwood (Santalum album) as antagonists to phytopathogens. Biodiversitas 25: 361-371. Endophytic fungi possess bioactive compounds and generate secondary metabolites like their host plants. The phytochemical compounds found in sandalwood plants (Santalum album L.) are recognized for their anti-pathogenic properties, suggesting the potential of sandalwood endophytic fungi as effective anti-phytopathogens. Alternaria solani and Fusarium oxysporum threaten tomato plants, whereas Phytophthora palmivora is particularly detrimental to cocoa plants. The aims of this study were: (i) to obtain isolates of endophytic fungi from roots, stems, and leaves of sandalwood plants and (ii) to assess the ability of endophytic fungi as anti-phytopathogens in vitro. Endophytic fungi were isolated through a direct plating method and next by purification and identification. All obtained endophytic fungi underwent testing for their antagonistic potential against A. solani, F. oxysporum, and P. palmivora in vitro through the dual culture method. The inhibition percentage was analyzed using variance analysis and further examined with the 5% HSD test. The study successfully isolated 104 endophytic fungal isolates from the sandalwood; 29 isolates were from the roots, 33 from the stems, and 42 from the leaves. All endophytic isolates demonstrated the ability to inhibit the growth of A. solani, F. oxysporum, and P. palmivora in vitro, with various inhibition percentages ranging from 26.7 to 83.3%. Further research will concentrate on secondary metabolites from selected isolates showing inhibition levels exceeding 70%.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"149 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140459099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Selection for representative environment to identify high yielding and sweetness levels of sweet potato (Ipomoea batatas L.) in Indonesia 选育代表性环境,确定印度尼西亚甘薯(Ipomoea batatas L.)的高产和甜度水平
Biodiversitas Journal of Biological Diversity Pub Date : 2024-02-09 DOI: 10.13057/biodiv/d250145
E. Solihin, D. A. Santosa, Budi Nugroho, P. Purwono, Rija Sudirja, H. Maulana, N. Kamaluddin, A. Karuniawan, Syaiful Anwar
{"title":"Selection for representative environment to identify high yielding and sweetness levels of sweet potato (Ipomoea batatas L.) in Indonesia","authors":"E. Solihin, D. A. Santosa, Budi Nugroho, P. Purwono, Rija Sudirja, H. Maulana, N. Kamaluddin, A. Karuniawan, Syaiful Anwar","doi":"10.13057/biodiv/d250145","DOIUrl":"https://doi.org/10.13057/biodiv/d250145","url":null,"abstract":"Abstract. Solihin E, Santosa DA, Nugroho B, Purwono, Sudirja R, Maulana H, Kamaluddin NN, Karuniawan A, Anwar S. 2024. Selection for representative environment to identify high yield and sweetness levels of sweet potato (Ipomoea batatas) in Indonesia. Biodiversitas 25: 386-391. Sweet potato is one of the important and commercial agricultural commodities in the world. Yield and sweetness levels are important traits that can influence consumer preferences. Environment is an important factor in the development of sweet potatoes. A suitable environment will provide high yields and good quality. The objectives of this study were to examine the significance and relevance of sweet potato yield and sweetness levels in two locations (Sumedang and Bandung District) and to select representative environments for sweet potato yield and sweetness levels. The research was conducted in Sumedang and Bandung districts on lowland paddy field and dry land. The field experiment used a factorial randomized completed block design with three repetitions. The significance and relevance of sweet potato yield and sweetness levels was analysis using T-test. Representative environments were identified by GGE biplot. The results showed that the Bandung and Sumedang environments showed significant differences in yield but not in sweetness. The Bandung paddy field is the most representative environment for yield, while the Sumedang dry field and Bandung dry field are the most representative environments for sweetness. The results of this research can be used by researchers, farmers and industrial users in the sweet potato development program, especially the yield and yield quality.","PeriodicalId":8801,"journal":{"name":"Biodiversitas Journal of Biological Diversity","volume":"127 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140459141","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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