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Distinct dopaminergic spike-timing-dependent plasticity rules are suited to different functional roles. 不同的多巴胺能峰值时间依赖的可塑性规则适用于不同的功能角色。
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7456628/v1
Baram Sosis, Jonathan E Rubin
{"title":"Distinct dopaminergic spike-timing-dependent plasticity rules are suited to different functional roles.","authors":"Baram Sosis, Jonathan E Rubin","doi":"10.21203/rs.3.rs-7456628/v1","DOIUrl":"https://doi.org/10.21203/rs.3.rs-7456628/v1","url":null,"abstract":"<p><p>Various mathematical models have been formulated to describe the changes in synaptic strengths resulting from spike-timing-dependent plasticity (STDP). A subset of these models include a third factor, dopamine, which interacts with spike timing to contribute to plasticity at specific synapses, notably those from cortex to striatum at the input layer of the basal ganglia. Theoretical work to analyze these plasticity models has largely focused on abstract issues, such as the conditions under which they may promote synchronization and the weight distributions induced by inputs with simple correlation structures, rather than on scenarios associated with specific tasks, and has generally not considered dopamine-dependent forms of STDP. In this paper we introduce forms of dopamine-modulated STDP adapted from previously proposed plasticity rules. We then analyze, mathematically and with simulations, their performance in two biologically relevant scenarios. We test the ability of each of the three models to complete simple value estimation and action selection tasks, studying the learned weight distributions and corresponding task performance in each setting. Interestingly, we find that each plasticity rule is well suited to a subset of the scenarios studied but falls short in others. Different tasks may therefore require different forms of synaptic plasticity, yielding the prediction that the precise form of the STDP mechanism present may vary across regions of the striatum, and other brain areas impacted by dopamine, that are involved in distinct computational functions.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486093/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215415","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of Perineuronal Nets (PNNs) in the Paraventricular Nucleus of the Hypothalamus (PVN) and their alteration in neurogenic hypertension. 下丘脑室旁核神经网络(PNNs)的特征及其在神经源性高血压中的改变。
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7521051/v1
Ismary Blanco, Sichu Chen, Erin Yeo, Samantha Reasonover, Monica M Santisteban
{"title":"Characterization of Perineuronal Nets (PNNs) in the Paraventricular Nucleus of the Hypothalamus (PVN) and their alteration in neurogenic hypertension.","authors":"Ismary Blanco, Sichu Chen, Erin Yeo, Samantha Reasonover, Monica M Santisteban","doi":"10.21203/rs.3.rs-7521051/v1","DOIUrl":"10.21203/rs.3.rs-7521051/v1","url":null,"abstract":"<p><p>Perineuronal nets (PNNs) are key regulators of neuronal excitability, yet whether they are altered during neurogenic hypertension is unknown. Here, we mapped the developmental trajectory of PNNs in the paraventricular nucleus of the hypothalamus (PVN), a crucial nucleus involved in blood pressure regulation, and examined their modulation in neurogenic hypertension. We show that PNNs in PVN follow a developmental pattern, enwrapping 25% of neuronal nitric oxide synthase (nNOS)-expressing neurons, with sex differences observed only in oxytocin (OXT)-enwrapped populations. In the DOCA-salt mouse model of neurogenic hypertension, males, but not females, exhibit an increased number and area of PNNs in the PVN. Given that PNNs modulate neuronal activity, our findings may implicate recruitment of previously \"silent\" neurons as potential contributors of PVN hyperactivity in hypertension. These results demonstrate that PNN remodeling is associated with neurogenic hypertension.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486072/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215199","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Balancing Efficiency and Engagement: AI-Assisted Content for Research Communications in the RECOVER Initiative. 平衡效率和参与:人工智能辅助内容的研究通信在恢复计划。
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7660686/v1
Zoe Lewczak, Praveen Mudumbi, Janelle Linton, Maika Mitchell, Jasmine Briscoe, Pricilla Short, Nita Jain, Anisha Sekar, Alicia Chung
{"title":"Balancing Efficiency and Engagement: AI-Assisted Content for Research Communications in the RECOVER Initiative.","authors":"Zoe Lewczak, Praveen Mudumbi, Janelle Linton, Maika Mitchell, Jasmine Briscoe, Pricilla Short, Nita Jain, Anisha Sekar, Alicia Chung","doi":"10.21203/rs.3.rs-7660686/v1","DOIUrl":"https://doi.org/10.21203/rs.3.rs-7660686/v1","url":null,"abstract":"<p><p><b>Introduction</b> The growing availability of AI tools is transforming health and science communication by streamlining content creation and promotion. This study investigates the impact of AI-assisted research summaries on user engagement with the NIH-funded RECOVER program's website and evaluates the efficiency and readability of the content. <b>Methods</b> We analyzed Google Analytics 4 data from two distinct periods: one with entirely human-generated content and a second with AI-assisted content. We measured changes in page views, active users, and average engagement time, and assessed the review time and readability of the AI-enhanced summaries. <b>Results</b> There was no significant change in page views or active users between the two periods. However, average engagement time increased by 4.37 seconds (P = .0461), suggesting AI-assisted content may be more compelling. Human review of AI-drafts averaged 19.88 changes, and readability improved, with the mean Flesch-Kincaid grade level decreasing from 12.28 to 11.56. <b>Conclusion</b> This study demonstrates that AI can be a valuable tool for accelerating the creation of accessible and engaging content. Our findings highlight a crucial balance: while AI can save effort and reduce cost in public engagement efforts, human oversight remains essential to ensure the accuracy, clarity, and accessibility of vital health communications.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486106/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215453","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Memory deficits in hypertensive ApoE4 mice reversed by P2Y12 inhibition via different mechanisms in males and perimenopausal females. P2Y12抑制可通过不同机制逆转高血压ApoE4小鼠的记忆缺陷。
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7643285/v1
Lianne Trigiani, Nicole Chernavsky, Rachel Kim, Nuri Hong, Robert Hawkins, Emily Le, Zahra Bahninameh, Keri Yamaguchi, Jonah Bernard, Amanda Huang, Daniel Rivera, Nathaniel Allan-Rahill, Michael Lamont, Roberta Marongiu, Costantino Iadecola, Nozomi Nishimura, Chris Schaffer
{"title":"Memory deficits in hypertensive ApoE4 mice reversed by P2Y12 inhibition via different mechanisms in males and perimenopausal females.","authors":"Lianne Trigiani, Nicole Chernavsky, Rachel Kim, Nuri Hong, Robert Hawkins, Emily Le, Zahra Bahninameh, Keri Yamaguchi, Jonah Bernard, Amanda Huang, Daniel Rivera, Nathaniel Allan-Rahill, Michael Lamont, Roberta Marongiu, Costantino Iadecola, Nozomi Nishimura, Chris Schaffer","doi":"10.21203/rs.3.rs-7643285/v1","DOIUrl":"10.21203/rs.3.rs-7643285/v1","url":null,"abstract":"<p><p>Apolipoprotein E4 (ApoE4) genotype, hypertension, and biological sex are critical risk factors for Alzheimer's disease and related dementias. Yet, their combined impact on early cerebrovascular dysfunction, brain inflammation, and memory impairment remains poorly understood. We developed a translational mouse model incorporating human ApoE4, hypertension via angiotensin II infusion, and induced accelerated ovarian failure (AOF) to mimic perimenopause in females to investigate these interactions. Hypertensive ApoE4 mice of both sexes exhibited impaired spatial working memory, decreased cerebral blood flow, increased neuroinflammation, and decreased blood brain barrier integrity, recapitulating key early clinical features observed in human populations with these risk factors. Brain blood flow reduction was associated with an increased incidence of capillary stalling, with notable sex differences in the extent and cellular composition of stalls: in males, stalling was strongly elevated and mostly due to red blood cell arrest, while stalling was modestly elevated in peri-AOF females with most stalls including leukocytes. Treatment with prasugrel, a P2Y12 receptor inhibitor, improved memory performance in both sexes but was correlated with different physiological effects - restored cerebral blood flow in males and reduced microglia motility and inflammation in peri-AOF females. Platelet depletion mimicked prasugrel's blood flow and cognitive benefits in males, while microglia depletion selectively rescued memory in females. Our work emphasizes the necessity of including translationally relevant female mouse models in neurodegenerative disease studies, and our findings highlight the importance of risk profile-specific interventions and demonstrate that early vascular dysfunction may be a key, sex-dependent driver of cognitive decline.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486115/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215397","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PATTY corrects open-chromatin bias for improved bulk and single-cell CUT&Tag profiling. PATTY纠正了开放染色质偏差,以改善散装和单细胞CUT&amp;Tag分析。
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7632127/v1
Shengen Shawn Hu, Zhangli Su, Lin Liu, Qingying Chen, Megan C Grieco, Mengxue Tian, Anindya Dutta, Chongzhi Zang
{"title":"PATTY corrects open-chromatin bias for improved bulk and single-cell CUT&Tag profiling.","authors":"Shengen Shawn Hu, Zhangli Su, Lin Liu, Qingying Chen, Megan C Grieco, Mengxue Tian, Anindya Dutta, Chongzhi Zang","doi":"10.21203/rs.3.rs-7632127/v1","DOIUrl":"10.21203/rs.3.rs-7632127/v1","url":null,"abstract":"<p><p>Precise profiling of epigenomes is essential for better understanding chromatin biology and gene regulation. Cleavage Under Targets & Tagmentation (CUT&Tag) is an efficient epigenomic profiling technique that can be performed on a low number of cells and at the single-cell level. With its growing adoption, CUT&Tag datasets spanning diverse biological systems are rapidly accumulating in the field. CUT&Tag assays use the hyperactive transposase Tn5 for DNA tagmentation. Tn5's preference toward accessible chromatin alters CUT&Tag sequence read distributions in the genome and introduces open-chromatin bias that can confound downstream analysis, an issue more substantial in sparse single-cell data. We show that open-chromatin bias extensively exists in published CUT&Tag datasets, including those generated with recently optimized high-salt protocols. To address this challenge, we present PATTY (Propensity Analyzer for Tn5 Transposase Yielded bias), a comprehensive computational method that corrects open-chromatin bias in CUT&Tag data by leveraging accompanying ATAC-seq. By integrating transcriptomic and epigenomic data using machine learning and integrative modeling, we demonstrate that PATTY enables accurate and robust detection of occupancy sites for both active and repressive histone modifications, including H3K27ac, H3K27me3, and H3K9me3, with experimental validation. We further develop a single-cell CUT&Tag analysis framework built on PATTY and show improved cell clustering when using bias-corrected single-cell CUT&Tag data compared to using uncorrected data. Beyond CUT&Tag, PATTY sets a foundation for further development of bias correction methods for improving data analysis for all Tn5-based high-throughput assays.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486118/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Global Changes in Gene Expression and Splicing in Alcoholic Liver Disease. 酒精性肝病基因表达和剪接的全局变化
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7380649/v1
Ilya O Blokhin, Derek Van Booven, Josepmaria Argemi, Mengying Li, J Sunil Rao, Estelle Barbier, Markus Heilig, Jin Cheng, Antoine Douaihy, Ramon Bataller, Claes Wahlestedt
{"title":"Global Changes in Gene Expression and Splicing in Alcoholic Liver Disease.","authors":"Ilya O Blokhin, Derek Van Booven, Josepmaria Argemi, Mengying Li, J Sunil Rao, Estelle Barbier, Markus Heilig, Jin Cheng, Antoine Douaihy, Ramon Bataller, Claes Wahlestedt","doi":"10.21203/rs.3.rs-7380649/v1","DOIUrl":"10.21203/rs.3.rs-7380649/v1","url":null,"abstract":"<p><p>Alcohol use disorder is a widespread illness commonly leading to alcoholic liver disease (ALD) and cirrhosis with an increased incidence of hepatocellular carcinoma (HCC), but the mechanisms of alcohol-related oncogenesis in the liver are incompletely understood. We tested the hypothesis that ALD predisposes to HCC via dysregulation of splicing. RNA sequencing was performed on liver biopsies from patients with different stages of ALD: early alcoholic steatohepatitis (eASH), non-severe alcoholic hepatitis (nsAH), and severe alcoholic hepatitis (sAH); furthermore, explants were collected from patients who underwent liver transplantation due to sAH (exAH). We found that alcohol caused widespread changes in transcriptome in all stages of ALD: among ~ 58,000 analyzed genomic features, ~ 4,900 were altered in eASH, ~ 9,100 - in nsAH, 14,100 - in sAH, and ~ 14,300 - in exAH. We observed thousands of missplicing events in all hepatic conditions, with mutually exclusive exons (MEE) being the most common event and exon skipping (ES) - second most common event. Analysis of ~ 600,000 exons revealed that ALD is associated with a genome-wide effect on exon expression, with ~ 50,000 exons being differentially expressed in eASH, ~ 130,000 - in nsAH, ~ 150,000 - in sAH, and ~ 120,000 - in exAH. To determine whether alcohol directly perturbs splicing, we subjected rats to alcohol vapor for 7 weeks and found that the expression of multiple snRNAs was drastically decreased, while expression of splicing factors was not affected. Screening of oncogenes and tumor suppressors, commonly involved in HCC pathogenesis, revealed that ALD affected the hepatic expression and/or splicing of most of these cancer-related genes. In summary, it appears that alcohol causes profound genome-wide changes in gene expression and splicing in the liver, likely via affecting the spliceosome. This results in altered expression and missplicing of key oncogenes and tumor suppressors involved in HCC, suggesting a novel mechanism of oncogenesis in the liver of patients with ALD.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486121/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215440","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparing the predictive value of plasma p-tau217 and CSF biomarkers (p-tau181, Aβ42) using amyloid positron emission tomography in Alzheimer's continuum. 比较淀粉样正电子发射断层扫描在阿尔茨海默病连续体中血浆p-tau217和脑脊液生物标志物(p-tau181, a - β42)的预测价值
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7327653/v1
Mohammad Hossein Azaraein, Elham Zarrazvand, Fatemeh Heydari, Nasim Asimi, Elham Ramezannezhad, Deniz Rahimipour, Kimia Janeshin, Aida Mahdian, Maryam Fallahpour Sichani, Shaghayegh Farhadi, Razieh Zamiri, Mohammad Amir Amirian, Maryam Bemanalizadeh
{"title":"Comparing the predictive value of plasma p-tau217 and CSF biomarkers (p-tau181, Aβ42) using amyloid positron emission tomography in Alzheimer's continuum.","authors":"Mohammad Hossein Azaraein, Elham Zarrazvand, Fatemeh Heydari, Nasim Asimi, Elham Ramezannezhad, Deniz Rahimipour, Kimia Janeshin, Aida Mahdian, Maryam Fallahpour Sichani, Shaghayegh Farhadi, Razieh Zamiri, Mohammad Amir Amirian, Maryam Bemanalizadeh","doi":"10.21203/rs.3.rs-7327653/v1","DOIUrl":"10.21203/rs.3.rs-7327653/v1","url":null,"abstract":"<p><strong>Introduction: </strong>This study explores the diagnostic accuracy of different biomarkers for Alzheimer's disease (AD) using data from the Alzheimer's Disease Neuroimaging Initiative (ADNI).</p><p><strong>Methods: </strong>A cross-sectional analysis was performed on individuals with mild cognitive impairment. Key biomarkers assessed included plasma p-tau217, CSF p-tau181, CSF Aβ42, and amyloid PET imaging, alongside clinical assessments using the Clinical Dementia Rating (CDR) and the Alzheimer's Disease Assessment Scale (ADAS).</p><p><strong>Results: </strong>Plasma p-tau217 showed the strongest correlation with amyloid-β deposition and clinical scores (Adjusted R<sup>2</sup> = 0.53 for ADAS, 0.51 for CDR), outperforming CSF Aβ42 and CSF p-tau181.</p><p><strong>Discussion: </strong>These results suggest that plasma p-tau217 may serve as a more accurate, cost-effective, and non-invasive alternative to CSF biomarkers and PET imaging. Its superior predictive power highlights its potential in routine clinical settings for early diagnosis and monitoring of AD progression, addressing key challenges in accessibility and patient compliance associated with current diagnostic methods.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486070/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
RPS19 and RPL5 Haploinsufficient Models Reveal Divergent Ribosomal Subunit Controls of Fetal Hematopoiesis. RPS19和RPL5单倍体不足模型揭示胎儿造血的不同核糖体亚基控制。
Research square Pub Date : 2025-09-26 DOI: 10.21203/rs.3.rs-7563799/v1
Lionel Blanc, Yuefeng Tang, Te Ling, Rashid Mehmood, Alexis Bertrand, Julien Papoin, Mushran Khan, Riaz Rao, Jianing Xu, Vincent Schulz, James Palis, Laurie Steiner, Betsy Barnes, YongRui Zou, Philippe Marambaud, Robert Signer, Irene Roberts, Deena Iskander, Leonard Zon, Senthil Bhoopalan, Mitchell Weiss, Jeffrey Lipton, Patrick Gallagher, Narla Mohandas, Naomi Taylor, Sebastien Durand, John Crispino
{"title":"RPS19 and RPL5 Haploinsufficient Models Reveal Divergent Ribosomal Subunit Controls of Fetal Hematopoiesis.","authors":"Lionel Blanc, Yuefeng Tang, Te Ling, Rashid Mehmood, Alexis Bertrand, Julien Papoin, Mushran Khan, Riaz Rao, Jianing Xu, Vincent Schulz, James Palis, Laurie Steiner, Betsy Barnes, YongRui Zou, Philippe Marambaud, Robert Signer, Irene Roberts, Deena Iskander, Leonard Zon, Senthil Bhoopalan, Mitchell Weiss, Jeffrey Lipton, Patrick Gallagher, Narla Mohandas, Naomi Taylor, Sebastien Durand, John Crispino","doi":"10.21203/rs.3.rs-7563799/v1","DOIUrl":"10.21203/rs.3.rs-7563799/v1","url":null,"abstract":"<p><p>Diamond Blackfan anemia syndrome (DBAS) is a congenital ribosomopathy caused by haploinsufficiency of ribosomal proteins (RPs), but how RP stoichiometry and activity regulates erythroid development remains enigmatic. Using novel <i>in vivo</i> models, we uncover strikingly divergent functions for the small and large ribosomal subunit proteins RPS19 and RPL5 in fetal hematopoiesis. While RPL5 haploinsufficiency causes hematopoietic stem and progenitor cell (HSPC) accumulation and prenatal lethality via p53-mediated ferroptosis of mature erythroid progenitors, RPS19 haploinsufficiency leads to HSPC depletion and impaired erythroid expansion through p53-dependent apoptosis. The latter is accompanied by translational and transcriptional dysregulation, including the upregulation of <i>RUNX1,</i> which is also observed in RPS- haploinsufficient DBAS patients. Importantly, <i>Runx1</i> deletion in RPS19-haploinsufficient mice partially rescues HSPC numbers. These findings reveal subunit-specific RP functions in controlling fetal hematopoiesis and demonstrate how imbalanced RP stoichiometry disrupts developmental programs, providing crucial mechanistic insights into DBAS pathogenesis and the basis for its clinical heterogeneity.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486077/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CD1d+ Goblet Cells Expand Colon-Resident Immature, Intermediate and Differentiated iNKT Cells to Limit Colitis. CD1d+杯状细胞扩增结肠未成熟、中间和分化的iNKT细胞以限制结肠炎。
Research square Pub Date : 2025-09-25 DOI: 10.21203/rs.3.rs-7603392/v1
Rodney Newberry, Vini John, Bibiana Barrios, Jacqueline Wang, Sreeram Udayan, Alexandria Floyd, Kathryn Knoop, Elisabeth Joyce, Ellen Schill, Shushma Sundas, Keely McDonald, Reyka Jayasinghe, Melissa Mavers, Richard Blumberg, Chyi Hsieh, Brigida Rusconi
{"title":"CD1d+ Goblet Cells Expand Colon-Resident Immature, Intermediate and Differentiated iNKT Cells to Limit Colitis.","authors":"Rodney Newberry, Vini John, Bibiana Barrios, Jacqueline Wang, Sreeram Udayan, Alexandria Floyd, Kathryn Knoop, Elisabeth Joyce, Ellen Schill, Shushma Sundas, Keely McDonald, Reyka Jayasinghe, Melissa Mavers, Richard Blumberg, Chyi Hsieh, Brigida Rusconi","doi":"10.21203/rs.3.rs-7603392/v1","DOIUrl":"https://doi.org/10.21203/rs.3.rs-7603392/v1","url":null,"abstract":"<p><p>Invariant Natural Killer T (iNKT) cells recognize glycolipid antigens presented on CD1d and rapidily respond to direct immune responses. iNKT cells develop in the thymus and migrate to peripheral tissues in what has been presumed to be differentiated/committed states. Accordingly, colonic iNKT cells are established in early life, considered to remain 'fixed' post-weaning, and determine life-long colitis susceptibility. Using single cell RNA sequencing (scRNA-seq), we demonstrate that humans and mice contain colonic iNKT populations transcriptionally resembling immature and intermediate thymic iNKT precursors. Contrary to prevailing paradigms, we demonstrate colonic iNKT cell populations expand in adult mice when CD1d expressing colonic goblet cells form goblet cell-associated antigen passages. Expansion preferentially affected intermediate iNKT cells, was durable, and protective in a colitis model. These studies reveal that the adult colon harbors iNKT cells with retained plasticity and uncover a novel role for goblet cells as unconventional antigen presenting cells regulating this axis.</p>","PeriodicalId":519972,"journal":{"name":"Research square","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12486123/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145215026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Persistent mTORC1 activation underlies sex dimorphic progression of MASLD in mice with hepatocyte prohibitin-1 deficiency. 在肝细胞抑制素-1缺乏的小鼠中,持续的mTORC1激活是MASLD性别二态进展的基础。
Research square Pub Date : 2025-09-25 DOI: 10.21203/rs.3.rs-7481614/v1
Amany A Alowaisi, Jolonda C Mahoney, Ran Huo, Islam A Berdaweel, Rachel A Crawford, Kendall J Mallaro, Jared M McLendon, Ethan J Anderson
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