Irish Veterinary Journal最新文献

{"title":"Antimicrobial resistance in Escherichia coli isolated from on-farm and conventional hatching broiler farms in Ireland","authors":"Noelle Byrne, Lorcan O’Neill, Julia Adriana Calderόn Dίaz, E. Manzanilla, Ana P. Vale, F. Leonard","doi":"10.1186/s13620-022-00214-9","DOIUrl":"https://doi.org/10.1186/s13620-022-00214-9","url":null,"abstract":"","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"36 1","pages":""},"PeriodicalIF":2.9,"publicationDate":"2022-04-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81885035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The Irish cattle population structured by enterprise type: overview, trade & trends","authors":"Jonas Brock, M. Lange, J. Tratalos, Natascha V. Meunier, M. Guelbenzu-Gonzalo, S. More, H. Thulke, D. Graham","doi":"10.1186/s13620-022-00212-x","DOIUrl":"https://doi.org/10.1186/s13620-022-00212-x","url":null,"abstract":"","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"85 1","pages":""},"PeriodicalIF":2.9,"publicationDate":"2022-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83491298","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Serotyping, antibiogram, and detection of bacterial pathogens associated with bovine respiratory disease in selected areas of Ethiopia","authors":"Mirtneh Akalu, B. Vemulapati, T. Abayneh, T. Degefa, Getaw Deresse, E. Gelaye","doi":"10.1186/s13620-022-00210-z","DOIUrl":"https://doi.org/10.1186/s13620-022-00210-z","url":null,"abstract":"","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"12 1","pages":""},"PeriodicalIF":2.9,"publicationDate":"2022-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84381048","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Engaging with selective dry cow therapy: understanding the barriers and facilitators perceived by Irish farmers.","authors":"Sarah Huey, Michaela Kavanagh, Aine Regan, Moira Dean, Clare McKernan, Finola McCoy, Eoin G Ryan, Javier Caballero-Villalobos, Catherine I McAloon","doi":"10.1186/s13620-021-00207-0","DOIUrl":"10.1186/s13620-021-00207-0","url":null,"abstract":"<p><strong>Background: </strong>Selective dry cow therapy (SDCT) is widely promoted in dairy farming as a method to reduce antimicrobial usage. New legislation introduced by the European Union will restrict and regulate the prophylactic and metaphylactic use of antibiotics from January 2022. Blanket dry cow therapy continues to be a practice engaged in by many farmers in Ireland and for many of these farmers, moving towards SDCT would require a significant infrastructural, behavioural and/or cultural change on their farm. Existing research has reported the important need to understand farmers' motivations to initiate any substantial behaviour change. However, it is currently unknown what farmers know, think and believe about SDCT in Ireland. The aim of this study was to use qualitative methods to explore what barriers and facilitators farmers perceived to exist with SDCT and explore if they had chosen to implement SDCT after voluntarily participating in a funded dry cow consult with a trained veterinarian, with the objective of maximising the dry period udder health performance and moving safely to SDCT.</p><p><strong>Results: </strong>In this study, 19 farmers were contacted, and telephone interviews were conducted regarding farmers' beliefs about the consequences of SDCT. Audio recordings were professionally transcribed verbatim and analysed qualitatively using an inductive thematic analysis. The analysis identified 6 barriers and 6 facilitators to implementing SDCT. A significant fear of increasing mastitis incidence was evident that caused reluctance towards SDCT and reliance on antibiotics. Mixed perceptions on SDCT, infrastructure limitations, a perceived lack of preventive advice as well as peer influence were presented as barriers to SDCT. Farmers can build confidence when a graded approach to SDCT is implemented, which could help overcome the fear of SDCT and reliance on antibiotics. Regulatory pressure, high standards of farm hygiene and use of targeted veterinary consults were found to facilitate SDCT. Education was suggested to motivate farmers in the future uptake of SDCT. Despite cited negative influences, peer influence can be utilised to encourage the farming community.</p><p><strong>Conclusions: </strong>This study prioritises areas to facilitate the major behaviour change required as a dairy industry in order to move from blanket dry cow therapy to SDCT.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"28"},"PeriodicalIF":2.9,"publicationDate":"2021-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8540178/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39548217","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Warmblood fragile foal syndrome causative single nucleotide polymorphism frequency in horses in Ireland.","authors":"Áine Rowe,&nbsp;Sharon Flanagan,&nbsp;Gerald Barry,&nbsp;Lisa M Katz,&nbsp;Elizabeth A Lane,&nbsp;Vivienne Duggan","doi":"10.1186/s13620-021-00206-1","DOIUrl":"https://doi.org/10.1186/s13620-021-00206-1","url":null,"abstract":"<p><strong>Background: </strong>Warmblood Fragile Foal Syndrome (WFFS) is an autosomal recessive disorder caused by a mutation in the procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 (PLOD1) gene. Homozygosity for the mutation results in defective collagen synthesis which clinically manifests as the birth of non viable or still born foals with abnormally fragile skin. While the mutation has been identified in non Warmblood breeds including the Thoroughbred, to date all homozygous clinically affected cases reported in the scientific literature are Warmblood foals. The objective of this study was to investigate the carrier frequency of the mutation in the Thoroughbred and sport horse populations in Ireland.</p><p><strong>Methods: </strong>A test was developed at the UCD School of Veterinary Medicine using real-time PCR to amplify the PLOD1 gene c.2032G > A variant. A subset of the samples was also submitted to an external laboratory with a licensed commercial WFFS genetic test.</p><p><strong>Results: </strong>Warmblood Fragile Foal Syndrome genotyping was performed on hair samples from 469 horses representing 6 different breeds. Six of 303 (1.98%) sport horses tested and three of 109 (2.75%) Thoroughbreds tested were heterozygous for the WFFS polymorphism (N/WFFS). The WFFS polymorphism was not identified in the Standardbred, Cob, Connemara, or other pony breeds.</p><p><strong>Conclusions: </strong>The study identified a low frequency of the WFFS causative mutation in sport horses and Thoroughbreds in Ireland, highlighting the importance of WFFS genetic testing in order to identify phenotypically normal heterozygous carriers and to prevent the birth of nonviable foals.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"27"},"PeriodicalIF":2.9,"publicationDate":"2021-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8524838/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39554739","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Comparative analysis of genetic characterization of β-lactam-resistant Escherichia coli from bulk tank milk in Korea.","authors":"Hye-Ri Jung,&nbsp;Koeun Kim,&nbsp;Young Ju Lee","doi":"10.1186/s13620-021-00203-4","DOIUrl":"10.1186/s13620-021-00203-4","url":null,"abstract":"<p><strong>Background: </strong>This study was conducted to analyze the genetic characteristics of 41 β-lactam-resistant Escherichia coli isolates, which are one of the common causes of environmental mastitis, isolated from the bulk tank milk of 290 dairy farms in five factories operated by three dairy companies in Korea.</p><p><strong>Results: </strong>Analysis of the phenotypic and genotypic characteristics of β-lactam-resistant E. coli isolates revealed differences between factories even within the same company. Isolates from factory A1 and C1 showed high resistance to cephalothin (76.9 and 100%, respectively), which is a first-generation cephalosporins, whereas resistance to tetracycline was showed by only the isolates from factories B1 (60.0%), C2 (66.7%), and C3 (100%). Although all the 41 β-lactam-resistant E. coli isolates were positive for bla_OXA-1, bla_TEM-1 was highly prevalent in isolates from factories C2 (100%) and C3 (100%). Among 17 isolates resistant to both β-lactams and aminoglycosides, the most common multilocus sequence type was ST399 (13isolates, 76.5%). Furthermore, 2 (11.8%) and 12 (70.6%) isolates belonged to the phylogenetic groups B2 and D, respectively, which are invasive strains that cause intestinal infections, respectively. The predominant serogroup was O15 (70.6%), which is a globally distributed extraintestinal pathogen. Interestingly, one isolate from factory A1 belonged to O157 and carried six virulence genes, simultaneously.</p><p><strong>Conclusions: </strong>Although E. coli isolates were isolated from bulk tank milk, and not the clinical mastitis samples, the presence of the phylogenetic groups B2 and D, and the serogroups O15 and O157, which harbor antimicrobial resistance genes and virulence factors, can pose a threat to public health.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"26"},"PeriodicalIF":2.9,"publicationDate":"2021-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8454163/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39436585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"First detected case of rabbit Haemorrhagic disease virus 2 (RHDV2) in the Irish hare (Lepus timidus hibernicus).","authors":"Aideen Kennedy,&nbsp;Louise Britton,&nbsp;Andrew W Byrne,&nbsp;Christina Byrne,&nbsp;Mícheál Casey,&nbsp;Orla Flynn,&nbsp;Jose Maria Lozano,&nbsp;Ferdia Marnell,&nbsp;Maire McElroy,&nbsp;Neil Reid,&nbsp;Margaret Wilson,&nbsp;William FitzGerald","doi":"10.1186/s13620-021-00205-2","DOIUrl":"https://doi.org/10.1186/s13620-021-00205-2","url":null,"abstract":"<p><strong>Background: </strong>Rabbit haemorrhagic disease virus (RHDV) is a Lagovirus, a subgroup of the family Caliciviridae. RHDV2 is a variant first described in France in 2010, and has since spread globally. It has been reported in several Lagomorph species (rabbits, hares, and their relatives) as well as other mammals including voles and shrews. The disease has raised international concerns for its potential impact on population abundance trajectories, particularly as 25% of Lagomorphs are currently Red-Listed by the International Union for the Conservation of Nature (IUCN). The Irish hare (Lepus timidus hibernicus) is a subspecies of the mountain hare, L. timidus, and is endemic to Ireland, making it an Evolutionarily Significant Unit of intrinsic value.</p><p><strong>Case presentation: </strong>The first case of RHDV2 was detected in a wild Irish hare in July 2019. The individual exhibited atypical neurological behaviour (running in circles) prior to death. On necropsy, pink tinged foam was seen in the trachea and congestion was noted in the lungs, but there was no evidence of haemorrhages in any other organ. Both the liver and spleen were tested by reverse transcription real time qPCR confirming high levels of RHDV2 RNA. Histopathology confirmed multifocal necrotising hepatitis.</p><p><strong>Conclusion: </strong>The Irish hare is susceptible to RHDV2 infection. Further investigation is warranted to explore the clinical, epidemiological, and population biology implications.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"25"},"PeriodicalIF":2.9,"publicationDate":"2021-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8449885/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39430431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Identification of different attitudes towards paratuberculosis control using cluster analysis applied on data from an anonymous survey among German cattle farmers.","authors":"Veit Zoche-Golob,&nbsp;René Pützschel,&nbsp;Esra Einax,&nbsp;Karsten Donat","doi":"10.1186/s13620-021-00204-3","DOIUrl":"https://doi.org/10.1186/s13620-021-00204-3","url":null,"abstract":"<p><strong>Background: </strong>Paratuberculosis is a common disease in ruminants, causing economic losses in livestock farming, and a relationship between the exposure to its causative agent Mycobacterium avium subsp. paratuberculosis, and Crohn's disease in humans is discussed. Despite this, only a minority of cattle farmers have enroled in voluntary control programmes in most countries. Therefore, this study aimed at investigating the farmer's opinion on paratuberculosis and their motivations to participate in a control programme. The objective was to identify different groups among farmers regarding their motivation and thereby contribute to a better understanding of farmers' attitudes towards paratuberculosis control.</p><p><strong>Results: </strong>Two hundred twenty-five farmers responded to questionnaires that were distributed among cattle farmers in Saxony and Thuringia, federal states of Germany, together with boot-swab sampling sets for a free and anonymous herd-level paratuberculosis test. Among them, dairy herds and large herds were overrepresented. A hierarchical cluster analysis of the farmers' answers resulted in four groups that we tagged as 'informed sceptics', 'deniers', 'affected supporters' and 'free supporters'. In all groups, the majority considered paratuberculosis a threat to the public image of cattle farmers. Nearly all participants wanted to know the paratuberculosis herd status of purchased cattle. In contrast to the supporters, the informed sceptics and the deniers did not consider paratuberculosis a dangerous epizootic disease and would not welcome a mandatory control programme. The deniers and the affected supporters, but not the informed sceptics and the free supporters, assumed that their herd is affected by paratuberculosis. Unlike the deniers, all other groups would enrol in a control programme if the pathogen would have been found in their herd. Protecting future profitability and improving animal health were the two most important motivations to control paratuberculosis in all groups followed by aspects related to the marketing of breeding cattle. Most frequently, the costs and the assumed inaccuracy of diagnostics tests were mentioned as obstacles that hamper programme enrolment.</p><p><strong>Conclusions: </strong>Significantly different attitudes of farmers regarding paratuberculosis control were identified. Therefore, tailored rather than uniform communication strategies are required to enhance participation in voluntary paratuberculosis control programmes.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"24"},"PeriodicalIF":2.9,"publicationDate":"2021-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8444409/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39421747","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Epidemiology and molecular characterization of re-emerged virulent strains of Peste des Petits Ruminants virus among sheep in Kassala State, Eastern Sudan.","authors":"Fatima A Saeed,&nbsp;Mohammed M Gumaa,&nbsp;Sana A Abdelaziz,&nbsp;Khalid A Enan,&nbsp;Selma K Ahmed,&nbsp;Mohammed O Hussien","doi":"10.1186/s13620-021-00202-5","DOIUrl":"https://doi.org/10.1186/s13620-021-00202-5","url":null,"abstract":"<p><strong>Background: </strong>Peste des Petits Ruminants (PPR) is a severe contagious viral disease, which mainly affects small ruminants. PPR is caused by a Morbillivirus that belongs to the family Paramyxoviridae. In this study 12 suspected PPR outbreaks among sheep and goats were investigated in four localities in Kassala State, Eastern Sudan, during 2015-2017. The causative agent was confirmed by a Sandwich Enzyme-Linked Immunosorbent Assay (sELISA), and a Reverse Transcription Polymerase Chain Reaction (RT-PCR) targeting a partial sequence of nucleocapsid protein gene (N- gene) and a partial sequence of fusion protein gene (F- gene). Sequencing and phylogenetic analysis were carried out on six N- gene based RT-PCR products selected from two outbreaks occurred on border and inner localities of Kassala State to determine the circulating lineages of PPRV strains. Identity percentages were determined between isolates in this study and previous Sudanese, and other (African and Asian) isolates which clustered along with them.</p><p><strong>Results: </strong>Out of 30 samples, 22 (73.3%) were positive using sandwich ELISA. From 22 s ELISA positive samples, 17 (77.3%) were positive by Ngene based RT-PCR and only 7(43.8%) out of 16 positive samples by N gene based RT-PCR were positive using Fgene based RT-PCR. The sequencing and phylogenetic analysis confirmed involvement of the lineage IV of PPRV in outbreaks among small ruminants in Kassala State and high identity percentage between our isolates and previous Sudanese and other (African and Asian) isolates.</p><p><strong>Conclusions: </strong>The present study demonstrates that genetic relationship between PPRV strains circulating in sheep in Kassala State, Eastern Sudan, and PPRV strains characterized as lineage IV in neighboring African countries such as Eretria,Ethiopia, Egypt, and other Asian countries.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"23"},"PeriodicalIF":2.9,"publicationDate":"2021-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8424802/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39394166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Resistance and virulence distribution in enterococci isolated from broilers reared in two farming systems.","authors":"Teresa Semedo-Lemsaddek,&nbsp;João Bettencourt Cota,&nbsp;Tânia Ribeiro,&nbsp;Amélia Pimentel,&nbsp;Luís Tavares,&nbsp;Fernando Bernando,&nbsp;Manuela Oliveira","doi":"10.1186/s13620-021-00201-6","DOIUrl":"https://doi.org/10.1186/s13620-021-00201-6","url":null,"abstract":"<p><strong>Background: </strong>The impact of enterococci in human health has been growing for the last decades, mainly due to their resistance to several antimicrobial agents. Human consumption of contaminated meat, especially poultry, has been identified as a possible route of transmission. The aim of the present study was to evaluate and compare the antimicrobial resistance profiles and virulence genes of enterococci isolated from Portuguese conventional and free-range broiler farms.</p><p><strong>Results: </strong>Antibiotic susceptibility testing showed high frequencies of resistance to tetracycline in both farming systems. Resistance to erythromycin and gentamicin were detected in about half of the isolates. Resistance to penicillin was the less frequently observed and no vancomycin resistant isolates were identified. The majority of the enterococcal isolates, from either farming systems, were resistant to more than one antibiotic, and no statistical associations were found, except for penicillin resistance which associated with the genetic clusters. No differences were found between farming systems regarding the prevalence of tet(M), erm(B), aac (6')-Ie-aph (2″)-Ia and pbp5 genes, nevertheless pbp5 prevalence was associated with the different genetic clusters. Hemolytic activity was identified in 26.47% of all isolates and gelatinase activity in 50%. The gelE gene was identified in the majority of the isolates, whereas esp and agg genes were rarely detected. The cylA determinant was not detected in any of the isolates.</p><p><strong>Conclusions: </strong>Overall, results suggest that similar resistance patterns and virulence genes can be found in both farming systems, though enterococci in free-range conditions should be less prone to acquire further resistance genes.</p>","PeriodicalId":54916,"journal":{"name":"Irish Veterinary Journal","volume":"74 1","pages":"22"},"PeriodicalIF":2.9,"publicationDate":"2021-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8379790/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39330389","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}