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Prolonged premature rupture of membranes with increased risk of infection is associated with gut accumulation of Pseudomonas from the environment 胎膜早破时间过长，感染风险增加，与环境中假单胞菌在肠道的积累有关
Computational and Structural Biotechnology Journal Pub Date : 2024-07-01 DOI: 10.1016/j.csbj.2024.07.007
Quanhang Xiang, Xudong Yan, Xing Shi, Yi’e Huang, Lingfeng Li, Jiacheng Zhong, Tingting Xu, Shaohui Tang, Wei Shi, Kai Zhou
{"title":"Prolonged premature rupture of membranes with increased risk of infection is associated with gut accumulation of Pseudomonas from the environment","authors":"Quanhang Xiang, Xudong Yan, Xing Shi, Yi’e Huang, Lingfeng Li, Jiacheng Zhong, Tingting Xu, Shaohui Tang, Wei Shi, Kai Zhou","doi":"10.1016/j.csbj.2024.07.007","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.07.007","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"23 33","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141700179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Strengths and limitations of web servers for the modeling of TCRpMHC complexes 用于 TCRpMHC 复合物建模的网络服务器的优势和局限性
Computational and Structural Biotechnology Journal Pub Date : 2024-07-01 DOI: 10.1016/j.csbj.2024.06.028
Hoa Nhu Le, Martiela Vaz de Freitas, D. Antunes
{"title":"Strengths and limitations of web servers for the modeling of TCRpMHC complexes","authors":"Hoa Nhu Le, Martiela Vaz de Freitas, D. Antunes","doi":"10.1016/j.csbj.2024.06.028","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.028","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"475 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141708012","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PidTools: Algorithm and Web Tools for Crop Pedigree Identification Analysis PidTools：用于作物系谱鉴定分析的算法和网络工具
Computational and Structural Biotechnology Journal Pub Date : 2024-07-01 DOI: 10.1016/j.csbj.2024.07.004
Yunlong Zhang, Yikun Zhao, Shipeng Ma, Rui Wang, Chunxiao Zhang, Hongli Tian, Yongxue Huo, Yaming Fan, Hongmei Yi, Yawei Liu, Jianrong Ge, Xiaohui Li, Jiuran Zhao, Fengge Wang
{"title":"PidTools: Algorithm and Web Tools for Crop Pedigree Identification Analysis","authors":"Yunlong Zhang, Yikun Zhao, Shipeng Ma, Rui Wang, Chunxiao Zhang, Hongli Tian, Yongxue Huo, Yaming Fan, Hongmei Yi, Yawei Liu, Jianrong Ge, Xiaohui Li, Jiuran Zhao, Fengge Wang","doi":"10.1016/j.csbj.2024.07.004","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.07.004","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"48 29","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141689709","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A Heterogeneous Information Network Learning model with Neighborhood-level Structural Representation for Predicting lncRNA-miRNA Interactions 用于预测 lncRNA-miRNA 相互作用的具有邻域级结构表示的异质信息网络学习模型
Computational and Structural Biotechnology Journal Pub Date : 2024-07-01 DOI: 10.1016/j.csbj.2024.06.032
Bo-Wei Zhao, Xiaorui Su, Yue Yang, Dong-Xu Li, Guo-Dong Li, Pengwei Hu, Xin Luo, Lun Hu
{"title":"A Heterogeneous Information Network Learning model with Neighborhood-level Structural Representation for Predicting lncRNA-miRNA Interactions","authors":"Bo-Wei Zhao, Xiaorui Su, Yue Yang, Dong-Xu Li, Guo-Dong Li, Pengwei Hu, Xin Luo, Lun Hu","doi":"10.1016/j.csbj.2024.06.032","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.032","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"41 23","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141709648","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Simulation- and AI-directed optimization of 4,6-substituted 1,3,5-triazin-2(1H)-ones as inhibitors of human DNA topoisomerase IIα 模拟和人工智能优化 4,6-取代的 1,3,5-三嗪-2(1H)-酮作为人类 DNA 拓扑异构酶 IIα 的抑制剂
Computational and Structural Biotechnology Journal Pub Date : 2024-07-01 DOI: 10.1016/j.csbj.2024.06.037
Barbara Herlah, Tjaša Goričan, Nika Strašek Benedik, S. Grdadolnik, Izidor Sosič, Andrej Perdih
{"title":"Simulation- and AI-directed optimization of 4,6-substituted 1,3,5-triazin-2(1H)-ones as inhibitors of human DNA topoisomerase IIα","authors":"Barbara Herlah, Tjaša Goričan, Nika Strašek Benedik, S. Grdadolnik, Izidor Sosič, Andrej Perdih","doi":"10.1016/j.csbj.2024.06.037","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.037","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"9 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141704376","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Free energy landscape of the PI3Kα C-terminal activation PI3Kα C 端激活的自由能谱
Computational and Structural Biotechnology Journal Pub Date : 2024-07-01 DOI: 10.1016/j.csbj.2024.07.010
Danai-Maria Kotzampasi, Michail Papadourakis, John E. Burke, Zoe Cournia
{"title":"Free energy landscape of the PI3Kα C-terminal activation","authors":"Danai-Maria Kotzampasi, Michail Papadourakis, John E. Burke, Zoe Cournia","doi":"10.1016/j.csbj.2024.07.010","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.07.010","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"3 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141701514","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
GeTeSEPdb: A comprehensive database and online tool for the identification and analysis of gene profiles with temporal-specific expression patterns GeTeSEPdb：用于识别和分析具有时间特异性表达模式的基因图谱的综合数据库和在线工具
Computational and Structural Biotechnology Journal Pub Date : 2024-06-01 DOI: 10.1016/j.csbj.2024.06.003
Ni Kuang, Qinfeng Ma, Xiao Zheng, Xuehang Meng, Zhaoyu Zhai, Qiang Li, Jianbo Pan
{"title":"GeTeSEPdb: A comprehensive database and online tool for the identification and analysis of gene profiles with temporal-specific expression patterns","authors":"Ni Kuang, Qinfeng Ma, Xiao Zheng, Xuehang Meng, Zhaoyu Zhai, Qiang Li, Jianbo Pan","doi":"10.1016/j.csbj.2024.06.003","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.003","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"32 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141400343","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A hypoxia-derived gene signature to suggest cisplatin-based therapeutic responses in patients with cervical cancer 提示宫颈癌患者顺铂治疗反应的低氧衍生基因特征
Computational and Structural Biotechnology Journal Pub Date : 2024-06-01 DOI: 10.1016/j.csbj.2024.06.007
Jin Fang, Ying Wang, Chen Li, Weixiao Liu, Wannan Wang, Xuewei Wu, Yang Wang, Shuixin Zhang, Jing Zhang
{"title":"A hypoxia-derived gene signature to suggest cisplatin-based therapeutic responses in patients with cervical cancer","authors":"Jin Fang, Ying Wang, Chen Li, Weixiao Liu, Wannan Wang, Xuewei Wu, Yang Wang, Shuixin Zhang, Jing Zhang","doi":"10.1016/j.csbj.2024.06.007","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.007","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"86 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141411600","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gene choice in cancer cells is exclusive in ion transport but concurrent in DNA replication 癌细胞中的基因选择在离子传输中是排他性的，但在 DNA 复制中却是并发的
Computational and Structural Biotechnology Journal Pub Date : 2024-06-01 DOI: 10.1016/j.csbj.2024.06.004
Samuel Mondal, Attila Becskei
{"title":"Gene choice in cancer cells is exclusive in ion transport but concurrent in DNA replication","authors":"Samuel Mondal, Attila Becskei","doi":"10.1016/j.csbj.2024.06.004","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.004","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"1 3","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141404376","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Discovering Novel Cathepsin L Inhibitors from Natural Products Using Artificial Intelligence 利用人工智能从天然产品中发现新型 Cathepsin L 抑制剂
Computational and Structural Biotechnology Journal Pub Date : 2024-06-01 DOI: 10.1016/j.csbj.2024.06.009
Qi Li, Sien Zhou, Hanna Kim, Hao Wang, Juan-Juan Zhu, Jin-Kui Yang
{"title":"Discovering Novel Cathepsin L Inhibitors from Natural Products Using Artificial Intelligence","authors":"Qi Li, Sien Zhou, Hanna Kim, Hao Wang, Juan-Juan Zhu, Jin-Kui Yang","doi":"10.1016/j.csbj.2024.06.009","DOIUrl":"https://doi.org/10.1016/j.csbj.2024.06.009","url":null,"abstract":"","PeriodicalId":505673,"journal":{"name":"Computational and Structural Biotechnology Journal","volume":"21 4","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141404735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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