{"title":"Synthesis, crystal structure and properties of catena-poly[[bis(4-methylpyridine-κN)cobalt(II)]-di-μ-thiocyanato-κ2N:S;κ2S:N], which shows a rare coordination geometry","authors":"Christian Näther , Jan Boeckmann","doi":"10.1107/S2056989024012003","DOIUrl":"10.1107/S2056989024012003","url":null,"abstract":"<div><div>In the crystal structure of the title compound, Co(NCS)<sub>2</sub>(C<sub>6</sub>H<sub>7</sub>N)<sub>2</sub> (C<sub>6</sub>H<sub>7</sub>N = 4-methylpyridine), the Co<sup>II</sup> cations are in an alternating octahedral all-<em>trans</em> and <em>cis</em>-<em>cis</em>-<em>trans</em> coordination and linked into corrugated chains by pairs of μ-1,3 bridging thiocyanate anions.</div></div><div><div>Reaction of Co(NCS)<sub>2</sub> with 4-methylpyridine in water leads to the formation of single crystals of the title compound, [Co(NCS)<sub>2</sub>(C<sub>6</sub>H<sub>7</sub>N)<sub>2</sub>]<sub><em>n</em></sub>. The asymmetric unit consists of two crystallographically independent thiocyanate anions and two crystallographically independent 4-methylpyridine coligands in general positions, as well as of two different Co<sup>II</sup> cations, of which one is located on a twofold rotational axis, whereas the second occupies a center of inversion. The methyl H atoms in both 4-methylpyridine ligands are disordered and were refined using a split model. Both Co<sup>II</sup> cations are octahedrally coordinated by two N- and two S-bonded thiocyanate anions and two 4-methylpyridine coligands and are linked by pairs of 1,3-bridging anionic ligands into chains. Within these chains the cations show an alternating all-<em>trans</em> and <em>cis</em>–<em>cis</em>–<em>trans</em> configuration, which leads to the formation of corrugated chains. Powder X-ray diffraction proves that a pure crystalline phase has been obtained and the values of the CN stretching vibrations of the anionic ligands observed in the IR and the Raman spectra are in agreement with the presence of bridging anionic ligands.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"81 1","pages":"Pages 58-62"},"PeriodicalIF":0.5,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11701768/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142942525","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Atash V. Gurbanov , Tuncer Hökelek , Gunay Z. Mammadova , Khudayar I. Hasanov , Tahir A. Javadzade , Alebel N. Belay
{"title":"Crystal structure and Hirshfeld surface analysis of supramolecular aggregate of 2,2,6,6-tetramethylpiperidin-1-ium bromide with 1,2,3,4-tetrafluoro-5,6-diiodobenzene","authors":"Atash V. Gurbanov , Tuncer Hökelek , Gunay Z. Mammadova , Khudayar I. Hasanov , Tahir A. Javadzade , Alebel N. Belay","doi":"10.1107/S2056989024011502","DOIUrl":"10.1107/S2056989024011502","url":null,"abstract":"<div><div>The asymmetric unit of the title compound contains one 2,2,6,6 tetramethylpiperidine-1-ium cation, one 1,2,3,4-tetrafluoro-5,6-diiodobenzene molecule, and one uncoordinated bromide anion. In the crystal, the bromide anions link the 2,2,6,6-tetramethylpiperidine molecules by intermolecular C—H⋯Br and N—H⋯Br hydrogen bonds, leading to dimers, with the coplanar 1,2,3,4-tetrafluoro-5, 6-diiodobenzene molecules filling the space between them.</div></div><div><div>The asymmetric unit of the title compound, C<sub>9</sub>H<sub>20</sub>N<sup>+</sup>·Br<sup>−</sup>·C<sub>6</sub>F<sub>4</sub>I<sub>2</sub>, contains one 2,2,6,6 tetramethylpiperidine-1-ium cation, one 1,2,3,4-tetrafluoro-5,6-diiodobenzene molecule, and one uncoordinated bromide anion. In the crystal, the bromide anions link the 2,2,6,6-tetramethylpiperidine molecules by intermolecular C—H⋯Br and N—H⋯Br hydrogen bonds, leading to dimers, with the coplanar 1,2,3,4-tetrafluoro-5,6-diiodobenzene molecules filling the space between them. There is a π–π interaction between the almost parallel benzene rings [dihedral angle = 10.5 (2)°] with a centroid-to-centroid distance of 3.838 (3) Å and slippage of 1.468 Å. No C—H⋯π(ring) interactions are observed. A Hirshfeld surface analysis indicates that the most important contributions for the crystal packing are from H⋯F/F⋯H (23.8%), H⋯H (22.6%), H⋯Br/Br⋯H (17.3%) and H⋯I/I⋯H (13.8%) interactions. Hydrogen bonding and van der Waals interactions are the dominant interactions in the crystal packing.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"81 1","pages":"Pages 53-57"},"PeriodicalIF":0.5,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11701772/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142942493","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Crystal structure of AlPCl8","authors":"Hyeonjin Seo , Seungyong Shin , Seung-Tae Hong","doi":"10.1107/S2056989024010661","DOIUrl":"10.1107/S2056989024010661","url":null,"abstract":"<div><div>The crystal structure of aluminium phosphorus chloride was determined and refined using single-crystal X-ray diffraction data. The compound crystallizes in the orthorhombic space group <em>Pbcm</em> with the asymmetric unit comprises one Al atom, one P atom, and five Cl atoms. The structure is characterized by isolated AlCl<sub>4</sub> and PCl<sub>4</sub> tetrahedra, isostructural with FePCl<sub>8</sub> and GaPCl<sub>8</sub>.</div></div><div><div>The crystal structure of aluminium phosphorus chloride (systematic name: phosphorus tetrachloride tetrachloridoaluminate), (PCl<sub>4</sub>)[AlCl<sub>4</sub>] or AlPCl<sub>8</sub>, was determined and refined using single-crystal X-ray diffraction data. The compound crystallizes in the orthorhombic space group <em>Pbcm</em>. The asymmetric unit comprises one Al atom, one P atom, and five Cl atoms. The structure is characterized by isolated AlCl<sub>4</sub> and PCl<sub>4</sub> tetrahedra, isostructural with FePCl<sub>8</sub> and GaPCl<sub>8</sub>.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1280-1282"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129412","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Vinaya , Syida A. Yakuth , Thaluru M. Mohan Kumar , Besagarahally L. Bhaskar , Thayamma R. Divakara , Hemmige S. Yathirajan , Yeriyur B. Basavaraju , Sean Parkin
{"title":"Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K","authors":"Vinaya , Syida A. Yakuth , Thaluru M. Mohan Kumar , Besagarahally L. Bhaskar , Thayamma R. Divakara , Hemmige S. Yathirajan , Yeriyur B. Basavaraju , Sean Parkin","doi":"10.1107/S205698902401140X","DOIUrl":"10.1107/S205698902401140X","url":null,"abstract":"<div><div>The synthesis, crystal structure, and a Hirshfeld surface analysis of 5-methyl-1<em>H</em>-pyrazol-3-yl 4-nitrobenzenesulfonate (C<sub>10</sub>H<sub>9</sub>N<sub>3</sub>O<sub>5</sub>S), a bioactive compound with pharmacological potential are presented.</div></div><div><div>This study presents the synthesis, crystal structure, and a Hirshfeld-surface analysis of the bioactive compound 5-methyl-1<em>H</em>-pyrazol-3-yl 4-nitrobenzenesulfonate(C<sub>10</sub>H<sub>9</sub>N<sub>3</sub>O<sub>5</sub>S), a pyrazole derivative with pharmacological potential. Pyrazoles are known for diverse bioactivities, and recent research emphasizes their role as a ‘privileged structure’ in drug design. Here, the asymmetric unit of the title compound contains two distinct molecules, <em>A</em> and <em>B</em>, exhibiting differences in conformation resulting from variation in key torsion angles. These distinctions influence the molecular orientation and intermolecular interactions, with strong N—H⋯N and N—H⋯O hydrogen bonds forming a centrosymmetric tetramer stabilized by π–π stacking. Hirshfeld surface analysis readily confirms differing intermolecular contacts for <em>A</em> and <em>B</em>, primarily involving hydrogen atoms and differences in their close contacts to nitrogen and oxygen. This study offers further insight into the molecular architecture and potential interactions of pyrazole-based drug candidates.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1354-1358"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Intra- and intermolecular C—H⋯F hydrogen bonds in the crystal structure of 1,2-bis[2-(2,3,4,5-tetrafluorophenyl)ethynyl]benzene","authors":"Eric Bosch , Nathan P. Bowling","doi":"10.1107/S2056989024010995","DOIUrl":"10.1107/S2056989024010995","url":null,"abstract":"<div><div>The structure of the aryl ethynylene molecule, 1,2-<em>bis</em>-(2,3,4,5-tetrafluorophenylethynyl) benzene includes two unique molecules in the unit cell. Both feature intramolecular <em>sp</em><sup>2</sup>-C—H⋯F hydrogen bonds in addition to intermolecular C—H⋯F hydrogen bonds.</div></div><div><div>The title molecule, C<sub>22</sub>H<sub>6</sub>F<sub>8</sub>, crystallizes in the monoclinic space group <em>P</em>2<sub>1</sub>/<em>c</em> with two unique molecules in the asymmetric unit and <em>Z</em> = 8. Each molecule features a short intramolecular <em>sp</em><sup>2</sup>-C—H⋯F hydrogen bond with H⋯F separations at 2.363 (14) and 2.270 (14) Å, corresponding to 91 and 87.5% of the sum of the van der Waals radii, and C—H⋯F angles of 158.3 (14) and 166.8 (14)°, respectively. Each molecule also forms an intermolecular bifurcated CH⋯(F)<sub>2</sub> interaction with H⋯F distances ranging from 2.500 (16) to 2.597 (17) Å.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1298-1301"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129256","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The cadmium oxidotellurates(IV) Cd5(TeO3)4(NO3)2 and Cd4Te5O14","authors":"Felix Eder , Matthias Weil","doi":"10.1107/S2056989024010387","DOIUrl":"10.1107/S2056989024010387","url":null,"abstract":"<div><div>The crystal structure of Cd<sub>5</sub>(TeO<sub>3</sub>)<sub>4</sub>(NO<sub>3</sub>)<sub>2</sub> exhibits a distinct layered arrangement, whereas Cd<sub>4</sub>Te<sub>5</sub>O<sub>14</sub> crystallizes with a framework structure.</div></div><div><div>Monoclinic single crystals of Cd<sub>5</sub>(TeO<sub>3</sub>)<sub>4</sub>(NO<sub>3</sub>)<sub>2</sub> (space group <em>P</em>2<sub>1</sub>/<em>c</em>), pentacadmium tetrakis[oxidotellurate(IV)] dinitrate, and of Cd<sub>4</sub>Te<sub>5</sub>O<sub>14</sub> (space group <em>C</em>2/<em>c</em>), tetracadmium pentaoxidotellurate(IV), were obtained under the same hydrothermal conditions. Whereas the crystal structure of Cd<sub>5</sub>(TeO<sub>3</sub>)<sub>4</sub>(NO<sub>3</sub>)<sub>2</sub> is distinctively layered, that of Cd<sub>4</sub>Te<sub>5</sub>O<sub>14</sub> exhibits a tri-periodic framework. In Cd<sub>5</sub>(TeO<sub>3</sub>)<sub>4</sub>(NO<sub>3</sub>)<sub>2</sub>, the three Cd<sup>II</sup> atoms have coordination numbers (CN) of 7, 6 and 6. The two types of [CdO<sub>6</sub>] and the [CdO<sub>7</sub>] polyhedra [bond lengths range from 2.179 (3) to 2.658 (2) Å] share corners and edges, resulting in layers extending parallel to (100). Both Te<sup>IV</sup> atoms are coordinated by three oxygen atoms in a trigonal–pyramidal shape. The oxygen atoms of the isolated [TeO<sub>3</sub>] groups [bond lengths range from 1.847 (3) to 1.886 (3) Å] all are part of the cadmium–oxygen layer. The electron lone pairs ψ of the Te<sup>IV</sup> atoms are directed away from the layer on both sides. The available interlayer space is co-occupied by the nitrate group, which is directly connected with two of its O atoms to the layer whereas the third O atom is solely bonded to the N atom and points towards the adjacent layer. In Cd<sub>4</sub>Te<sub>5</sub>O<sub>14</sub>, all three unique Cd<sup>II</sup> atoms are coordinated by six oxygen atoms, considering Cd—O distances from 2.235 (2) to 2.539 (2) Å. By edge- and corner-sharing, the distorted [CdO<sub>6</sub>] polyhedra form an open framework that is partially filled with three different stereochemically active Te<sup>IV</sup> atoms. All of them exhibit a CN of 4, with Te—O bonds in a range from 1.859 (2) to 2.476 (2) Å. The corresponding [TeO<sub>4</sub>] units are linked to each other by corner- and edge-sharing, forming infinite helical <sup>1</sup><sub>∞</sub>[Te<sub>10</sub>O<sub>28</sub>] chains extending parallel to [203]. The connectivity in the chains can be described as (⋯–⋄–⋄=⋄–⋄–⋄–⋄–⋄=⋄–⋄–⋄–⋯)<sub><em>n</em></sub> where ‘⋄’ denotes a [TeO<sub>4</sub>] unit, ‘–’ a linkage <em>via</em> corners and ‘=’ a linkage <em>via</em> edges. Such a structural motif is unprecedented in the crystal chemistry of oxidotellurate(IV) compounds.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1244-1249"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129258","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Crystal structure of a solvated dinuclear CuII complex derived from 3,3,3′,3′-tetraethyl-1,1′-(furan-2,5-dicarbonyl)bis(thiourea)","authors":"Canh Dinh Le , Hoang Phuc Nguyen , Chien Thang Pham","doi":"10.1107/S2056989024010703","DOIUrl":"10.1107/S2056989024010703","url":null,"abstract":"<div><div>In the title compound, [Cu<sub>2</sub>(<em>L</em>)<sub>2</sub>]·2CH<sub>2</sub>Cl<sub>2</sub>, the Cu<sup>II</sup> ions coordinate two (<em>S</em>,<em>O</em>)-chelating aroylthiourea moieties of doubly deprotonated furan-2,5-dicarbonylbis(<em>N</em>,<em>N</em>-diethylthiourea) (<strong>H<sub>2</sub>L</strong>) ligands. The coordination geometry of the metal centers is best described as a flat isosceles trapezoid with a <em>cis</em> arrangement of the donor atoms.</div></div><div><div>Reaction between equimolar amounts of 3,3,3′,3′-tetraethyl-1,1′-(furan-2,5-dicarbonyl)bis(thiourea) (<strong>H<sub>2</sub>L</strong>) and CuCl<sub>2</sub>·2H<sub>2</sub>O in methanol in the presence of the supporting base Et<sub>3</sub>N gave rise to a neutral dinuclear complex bis[μ-3,3,3′,3′-tetraethyl-1,1′-(furan-2,5-dicarbonyl)bis(thioureato)]dicopper(II) dichloromethane disolvate, [Cu<sub>2</sub>(C<sub>16</sub>H<sub>22</sub>N<sub>4</sub>O<sub>3</sub>S<sub>2</sub>)<sub>2</sub>]·2CH<sub>2</sub>Cl<sub>2</sub> or [Cu<sub>2</sub>(<em>L</em>)<sub>2</sub>]·2CH<sub>2</sub>Cl<sub>2</sub>. The aroylbis(thioureas) are doubly deprotonated and the resulting anions {<em>L</em><sup>2–</sup>} bond to metal ions through (<em>S</em>,<em>O</em>)-chelating moieties. The copper atoms adopt a virtually <em>cis</em>-square-planar environment. In the crystal, adjacent [Cu<sub>2</sub>(<em>L</em>)<sub>2</sub>]·2CH<sub>2</sub>Cl<sub>2</sub> units are linked into polymeric chains along the <em>a-</em>axis direction by intermolecular coordinative Cu⋯S interactions. The co-crystallized solvent molecules play a vital role in the crystal packing. In particular, weak C—H<sub>furan</sub>⋯Cl and C—H<sub>ethyl</sub>⋯Cl contacts consolidate the three-dimensional supramolecular architecture.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1266-1269"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129709","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Comprehensive structural study of lanthanide(III) chloride hydrates: [RECl3·xH2O (RE = La–Nd, Sm–Lu; x = 6, 7)]","authors":"Thimira Kandabadage , Beau Legnon , Sviatoslav Baranets","doi":"10.1107/S2056989024011319","DOIUrl":"10.1107/S2056989024011319","url":null,"abstract":"<div><div>This study presents a comprehensive crystallographic analysis of the lanthanide(III) chloride hydrates [<em>RE</em>Cl<sub>3</sub>·xH<sub>2</sub>O (<em>RE</em> = La–Nd, Sm–Lu; <em>x</em> = 6, 7)], offering new structural data for the series. The research highlights the influence of hydration levels and lanthanide contraction on the crystal structures, while identifying missing data for specific hydrates in existing structural databases.</div></div><div><div>A comprehensive crystallographic study is presented of the complete series of rare-earth(III) chloride hydrates. Early lanthanides form dimeric [(H<sub>2</sub>O)<sub>7</sub><em>RE</em>(μ-Cl)<sub>2</sub><em>RE</em>(H<sub>2</sub>O)<sub>7</sub>]<sup>4+</sup> binuclear complexes in which each <em>RE</em> atom (<em>RE</em> = La<sup>3+</sup>, Ce<sup>3+</sup>) is coordinated by seven H<sub>2</sub>O molecules and two bridging inner-sphere chloride ions. Di-μ-chlorido-bis[heptaaqualanthanide(III)] tetrachloride, [(H<sub>2</sub>O)<sub>7</sub><em>RE</em>(μ-Cl)<sub>2</sub><em>RE</em>(H<sub>2</sub>O)<sub>7</sub>]Cl<sub>4</sub>, crystallizes in the triclinic space group <em>P</em>1. Heavier lanthanides exhibit monomeric [<em>RE</em>Cl<sub>2</sub>(H<sub>2</sub>O)<sub>6</sub>]<sup>+</sup> units where each <em>RE</em> atom (<em>RE</em> = Pr<sup>3+</sup>, Nd<sup>3+</sup>, Sm<sup>3+</sup>–Lu<sup>3+</sup>) is coordinated by six H<sub>2</sub>O molecules and two inner-sphere chloride ions. Hexaaquadichloridolanthanide(III) chlorides, [<em>RE</em>Cl<sub>2</sub>(H<sub>2</sub>O)<sub>6</sub>]Cl, adopt the monoclinic space group <em>P</em>2/<em>c.</em> In both structures, the cationic <em>inner-sphere</em> complex is counter-charged by the corresponding number of <em>outer-sphere</em> Cl<sup>−</sup> anions, in which the metal ion and outer-sphere chloride ion lie on crystallographic twofold axes. Crystal structures for all compounds were determined in high quality with refined H-atom positions and were collected at the same temperature (100 K), providing a uniform structural dataset and addressing discrepancies in previous reports. The crystal structure of [HoCl<sub>2</sub>(H<sub>2</sub>O)<sub>6</sub>]Cl is reported for the first time.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1342-1349"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129257","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Thaluru M. Mohan Kumar , Besagarahally L. Bhaskar , Prabhakar Priyanka , Thayamma R. Divakara , Hemmige S. Yathirajan , Sean Parkin
{"title":"Crystal structure and Hirshfeld-surface analysis of an etoxazole metabolite designated R13","authors":"Thaluru M. Mohan Kumar , Besagarahally L. Bhaskar , Prabhakar Priyanka , Thayamma R. Divakara , Hemmige S. Yathirajan , Sean Parkin","doi":"10.1107/S2056989024010600","DOIUrl":"10.1107/S2056989024010600","url":null,"abstract":"<div><div>The crystal structure of a metabolite of the insecticide/acaricide etoxazole, designated R13 is presented along with a Hirshfeld surface analysis of intermolecular interactions present in the crystal structure.</div></div><div><div>The etoxazole metabolite <strong>R13</strong>, systematic name 4-(4-<em>tert</em>-butyl-2-ethoxyphenyl)-2-(2,6-difluorophenyl)oxazole (C<sub>21</sub>H<sub>21</sub>F<sub>2</sub>NO<sub>2</sub>), results from the oxidation of etoxazole, a chitin synthesis inhibitor belonging to the oxazoline class, widely used as an insecticide/acaricide since 1998. The structure of <strong>R13</strong> features a central oxazole ring with attached 2,6-difluorophenyl and 4-<em>t</em>-butyl-2-ethoxyphenyl moieties. The overall conformation gives dihedral angles between these rings and the oxazole of 24.91 (5)° (with difluorophenyl) and 15.30 (6)° (with <em>t</em>-butyl-ethoxyphenyl), indicating an overall deviation from planarity. Additionally, torsion angles of the ethoxy and <em>t</em>-butyl groups define the orientation of these substituents relative to their benzene ring. In the crystal packing, no significant hydrogen bonds are present, but a Hirshfeld surface analysis highlights weak intermolecular contacts leading to π–π-stacked dimers linked by weak C—H⋯N contacts. The packing analysis confirms that most intermolecular interactions involve hydrogen atoms.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1270-1273"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129416","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Crystal structure of 1,10-phenanthrolinium violurate violuric acid pentahydrate","authors":"Rüdiger W. Seidel , Tsonko M. Kolev","doi":"10.1107/S205698902401065X","DOIUrl":"10.1107/S205698902401065X","url":null,"abstract":"<div><div>The crystal structure of the co-crystal salt solvate 1,10-phenanthrolinium violurate violuric acid pentahydrate features a tri-periodic hydrogen-bonded network with the violurate and violuric acid residues each assembled into tapes and the phenanthrolinium cations residing in channels.</div></div><div><div>The title compound [systematic name: 1,10-phenanthrolinium 6-hydroxy-5-(oxidoimino)-1,3-diazinane-2,4-dione–6-hydroxy-5-(hydroxyimino)-1,3-diazinane-2,4-dione–water (1/1/5)], C<sub>12</sub>H<sub>9</sub>N<sub>2</sub><sup>+</sup>·C<sub>4</sub>H<sub>2</sub>N<sub>3</sub>O<sub>4</sub><sup>−</sup>·C<sub>4</sub>H<sub>3</sub>N<sub>3</sub>O<sub>4</sub>·5H<sub>2</sub>O, is a co-crystal salt hydrate comprising 1,10-phenanthrolinium cations, violurate anions, free violuric acid as co-former and five water molecules of crystallization per formula unit. The violurate and the violuric acid residues each form distinct N—H⋯O hydrogen-bonded tapes with a common <em>R</em><sup>2</sup><sub>2</sub>(8) hydrogen-bond motif extending parallel to (103). Solvent water molecules connect the tapes to form a tri-periodic hydrogen-bonded network with channels extending parallel to the <em>a</em>-axis direction, which accommodate the N—H⋯O<sub>water</sub> hydrogen-bonded 1,10-phenanthrolinium cations. Direct N—H⋯O hydrogen bonds between the 1,10-phenanthrolinium and violurate ions are not encountered.</div></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 12","pages":"Pages 1288-1292"},"PeriodicalIF":0.5,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143129249","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}