Journal of Cave and Karst Studies最新文献

{"title":"Identification of fungi from soil and sediment in Jefriz Cave; the first survey in a cave from Iran","authors":"A. Habibi, B. Safaiefarahani","doi":"10.4311/2019MB0145","DOIUrl":"https://doi.org/10.4311/2019MB0145","url":null,"abstract":"The aim of this study was to characterize the mycobiota in soil and sediment samples of Jefriz cave in Kerman, Iran. During 2018−2019, the culturable mycobiota from several sites within the Jefriz cave, resulted in 82 fungal isolates. Morphological characteristics of the isolates, as well as molecular sequence data, were used for species identifications. The fungi were identified as species of Fusarium, Fusicolla, Geomyces (Pseudogymnoascus), Humicola, Chalastospora, Penicillium, Aspergillus, Epiciccum, Podospora and Mucor. The most prevalent was Aspergillus spelunceus, followed by Geomyces pannorum and Humicola grisea. The majority of these species have been reported as cave residents in previous studies of cave environments. Our data showed that the fungal community composition varied between the samples from the entrance and less visited sites deeper in the cave. This study is the first cave mycological investigation in Iran, and one of the identified species is reported for the first time from a cave.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"116 1","pages":"71-77"},"PeriodicalIF":0.9,"publicationDate":"2021-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89575953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Caecidotea burkensis, new species, a unique subterranean isopod from Burke’s Garden, with a synthesis of the biogeography and evolution of southwestern Virginia asellids","authors":"S. Lewis, J. Lewis, Wil Orndorff","doi":"10.4311/2020LSC0126","DOIUrl":"https://doi.org/10.4311/2020LSC0126","url":null,"abstract":"Caecidotea burkensis, a new species of subterranean asellid isopod, is described and illustrated from material collected from Lawson Cave, in Burke’s Garden, Tazewell County, Virginia. The type-locality in Burke’s Garden is located within the highest mountain basin in the southern Appalachians. Burke’s Garden is a unique, geologically isolated area encompassing one of the headwater streams of the New River basin. Phylogenetically, the isopod is a member of the forbesi Group, a clade comprised primarily of epigean species. The complex mountain valleys and coves of southwestern Virginia are an area of intense speciation among asellids that have produced a bizarre array of cavernicolous species belonging to groups of otherwise epigean isopods. In addition to a few subterranean species of the Caecidotea cannula and stygia Groups, the Lirceus hargeri Group possesses over a dozen species endemic to caves and springs in the region, mostly only now in the process of being discovered and described. With so much species richness, syntopy of two, or even three, asellid species is commonplace in caves and springs in southwestern Virginia.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"415 1","pages":"78-87"},"PeriodicalIF":0.9,"publicationDate":"2021-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76600835","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"An underworld tailored to tourists: A dragon, a photo-model, and a bio-indicator","authors":"Ivo Lučić","doi":"10.4311/2018SS0106","DOIUrl":"https://doi.org/10.4311/2018SS0106","url":null,"abstract":"The history of studies of a subterranean tailed amphibian, known as the olm or proteus (Proteus anguinus), is a colorful indicator of the changing view of the world beneath our feet. Throughout history, the underground has been presented as other worldly inhabited by life not of this world. At first, caves were the habitat of ghosts and spirtits, and then as a symbol for hell with all its attributes. The olm, in light of this prominant worldview, is discussed here, in which its status changed from that of a mythical dragon, to a photo-model, to a biological indicator of environmental health. The mix of these roles, with which the modern notion of this animal is presented, is mostly generated by the experience of tourguides in Postojna Cave in Slovenia. For a long time, Postojna was the only place that the wider public recognized as a home for proteus. This clearly shows the need to analyze the popular media constructions of environment.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"89 1","pages":"57-65"},"PeriodicalIF":0.9,"publicationDate":"2021-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80211228","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Glacier caves: a globally threatened subterranean biome","authors":"F. Howarth","doi":"10.4311/2019LSC0132","DOIUrl":"https://doi.org/10.4311/2019LSC0132","url":null,"abstract":"Caves and cave-like voids are common features within and beneath glaciers. The physical environment is harsh and extreme, and often considered barren and devoid of life. However, accumulating evidence indicates that these caves may support a diverse invertebrate fauna with species endemic to each region. As glaciers continue to disappear at an alarming rate due to global warming, they take their largely unknown fauna with them. Thus, glacier caves may harbor one of the most endangered ecosystems globally, and yet their biodiversity is among the least studied or known. Faunal surveys and ecological studies are urgently needed before all examples are lost.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"2 1","pages":"66-70"},"PeriodicalIF":0.9,"publicationDate":"2021-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88992304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Dating and interpretation of recent clastic sediments in an urban cave","authors":"E. Hart","doi":"10.4311/2019ES0141","DOIUrl":"https://doi.org/10.4311/2019ES0141","url":null,"abstract":"Capshaw Cave functions as a major stormwater runoff channel for the city of Cookeville, Tennessee, receiving inputs from several large sinkholes. Sediments deposited in the cave reflect the history of erosion and runoff from the city as it grew over the last century. At various locations in the cave, 1 m thick sequences of flood-deposited, laminated fine sediments were observed along the modern stream. Alternating laminations observed in the upper 40 cm of the sediment profile varied between 0.5 cm thick (10Y 7/6 yellow, fine sand) and 2.0 cm thick (10Y 3/2 very dark grayish brown silty sand) layers. Based on measurements of 137Cs activity, the upper 35 cm of sediment was deposited between 1963 (the peak year of 137Cs fallout from nuclear testing) and 2013 (the year samples were collected), at an average rate of 0.7 cm y1. A total of 23 alternating pairs of layers indicate an average flood recurrence interval of 2.2 years between 1963 and 2013. Total Pb concentrations measured in cave sediments showed a peak at the 45 cm depth, suggesting that sediments above this level were deposited after the decline in Pb emissions in the 1970s, and showing general agreement with the timing of deposition suggested by 137Cs. Below 40 cm, the dark silty sand layers were fewer in number and increased in thickness (up to 10 cm), possibly due to changes in cave hydrology or sediment erosion from the surrounding watershed. These findings suggest that, before the 1960s, sedimentation rates were higher and floods were less frequent. After the 1960s, sedimentation rates decreased and floods became more common, probably as a result of urbanization in the watershed.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"1 1","pages":"20-28"},"PeriodicalIF":0.9,"publicationDate":"2021-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82235844","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Microbiome of Grand Canyon Caverns, a dry sulfuric karst cave in Arizona, supports diverse extremo-philic bacterial and archaeal communities","authors":"Ray Keeler, B. Lusk","doi":"10.4311/2019MB0126","DOIUrl":"https://doi.org/10.4311/2019MB0126","url":null,"abstract":"We analyzed the microbial community of multicolored speleosol deposits found in Grand Canyon Caverns, a dry sulfuric karst cave in northwest Arizona, USA. Underground cave and karst systems harbor a great range of microbial diversity; however, the inhabitants of dry sulfuric karst caves, including extremophiles, remain poorly understood. Understanding the microbial communities inhabiting cave and karst systems is essential to provide information on the multidirectional feedback between biology and geology, to elucidate the role of microbial biogeochemical processes on cave formation, and potentially aid in the development of biotechnology and pharmaceuticals. Based on the V4 region of the 16S rRNA gene, the microbial community was determined to consist of 2207 operational taxonomic units (OTUs) using species-level annotations, representing 55 phyla. The five most abundant Bacteria were Actinobacteria 51.3  35.4 %, Proteobacteria 12.6  9.5 %, Firmicutes 9.8  7.3 %, Bacteroidetes 8.3  5.9 %, and Cyanobacteria 7.1  7.3 %. The relative abundance of Archaea represented 1.1  0.9 % of all samples and 0.2  0.04 % of samples were unassigned. Elemental analysis found that the composition of the rock varied by sample and that calcium (6200  3494 ppm), iron (1141 ± 1066 ppm), magnesium (25  17 ppm), and phosphorous (37  33 ppm) were the most prevalent elements detected across all samples. Furthermore, carbon, hydrogen, and nitrogen were found to compose 4.7  4.9 %, 0.3  0.4 %, and 0.1  0.1 % of samples, respectively. Finally, Raman spectra compared to the RRUFF Project database using CrystalSleuth found that the mineral composition of the speleosol consisted of calcite, hematite, paraspurrite, quartz, and trattnerite. These data suggest that dry sulfuric karst caves can harbor robust microbial communities under oligotrophic, endolithic, and troglophilic conditions.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"1 1","pages":"44-56"},"PeriodicalIF":0.9,"publicationDate":"2021-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84294708","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Cave radon exposure, dose, dynamics and mitigation","authors":"C. Waring, S. Hankin, S. Solomon, Stephen Long, A. Yule, Robert Blackley, S. Werczynski, A. Baker","doi":"10.4311/2019ES0124","DOIUrl":"https://doi.org/10.4311/2019ES0124","url":null,"abstract":"Many caves around the world have very high concentrations of naturally occurring 222Rn that may vary dramatically with seasonal and diurnal patterns. For most caves with a variable seasonal or diurnal pattern, 222Rn concentration is driven by bi-directional convective ventilation, which responds to external temperature contrast with cave temperature. Cavers and cave workers exposed to high 222Rn have an increased risk of contracting lung cancer. The International Commission on Radiological Protection (ICRP) has re-evaluated its estimates of lung cancer risk from inhalation of radon progeny (ICRP 115) and for cave workers the risk may now (ICRP 137) be 4–6 times higher than previously recognized. Cave Guides working underground in caves with annual average 222Rn activity  1,000 Bq m3 and default ICRP assumptions (2,000 workplace hours per year, equilibrium factor F  0.4, dose conversion factor DCF  14 μSv (kBq h m3)1 could now receive a dose of  20 mSv y1. Using multiple gas tracers (dCCO2, Rn and N2O), linked weather, source gas flux chambers, and convective air flow measurements a previous study unequivocally identified the external soil above Chifley Cave as the source of cave 222Rn. If the source of 222Rn is external to the cave, a strategy to lower cave 222Rn by passively decreasing summer pattern convective ventilation, which draws 222Rn into caves, is possible without harming the cave environment. A small net annual average temperature difference (warmer cave air) due to geothermal heat flux produces a large net annual volumetric air flow bias (2–5:1) favoring a winter ventilation pattern that flushes Rn from caves with ambient air. Rapid anthropogenic climate change over decades may heat the average annual external temperature relative to the cave temperature that is stabilized by the thermal inertia of the large rock mass. Relative external temperature increases due to climate change (Jenolan Caves, 2008–2018, 0.17°C) reduces the winter pattern air flow bias and increases Rn concentration in caves.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"10 1","pages":"1-19"},"PeriodicalIF":0.9,"publicationDate":"2021-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84882488","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The fauna of caves and other subter-ranean habitats of North Carolina, USA","authors":"Cato Holler, Jonathan D. Mays, M. Niemiller","doi":"10.4311/2019lsc0133","DOIUrl":"https://doi.org/10.4311/2019lsc0133","url":null,"abstract":"Over 1,500 caves have been documented in North Carolina, however, cave fauna in the Blue Ridge Mountains and Piedmont regions of North Carolina have been overlooked historically compared to the cave-rich karst terrains in the Appalachian Valley and Ridge and Interior Low Plateau to the west. Here, we provide the first comprehensive faunal list of caves and other subterranean habitats in the state based on over 40 years of periodic surveys and compilation of literature, biodiversity databases, and museum records. We report 475 occurrences from 127 caves, springs, and wells in 29 counties, representing 5 phyla, 17 classes, 43 orders, 90 families, 124 genera, and at least 164 species. Vertebrate fauna comprised 32 species, including 4 fishes, 9 salamanders, 1 lizard, 4 snakes, 2 birds, and 12 mammals (8 bats). Diverse invertebrate groups included spiders (11 families and 18 genera), springtails (7 families and 9 genera), segmented worms (3 families and 8 genera), and snails (6 families and 9 genera). At least 25 taxa are troglobites/ stygobites (cave obligates), including 5 species of cave flatworms, 5 cave springtails, and 5 cave amphipods. Most troglobitic/stygobitic fauna documented in this study are endemic to North Carolina. Counties with the greatest cave biodiversity include Rutherford, McDowell, Swain, Henderson, Polk, and Avery counties. Over 20 species documented are of conservation concern, including 14 troglobites and 3 federally-listed bats. Although not as diverse as adjacent states, caves and other subterranean habitats in North Carolina support a diverse community of invertebrates and vertebrates. Our review serves as a base line for future cave biological surveys in the state and highlights the importance of subterranean habitats for North Carolina biodiversity. Introduction Caves and associated subterranean habitats are home to a unique and taxonomically diverse assemblage of invertebrate and vertebrate organisms in North America. In addition to the more than 1,350 species that are obligate inhabitants of terrestrial and aquatic subterranean habitats in the United States (i.e., troglobites and stygobites) (Niemiller et al., 2019), hundreds of other species use caves on an occasional to semi-permanent basis. Most of this subterranean diversity is known from the ten major karst biogeographic regions defined in the United States that are associated with carbonate exposures (Culver et al., 2003; Hobbs, 2012). Several additional smaller karst regions exist, but these regions have received comparatively little attention from biospeleologists. The fauna of caves and associated subterranean habitats in the Blue Ridge Mountains and Piedmont physiographic provinces of North Carolina has been grossly understudied compared to subterranean fauna of the cave-rich Appalachian and Interior Low Plateau karst to the west of the Appalachian Mountains in Tennessee, Alabama, Georgia, and Virginia. In contrast to most cave systems in the Appalachians an","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"30 1","pages":"221-260"},"PeriodicalIF":0.9,"publicationDate":"2020-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74785095","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Karst sinkholes as foci of biodiversity in the Hoosier National Forest","authors":"J. Lewis, M. Milne, C. Stephen, Daniel C. Dourson","doi":"10.4311/2020lsc0103","DOIUrl":"https://doi.org/10.4311/2020lsc0103","url":null,"abstract":"Sinkholes are a well-known, but poorly studied, aspect of karst environments. In 2015, the Hoosier National Forest in southern Indiana, USA, commissioned a study of sinkhole habitats to assess their ecological role. The ecosystems of 26 sinkholes were evaluated to determine if sinkhole floor biological communities and species richness were a function of the surrounding plant community. Each sinkhole was sampled four times for five target groups of invertebrates at intervals of approximately three months, for a total of 104 visits. The sampling resulted in finding 140 taxa, including 31 land snails, 14 millipedes, 3 terrestrial isopods, 83 spiders and 9 pseudoscorpions. Of exceptional note were at least 12 new state records and a probable new species of pseudoscorpion. Several of these species appear to be endemic to sinkhole habitats. A link was confirmed between species richness and the surrounding plant community, specifically that the highest biodiversity was found in sinkholes surrounded by native deciduous forest, followed by native glades. Sinkholes in fields from which deciduous forest had been removed possessed markedly decreased species diversity, as did non-native plantings of pines. Sinkhole habitats had a significantly higher species richness than adjacent non-sinkhole control sites. Moreover, the arthropod communities that were found in each sinkhole within each plant community type were different from each other and the surrounding non-sinkhole areas. These data suggest that sinkholes are more than just depressions in epigean landscapes, but possess unique invertebrate communities linked to the surrounding plant community.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"1 1","pages":""},"PeriodicalIF":0.9,"publicationDate":"2020-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75988166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Genesis and evolution of the square soda straws of Dry Cave, West Virginia, USA","authors":"P. Forti, Gregory S. Springer","doi":"10.4311/2019ES0134","DOIUrl":"https://doi.org/10.4311/2019ES0134","url":null,"abstract":"A completely new (sub)type of calcite stalactite, similar to a soda straw but showing an external square shape, has been recently observed within Dry Cave, West Virginia, USA. Though rare speleothems with one or more planar sides (triangular to hexagonal cross sections) have been described in the past, this is the first reported example of a subaerial stalactite-like speleothem with a rhombic parallelepiped structure. More than a dozen examples were observed in the cave. The suggested genetic mechanisms allowing the atypical growth of a parallelepiped seem to be controlled by several boundary conditions that normally preclude their development. Constrained by the specifics of calcite crystallization in descending vadose waters and the morphology of collected (already broken) samples, we hypothesize that an initial very low supersaturation within the feeding tube, together with relatively fast dripping, causes the growth of a normal monocrystalline calcite soda straw with the C axis coincident with the tubular axis and circular cross sections. Calcite precipitation on the outside of the soda straw is possible only if there is a water film flowing on the straw’s external surface. Normally, this external flow will cause the rapid transformation of a tubular straw into a typical, polycrystalline conical stalactite. But in this case, the external feeding film is minimally supersaturated or even absent, which slows epitaxial growth over the pre-existing monocrystalline structure of the soda straw and suppresses radial (polycrystalline) growth of calcite crystals. This induces, in stationary conditions, transformation of the straw into parallel, twinned calcite crystals stacked to form a pyramidal stalactite with rhombic cross sections and an overall tapering angle of <2°. In the most extreme cases, the soda straws are gradually transformed into a seemingly square monocrystalline parallelepiped. The necessary boundary conditions involve a non-stationary distribution of always scarce supersaturated/undersaturated flow over the soda straw, alternating with periods of simple saturation. The controlling factor for the development of conical, pyramidal, and parallelepiped stalactites seems to be the tapering angle. This just outlined genetic mechanism is speculative and should be experimentally tested. Finally, in the few collected samples of the square straws, this shape is often masked by another development step, which probably became active when they were already broken. This final stage was characterized by a sudden increase in supersaturation of epitaxial water, which induced the deposition of a thin layer of polycrystalline calcite that masks, at least partially, the monocrystalline structure of the speleothem.","PeriodicalId":50244,"journal":{"name":"Journal of Cave and Karst Studies","volume":"2011 1","pages":""},"PeriodicalIF":0.9,"publicationDate":"2020-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86327981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}