{"title":"Identifying Retinopathy in Optical Coherence Tomography Images with Less Labeled Data via Contrastive Graph Regularization","authors":"Songqi Hu, Hongying Tang, Yuemei Luo","doi":"10.1364/boe.532482","DOIUrl":"https://doi.org/10.1364/boe.532482","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"44 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141799014","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Khalid Alnafisah, Amit Ranjan, Sushant P Sahu, Jianhua Chen, Sarah Alhejji, Alexandra Noël, M. Gartia, Supratik Mukhopadhyay
{"title":"Machine Learning for Automated Classification of Lung Collagen in a Urethane-Induced Lung Injury Mouse Model","authors":"Khalid Alnafisah, Amit Ranjan, Sushant P Sahu, Jianhua Chen, Sarah Alhejji, Alexandra Noël, M. Gartia, Supratik Mukhopadhyay","doi":"10.1364/boe.527972","DOIUrl":"https://doi.org/10.1364/boe.527972","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"53 49","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141799698","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Antoine Rivail, Teresa Araújo, U. Schmidt-Erfurth, H. Bogunović
{"title":"Pretraining of 3D image segmentation models for retinal OCT using denoising-based self-supervised learning","authors":"Antoine Rivail, Teresa Araújo, U. Schmidt-Erfurth, H. Bogunović","doi":"10.1364/boe.524603","DOIUrl":"https://doi.org/10.1364/boe.524603","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"26 4","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141805842","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jian Liu, Yaping Shi, Zhaoyu Gong, Y. Zhang, Ruikang K Wang
{"title":"Adaptive contour-tracking to aid wide-field swept-source optical coherence tomography imaging of large object with uneven surface topology","authors":"Jian Liu, Yaping Shi, Zhaoyu Gong, Y. Zhang, Ruikang K Wang","doi":"10.1364/boe.533399","DOIUrl":"https://doi.org/10.1364/boe.533399","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"63 51","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141806745","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Momoka Sugimura, Kenneth Marcelino, Rafael Romero, Jingwei Zhao, Yongjun Kim, Ameer Nessaee, Kyungjo Kim, Delaney B Stratton, Clara Curiel-Lewandrowski, Jason Garfinkel, Gene Rubinstein, Dongkyun Kang
{"title":"High-speed reflectance confocal microscopy using speckle modulation","authors":"Momoka Sugimura, Kenneth Marcelino, Rafael Romero, Jingwei Zhao, Yongjun Kim, Ameer Nessaee, Kyungjo Kim, Delaney B Stratton, Clara Curiel-Lewandrowski, Jason Garfinkel, Gene Rubinstein, Dongkyun Kang","doi":"10.1364/boe.531577","DOIUrl":"https://doi.org/10.1364/boe.531577","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"6 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141813936","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jiaming Cao, J. Gorecki, Robin Dale, Chileab Redwood-Sawyerr, C. Kontoravdi, K. Polizzi, Christopher J Rowlands, Hamid Dehghani
{"title":"Fluorescence Diffuse Optical Monitoring of Bioreactors: A Hybrid Deep Learning and Model-Based Approach for Tomography","authors":"Jiaming Cao, J. Gorecki, Robin Dale, Chileab Redwood-Sawyerr, C. Kontoravdi, K. Polizzi, Christopher J Rowlands, Hamid Dehghani","doi":"10.1364/boe.529884","DOIUrl":"https://doi.org/10.1364/boe.529884","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"30 12","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141813653","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jiahe Cui, Maria Villamil, Allie Schneider, Penny Lawton, Laura Young, Martin J. Booth, Hannah E. Smithson
{"title":"Extended-Period AOSLO Imaging in the Living Human Retina without Pupil Dilation: A Feasibility Study","authors":"Jiahe Cui, Maria Villamil, Allie Schneider, Penny Lawton, Laura Young, Martin J. Booth, Hannah E. Smithson","doi":"10.1364/boe.531808","DOIUrl":"https://doi.org/10.1364/boe.531808","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"34 24","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141814303","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jonna Kangasniemi, Meghdoot Mozumder, A. Pulkkinen, T. Tarvainen
{"title":"Stochastic Gauss-Newton method for estimating absorption and scattering in optical tomography with the Monte Carlo method for light transport","authors":"Jonna Kangasniemi, Meghdoot Mozumder, A. Pulkkinen, T. Tarvainen","doi":"10.1364/boe.528666","DOIUrl":"https://doi.org/10.1364/boe.528666","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"32 12","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141816905","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Cross-wavelength Calibrating Method for Real-time Imaging of Tissue Optical Properties using Frequency-Domain Diffuse Optical Spectroscopy","authors":"Thao Pham, lina lin wei, Darren Roblyer","doi":"10.1364/boe.529551","DOIUrl":"https://doi.org/10.1364/boe.529551","url":null,"abstract":"","PeriodicalId":505333,"journal":{"name":"Biomedical Optics Express","volume":"31 20","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141816918","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}