Wildlife Biology最新文献

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Seasonal roost selection of wild turkeys at their northern range edge 野生火鸡在其北部范围边缘的季节性栖息选择
3区 生物学
Wildlife Biology Pub Date : 2023-11-06 DOI: 10.1002/wlb3.01133
Elizabeth A. Adey, Jennifer E. Baici, Jeff Bowman
{"title":"Seasonal roost selection of wild turkeys at their northern range edge","authors":"Elizabeth A. Adey, Jennifer E. Baici, Jeff Bowman","doi":"10.1002/wlb3.01133","DOIUrl":"https://doi.org/10.1002/wlb3.01133","url":null,"abstract":"Wild turkeys Meleagris gallopavo are diurnally active birds that spend the dark hours roosting in trees. We tested the hypothesis that multiple benefits exist for roost tree selection by wild turkeys, including thermoregulation, resource acquisition, and protection from predators. We compared 48 roost trees used by eastern wild turkeys M. g. silvestris in Ontario, Canada to 48 non‐roost trees sampled contemporaneously during 2017–2019 to determine roost site selection between seasons. Mean (± SE) roost tree height (21.4 ± 0.8 m) was taller than non‐roost trees (18.2 ± 0.8 m), and roost trees were also larger in diameter at breast height (58.1 ± 5.5 vs 38.7 ± 3.1 cm). Using ibuttons to collect microclimate temperatures at the tree, we found that mean temperature (± SE) of a deciduous roost (14.5 ± 0.1°C) was higher than temperature at either a coniferous roost (13.9 ± 0.1°C) or ambient temperature (13.2 ± 0.1°C) during the summer months. In winter however, we did not find any relationship between temperature and tree type. Roosts were closer to buildings (150.8 ± 26.0 m) in the winter compared to summer and year‐round roosts, and winter roosts were also farther away from crops (395.2 ± 63.7 m) compared to roost sites used year‐round. Summer roosts were closer to roads (143 ± 36.3 m) than the roosts in the winter and roosts used year‐round. Our data suggest that thermoregulation is not the driving force behind roost selection; instead, predator avoidance appears to play the most important role, with some weaker evidence in support of proximity to resources.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"45 7","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135681982","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Monitoring wildlife population trends with sample counts: a case study on the Alpine ibex (Capra ibex) 利用样本计数监测野生动物种群趋势:以高山野山羊为例
3区 生物学
Wildlife Biology Pub Date : 2023-11-06 DOI: 10.1002/wlb3.01162
Matteo Panaccio, Alice Brambilla, Bruno Bassano, Tessa Smith, Achaz von Hardenberg
{"title":"Monitoring wildlife population trends with sample counts: a case study on the Alpine ibex (<i>Capra ibex</i>)","authors":"Matteo Panaccio, Alice Brambilla, Bruno Bassano, Tessa Smith, Achaz von Hardenberg","doi":"10.1002/wlb3.01162","DOIUrl":"https://doi.org/10.1002/wlb3.01162","url":null,"abstract":"Monitoring population dynamics is of fundamental importance in conservation but assessing trends in abundance can be costly, especially in large and rough areas. Obtaining trend estimations from counts performed in only a portion of the total area (sample counts) can be a cost‐effective method to improve the monitoring and conservation of species difficult to count. We tested the effectiveness of sample counts in monitoring population trends of wild animals, using as a model population the Alpine ibex Capra ibex in the Gran Paradiso National Park (Italy), both with computer simulations and using historical count data collected over the last 65 years. Despite sample counts failed to correctly estimate the true population abundance, sampling half of the target area could reliably monitor the trend of the target population. In case of strong changes in abundance, an even lower proportion of the total area could be sufficient to identify the direction of the population trend. However, when there is a high yearly trend variability, the required number of samples increases and even counting in the entire area can be ineffective to detect population trends. The effect of other parameters, such as which portion of the area is sampled and detectability, was lower, but these should be tested case by case. Sample counts could therefore constitute a viable alternative to assess population trends, allowing for important, cost‐effective improvements in the monitoring of wild animals of conservation interest.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"46 16","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135682324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Protecting the resource: an assessment of mitigation methods used to protect large trees from African elephant impact in a savanna system 保护资源:对稀树草原系统中用于保护大树免受非洲象影响的缓解方法的评估
3区 生物学
Wildlife Biology Pub Date : 2023-10-23 DOI: 10.1002/wlb3.01170
Robin M. Cook, Edward T. F. Witkowski, Michelle D. Henley
{"title":"Protecting the resource: an assessment of mitigation methods used to protect large trees from African elephant impact in a savanna system","authors":"Robin M. Cook, Edward T. F. Witkowski, Michelle D. Henley","doi":"10.1002/wlb3.01170","DOIUrl":"https://doi.org/10.1002/wlb3.01170","url":null,"abstract":"African elephants Loxodonta africana can alter the structural components of savanna ecosystems, often through the reduction of the large tree (≥ 5 m height) cover component. Elephant impact can be amplified in small, protected areas, or areas where water is readily available to elephants. One management option is to protect large trees directly using applied mitigation methods to limit elephant impact. In this paper, we assessed and compared the effectiveness and logistical requirements of four mitigation methods that have been applied to protect large trees from elephant impact in South Africa's Greater Kruger National Park – namely African honeybees Apis mellifera scutellata in beehives; creosote oil in glass jars, concrete pyramids arranged in circles around trees, as well as wire‐netting the trees' main stems. For each method, elephant impact levels and tree mortality rates were measured over a 2–5‐year period depending on the method in use. Sample sizes ranged from 43 to 59 trees per mitigation method, with a comparable control, which was a tree of the same species and morphological dimensions but lacking any mitigation application. Beehives were the most effective method at reducing tree loss, significantly reducing tree mortality from 34% (6.8%/year) in control trees to only 10% (2% year ‐1 ) over the five‐year experimental period. However, beehives were the most expensive method to apply to a tree, although this cost can be compensated through honey sales. Concrete pyramids reduced tree loss when the combined pyramid radius was &gt; 1.5 m in length, whilst wire‐netting was effective against bark‐stripping by elephants but was still vulnerable to heavier forms of impact such as uprooting and stem snapping. Creosote jars did not prevent elephants from impacting treated trees. Our results provide managers with a toolkit for protecting large trees against elephant impact, commenting on both the efficacy and the logistical constraints for each method.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"42 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135413983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
How fences communicate interspecies codes of conduct in the landscape: toward bidirectional communication? 栅栏如何在景观中传达物种间的行为准则:走向双向交流?
3区 生物学
Wildlife Biology Pub Date : 2023-10-17 DOI: 10.1002/wlb3.01146
Erica von Essen, Martin Drenthen, Manisha Bhardwaj
{"title":"How fences communicate interspecies codes of conduct in the landscape: toward bidirectional communication?","authors":"Erica von Essen, Martin Drenthen, Manisha Bhardwaj","doi":"10.1002/wlb3.01146","DOIUrl":"https://doi.org/10.1002/wlb3.01146","url":null,"abstract":"The fence provides two functions in wildlife management. First, it physically blocks, deters or impedes wild animals from access to protected areas or resources. Second, the fence signals impassability, danger, pain or irritation to animals through both of these pathways: the actual blockade and the signal of no access both communicates to wild animals that they should stay away, producing area effects which constrain animal mobility. The mere presence of a fence, while imperfect and potentially passable, can come to establish an area effect of avoidance. In this regard, fences are part of an interspecies communication on the basis of mutually understood signals in the landscape. In this paper, we consider how fences, both physical, such as walls, and virtual, such as ‘biofences' that use sensory deterrents, signal danger or no access to wildlife, and with what practical and conceptual limitations. Through a framework of ecosemiotics, the communication of signals between wildlife and humans, we discuss the communicative role fences play in human–wildlife interactions. First, we outline the way in which ecosemiotics may be leveraged to manage human–wildlife conflicts by utilizing fences as signals. Then we explain miscommunication, and how this impacts the success of fences. Finally, we discuss the normative problems of attempting to signal to wildlife how to behave and where to be, and raise the need for bidirectional communication across species, such that wild animals are also seen as participants in negotiating space and access around humans.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"205 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135995531","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nonbreeding season survival of northern bobwhite in northeastern Colorado 科罗拉多州东北部北部山齿鹑非繁殖期的存活率
3区 生物学
Wildlife Biology Pub Date : 2023-10-17 DOI: 10.1002/wlb3.01126
Joseph M. Wolske, Adam C. Behney, Larkin A. Powell
{"title":"Nonbreeding season survival of northern bobwhite in northeastern Colorado","authors":"Joseph M. Wolske, Adam C. Behney, Larkin A. Powell","doi":"10.1002/wlb3.01126","DOIUrl":"https://doi.org/10.1002/wlb3.01126","url":null,"abstract":"Northern bobwhites have experienced population declines in Colorado and range wide. Estimating vital rates can provide clues to factors limiting population growth rate. Although recent estimates of breeding season survival in the northwest corner of the northern bobwhite range are available, there have been no recent studies on nonbreeding season survival. We used radio‐telemetry to estimate nonbreeding season (October–March) survival of northern bobwhites at two study sites in northeastern Colorado during winter 2019–2020 and 2020–2021. Based on our sample of 157 bobwhites, we found that survival was highly variable between years and was negatively affected by colder daily minimum temperatures and deeper snow depths. Seasonal (six‐month) survival during the first year was 0.219 (SE = 0.040) and during the second year was 0.006 (SE = 0.005). We found no evidence that sex, age or study site influenced survival, and very weak support for an effect of body mass. During our study, there were two extreme winter weather events, during which we found unusually high numbers of non‐predation mortality. Overall, northern bobwhite nonbreeding season survival in the northwest corner of their range appears to be generally similar to other regions, except during extreme winter weather events, which resulted in high mortality. We encourage managers to create or maintain vegetation characteristics that will provide shelter from winter weather while also providing abundant food in close proximity.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"73 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135995155","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of breeding distribution and chronology of North American scoters 北美牧蹄鼠的繁殖分布及年代学评价
3区 生物学
Wildlife Biology Pub Date : 2023-10-14 DOI: 10.1002/wlb3.01099
Kristin Bianchini, Scott G. Gilliland, Alicia M. Berlin, Timothy D. Bowman, W. Sean Boyd, Susan E. W. De La Cruz, Daniel Esler, Joseph R. Evenson, Paul L. Flint, Christine Lepage, Scott R. McWilliams, Dustin E. Meattey, Jason E. Osenkowski, Matthew C. Perry, Jean‐François Poulin, Eric T. Reed, Christian Roy, Jean‐Pierre L. Savard, Lucas Savoy, Jason L. Schamber, Caleb S. Spiegel, John Takekawa, David H. Ward, Mark L. Mallory
{"title":"Evaluation of breeding distribution and chronology of North American scoters","authors":"Kristin Bianchini, Scott G. Gilliland, Alicia M. Berlin, Timothy D. Bowman, W. Sean Boyd, Susan E. W. De La Cruz, Daniel Esler, Joseph R. Evenson, Paul L. Flint, Christine Lepage, Scott R. McWilliams, Dustin E. Meattey, Jason E. Osenkowski, Matthew C. Perry, Jean‐François Poulin, Eric T. Reed, Christian Roy, Jean‐Pierre L. Savard, Lucas Savoy, Jason L. Schamber, Caleb S. Spiegel, John Takekawa, David H. Ward, Mark L. Mallory","doi":"10.1002/wlb3.01099","DOIUrl":"https://doi.org/10.1002/wlb3.01099","url":null,"abstract":"North America's scoter species are poorly monitored relative to other waterfowl. Black Melanitta americana , surf M. perspicillata , and white‐winged M. deglandi scoter abundance and trend estimates are thus uncertain in many parts of these species' ranges. The most extensive source of waterfowl abundance and distribution data in North America is the Waterfowl breeding population and habitat survey (WBPHS). Although the WBPHS effectively monitors most species, both its timing and geographic coverage may preclude accurate scoter monitoring. Therefore, our goal was to better define when and where scoters breed to help interpret survey results and optimize potential supplemental survey efforts for scoters. We integrated satellite telemetry tracking data from scoters marked at multiple molting, staging, breeding, and wintering areas along the Atlantic and Pacific coasts to quantify continent‐wide breeding chronology and distribution. We also examined possible drivers of variation in timing of arrival, length of stay, and departure at nesting locations. We documented a northwest to southeast distribution of estimated breeding sites across Alaska and Canada. On average, scoters arrived at nest sites on 1 June. Surf scoters and Pacific black scoters arrived earliest and departed earliest. Pacific‐wintering black and white‐winged scoters began breeding earlier than Atlantic‐wintering birds. Additionally, birds arrived at nesting locations earlier in years with earlier snowmelt, and later snowmelt reduced lengths of stay for males. Breeding chronology also varied by age group, with adults arriving earlier than subadults. Our study is the first to comprehensively describe spatial variation in timing of breeding of both Atlantic and Pacific populations of all three scoter species across North America. Our results increase our understanding of how current surveys enumerate scoters and will inform possible supplemental efforts to improve continental monitoring of scoter populations.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"13 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135766280","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Adaptive response of Siberian roe deer Capreolus pygargus to climate and altitude in the temperate forests of South Korea 韩国温带森林西伯利亚狍子对气候和海拔的适应反应
3区 生物学
Wildlife Biology Pub Date : 2023-10-10 DOI: 10.1002/wlb3.01138
Tae‐Kyung Eom, Jae‐Kang Lee, Dong‐Ho Lee, Hyeongyu Ko, Shin‐Jae Rhim
{"title":"Adaptive response of Siberian roe deer <i>Capreolus pygargus</i> to climate and altitude in the temperate forests of South Korea","authors":"Tae‐Kyung Eom, Jae‐Kang Lee, Dong‐Ho Lee, Hyeongyu Ko, Shin‐Jae Rhim","doi":"10.1002/wlb3.01138","DOIUrl":"https://doi.org/10.1002/wlb3.01138","url":null,"abstract":"Understanding climatic effect on wildlife is essential to prediction and management of climate change's impact on the ecosystem. The climatic effect can interact with other environmental factors. This study was aimed to determine effects of climate and altitude on Siberian roe deer Capreolus pygargus activity in temperate forests of South Korea. We conducted camera trapping to investigate roe deer's activity level from spring to fall. Logistic regressions were used to determine effects of diel period, temperature, rain, and altitude on the activity level. A negative relationship was noted between temperature and the activity level due to thermoregulatory costs. Roe deer activity exhibited nocturnal and crepuscular patterns during summer and the other seasons, respectively, possibly due to heat stress in summer. In addition, the effect of temperature differed between high‐ and low‐altitude areas. In low‐altitude areas, temperature affected negatively the activity level throughout the study period. Conversely, in high‐altitude areas, temperature affected activity level only in summer and early fall. Lower temperatures in higher altitudes favoured roe deer activity, resulting in roe deer's preference towards higher altitude areas. However, roe deer's movement toward lower altitudes was observed in summer. Reduced heat stress by changing activity pattern allowed them to access lower altitude areas with greater resource availability during summer. This study revealed how roe deer activity varied across seasons and altitudes, considering the interactions among weather, microclimate and resource availability. It provides insight into how montane species adapt to various climatic conditions, and this could have important implications for wildlife management and conservation efforts.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"2015 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136359236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Straight from the coyote's mouth: genetic identification of prey through oral swabs of predators 直接从土狼的嘴里:通过捕食者的口腔拭子来识别猎物的基因
3区 生物学
Wildlife Biology Pub Date : 2023-10-10 DOI: 10.1002/wlb3.01155
Julie K. Young, Amanda M. Mast, James A. Walton, Torrey Rodgers, Antoinette J. Piaggio, Daniel R. Taylor, Karen E. Mock
{"title":"Straight from the coyote's mouth: genetic identification of prey through oral swabs of predators","authors":"Julie K. Young, Amanda M. Mast, James A. Walton, Torrey Rodgers, Antoinette J. Piaggio, Daniel R. Taylor, Karen E. Mock","doi":"10.1002/wlb3.01155","DOIUrl":"https://doi.org/10.1002/wlb3.01155","url":null,"abstract":"Human–carnivore conflicts often involve the depredation of domestic livestock. These depredation events are rarely observed, yet mitigation typically involves identifying the species or individual involved for removal or relocation. We tested a molecular method to identify individuals involved in depredation events using mouth swabs to determine if prey DNA could be detected, and for how long. We fed mule deer Odocoileus hemionus meat to captive coyotes Canis latrans and swabbed their mouths at five predetermined intervals between 2–72 h after consumption of the deer meat. We assessed two different molecular forensic methods to analyze the saliva swabs: qPCR for species identification and microsatellites for individual prey identification. We found that qPCR analysis was highly effective, detecting the deer DNA in the coyote saliva for up to 72 h post‐deer consumption. Our results suggest that if an individual carnivore suspected of livestock depredation is captured within 72 h of a depredation incident, it is possible to confirm their potential involvement with a buccal swab and qPCR analysis. Utilizing this method could aid in more targeted and effective removal of individual problem carnivores as opposed to widespread removal of involved species.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136359521","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Infrared barriers as a detection tool to reduce human–elephant conflicts 红外屏障作为一种检测工具来减少人象冲突
3区 生物学
Wildlife Biology Pub Date : 2023-10-10 DOI: 10.1002/wlb3.01124
María Montero‐Botey, Ramón Perea
{"title":"Infrared barriers as a detection tool to reduce human–elephant conflicts","authors":"María Montero‐Botey, Ramón Perea","doi":"10.1002/wlb3.01124","DOIUrl":"https://doi.org/10.1002/wlb3.01124","url":null,"abstract":"Elephant incursions into farms represent an important challenge for local communities and farmers living around protected areas, but also for the long‐term conservation of elephants. Early detection of elephants is a promising technique to reduce elephant presence in farms and human settlements reducing human–elephant interactions. In this study we investigated the potential of infrared barriers to detect African savannah elephants Loxodonta africana . We designed and tested battery‐operated photoelectric beam sensors in 12 locations of southern Tanzania and assessed the elephant detection accuracy through camera trapping for a total of 246 days. We obtained 1803 recordings of wildlife crossing the barriers range (30 different species of mammals and several bird and bat species). Our results show that infrared barriers, when located at 1.75–2.2 m high, detect 100% of adult elephants and ∼ 29% of subadult elephants. Giraffes were the only other wildlife species detected by the barriers. Interestingly, large vehicles were also detected, which might be helpful to prevent motorized poaching. Given the gregarious behaviour of elephant families, and the limited access for vehicles, infrared barriers may represent an interesting and cost‐effective detection system for early warning strategies in elephant‐dominated areas of Africa and Asia or for other large‐sized visitors.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"77 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136359821","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
RNA sampling time on postmortem avian carcasses in the wild 野外死禽尸体的RNA采样时间
3区 生物学
Wildlife Biology Pub Date : 2023-09-28 DOI: 10.1002/wlb3.01157
Ziying Shao, Xian Hou, Yangkang Chen, Zhenzhen Lin, Xiangjiang Zhan
{"title":"RNA sampling time on postmortem avian carcasses in the wild","authors":"Ziying Shao, Xian Hou, Yangkang Chen, Zhenzhen Lin, Xiangjiang Zhan","doi":"10.1002/wlb3.01157","DOIUrl":"https://doi.org/10.1002/wlb3.01157","url":null,"abstract":"Genetic sampling, especially high‐quality RNA from wild avian populations, is challenging in wildlife biology due to rapid RNA degradation. Although carcasses could be a potential RNA source, the optimal postmortem sampling time on the avian carcasses under field conditions remains unclear. Here, we carried out a field experiment on the Qinghai‐Tibet Plateau (QTP) and evaluated the relationship between PMI and RNA degradation in three tissue types (muscle, brain, and liver) of the domestic chicken Gallus gallus domesticus carcasses. In the muscle and brain tissues, we found that the RNA Integrity Number (RIN) of samples collected within 60 h postmortem was more than 7.0, suggesting a high RNA extract quality. The following RNA‐seq experiment demonstrated that gene expression profiles of the samples collected within 36 h postmortem were comparable to those of fresh samples (i.e. 0 h), with a low percentage of differentially expressed genes (< 3.0%) observed between samples at 0 and 36 h postmortem. However, in the liver tissue, RNA samples already degraded at 12 h postmortem, showing low RIN values (< 7.0), different gene expression profiles from fresh samples, and a high percentage of differentially expressed genes (15.6%). Therefore, our study suggests that samples from muscle and brain tissues collected within 36 h postmortem are qualified for RNA‐seq analyses. In contrast, only the fresh RNA samples from liver tissue are qualified. Our study provides a practicable and efficient sampling strategy for the transcriptome study on avian populations under extreme environment such as the QTP.","PeriodicalId":54405,"journal":{"name":"Wildlife Biology","volume":"30 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135425373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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