{"title":"Graph Neural Networks for Predicting Solubility in Diverse Solvents using MolMerger incorporating Solute-solvent Interactions","authors":"Vansh Ramani, Tarak Karmakar","doi":"arxiv-2402.11340","DOIUrl":"https://doi.org/arxiv-2402.11340","url":null,"abstract":"Prediction of solubility has been a complex and challenging physiochemical\u0000problem that has tremendous implications in the chemical and pharmaceutical\u0000industry. Recent advancements in machine learning methods have provided great\u0000scope for predicting the reliable solubility of a large number of molecular\u0000systems. However, most of these methods rely on using physical properties\u0000obtained from experiments and or expensive quantum chemical calculations. Here,\u0000we developed a method that utilizes a graphical representation of\u0000solute-solvent interactions using `MolMerger', which captures the strongest\u0000polar interactions between molecules using Gasteiger charges and creates a\u0000graph incorporating the true nature of the system. Using these graphs as input,\u0000a neural network learns the correlation between the structural properties of a\u0000molecule in the form of node embedding and its physiochemical properties as\u0000output. This approach has been used to calculate molecular solubility by\u0000predicting the Log solubility values of various organic molecules and\u0000pharmaceuticals in diverse sets of solvents.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"27 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139920722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Random features and polynomial rules","authors":"Fabián Aguirre-López, Silvio Franz, Mauro Pastore","doi":"arxiv-2402.10164","DOIUrl":"https://doi.org/arxiv-2402.10164","url":null,"abstract":"Random features models play a distinguished role in the theory of deep\u0000learning, describing the behavior of neural networks close to their\u0000infinite-width limit. In this work, we present a thorough analysis of the\u0000generalization performance of random features models for generic supervised\u0000learning problems with Gaussian data. Our approach, built with tools from the\u0000statistical mechanics of disordered systems, maps the random features model to\u0000an equivalent polynomial model, and allows us to plot average generalization\u0000curves as functions of the two main control parameters of the problem: the\u0000number of random features $N$ and the size $P$ of the training set, both\u0000assumed to scale as powers in the input dimension $D$. Our results extend the\u0000case of proportional scaling between $N$, $P$ and $D$. They are in accordance\u0000with rigorous bounds known for certain particular learning tasks and are in\u0000quantitative agreement with numerical experiments performed over many order of\u0000magnitudes of $N$ and $P$. We find good agreement also far from the asymptotic\u0000limits where $Dto infty$ and at least one between $P/D^K$, $N/D^L$ remains\u0000finite.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"99 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139755558","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Designing three-way entangled and nonlocal two-way entangled single particle states via alternate quantum walks","authors":"Dinesh Kumar Panda, Colin Benjamin","doi":"arxiv-2402.05080","DOIUrl":"https://doi.org/arxiv-2402.05080","url":null,"abstract":"Entanglement with single-particle states is advantageous in quantum\u0000technology because of their ability to encode and process information more\u0000securely than their multi-particle analogs. Three-way and nonlocal two-way\u0000entangled single-particle states are desirable in this context. Herein, we\u0000generate three-way entanglement from an initially separable state involving\u0000three degrees of freedom of a quantum particle, which evolves via a 2D\u0000alternate quantum walk employing a resource-saving single-qubit coin. We\u0000achieve maximum possible values for the three-way entanglement quantified by\u0000the $pi$-tangle between the three degrees of freedom. We also generate optimal\u0000two-way nonlocal entanglement, quantified by the negativity between the\u0000nonlocal position degrees of freedom of the particle. This prepared\u0000architecture using quantum walks can be experimentally realized with a photon.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"40 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139755428","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Asymptotic generalization error of a single-layer graph convolutional network","authors":"O. Duranthon, L. Zdeborová","doi":"arxiv-2402.03818","DOIUrl":"https://doi.org/arxiv-2402.03818","url":null,"abstract":"While graph convolutional networks show great practical promises, the\u0000theoretical understanding of their generalization properties as a function of\u0000the number of samples is still in its infancy compared to the more broadly\u0000studied case of supervised fully connected neural networks. In this article, we\u0000predict the performances of a single-layer graph convolutional network (GCN)\u0000trained on data produced by attributed stochastic block models (SBMs) in the\u0000high-dimensional limit. Previously, only ridge regression on contextual-SBM\u0000(CSBM) has been considered in Shi et al. 2022; we generalize the analysis to\u0000arbitrary convex loss and regularization for the CSBM and add the analysis for\u0000another data model, the neural-prior SBM. We also study the high\u0000signal-to-noise ratio limit, detail the convergence rates of the GCN and show\u0000that, while consistent, it does not reach the Bayes-optimal rate for any of the\u0000considered cases.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"152 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139772982","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Nature-Inspired Local Propagation","authors":"Alessandro Betti, Marco Gori","doi":"arxiv-2402.05959","DOIUrl":"https://doi.org/arxiv-2402.05959","url":null,"abstract":"The spectacular results achieved in machine learning, including the recent\u0000advances in generative AI, rely on large data collections. On the opposite,\u0000intelligent processes in nature arises without the need for such collections,\u0000but simply by online processing of the environmental information. In\u0000particular, natural learning processes rely on mechanisms where data\u0000representation and learning are intertwined in such a way to respect\u0000spatiotemporal locality. This paper shows that such a feature arises from a\u0000pre-algorithmic view of learning that is inspired by related studies in\u0000Theoretical Physics. We show that the algorithmic interpretation of the derived\u0000\"laws of learning\", which takes the structure of Hamiltonian equations, reduces\u0000to Backpropagation when the speed of propagation goes to infinity. This opens\u0000the doors to machine learning studies based on full on-line information\u0000processing that are based the replacement of Backpropagation with the proposed\u0000spatiotemporal local algorithm.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"287 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139755785","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jean-Philippe BouchaudCapital Fund Management & Académie des Sciences
{"title":"Why is the Dynamics of Glasses Super-Arrhenius?","authors":"Jean-Philippe BouchaudCapital Fund Management & Académie des Sciences","doi":"arxiv-2402.01883","DOIUrl":"https://doi.org/arxiv-2402.01883","url":null,"abstract":"The steep increase of the relaxation time of glass forming liquids upon\u0000cooling is traditionally ascribed to an impending entropy crisis: since the\u0000system has \"nowhere to go\", dynamics must come to a halt. This classic\u0000argument, due to Adam & Gibbs, has been bolstered and refined by the\u0000development of the Random First Order Transition (RFOT) theory, which fares\u0000remarkably well at reproducing most salient experimental facts of super-cooled\u0000liquids. All static predictions of RFOT, including the existence of a\u0000point-to-set length and the role of pinning sites, have been vindicated by\u0000detailed numerical simulations. Yet, there is no consensus that the basic\u0000mechanism explaining the glass transition is the one captured by RFOT. Strong\u0000doubts have emerged following the observation that adding or removing kinetic\u0000constraints can change the relaxation time by orders of magnitude, while\u0000leaving thermodynamics unchanged. This is at odds with the idea of a one-to-one\u0000mapping between excess entropy and relaxation time. In the following discussion paper presented at the Solvay conference in\u0000October 2023, we review areas of consensus and dissent of RFOT with other\u0000competing theoretical proposals, and propose possible paths for (partial)\u0000reconciliation. We further argue that extensive numerical simulations of the\u0000non-linear susceptibility of glasses, in particular in the aging regime, should\u0000shed important light on the mechanism at the origin of the super-Arrhenius\u0000behaviour of the relaxation time. In any case, more imagination is still needed\u0000to come up with experimental, theoretical or numerical ideas that would allow\u0000to finally settle the question of why glasses do not flow.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"7 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139755411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tomasz Szołdra, Piotr Sierant, Maciej Lewenstein, Jakub Zakrzewski
{"title":"Catching thermal avalanches in disordered XXZ model","authors":"Tomasz Szołdra, Piotr Sierant, Maciej Lewenstein, Jakub Zakrzewski","doi":"arxiv-2402.01362","DOIUrl":"https://doi.org/arxiv-2402.01362","url":null,"abstract":"We study the XXZ model with a random magnetic field in contact with a weakly\u0000disordered spin chain, acting as a finite thermal bath. We revise Fermi's\u0000golden rule description of the interaction between the thermal bath and the XXZ\u0000spin chain, contrasting it with a non-perturbative quantum avalanche scenario\u0000for the thermalization of the system. We employ two-point correlation functions\u0000to define the extent, $xi_d$, of the thermalized region next to the bath.\u0000Unbounded growth of $xi_d$ proportional to the logarithm of time or faster is\u0000a signature of an avalanche. It signifies the thermalization of the system, as\u0000we confirm numerically for a generic initial state in the ergodic and critical\u0000regimes of the XXZ spin chain. In the many-body localized regime, a clear\u0000termination of avalanches is observed for specifically prepared initial states\u0000and, surprisingly, is not visible for generic initial product states.\u0000Additionally, we extract the localization length of the local integrals of\u0000motion and show that a bath made out of a weakly disordered XXZ chain has a\u0000similar effect on the system as a bath modeled by a Hamiltonian from a Gaussian\u0000Orthogonal Ensemble of random matrices. We also comment on the result of the\u0000earlier study (Phys. Rev. B 108, L020201 (2023)), arguing that the observed\u0000thermalization is due to external driving of the system and does not occur in\u0000the autonomous model. Our work reveals experimentally accessible signatures of\u0000quantum avalanches and identifies conditions under which termination of the\u0000avalanches may be observed.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"38 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139689445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Onset of nonequilibrium in a driven Anderson insulator","authors":"Z. Ovadyahu","doi":"arxiv-2401.16940","DOIUrl":"https://doi.org/arxiv-2401.16940","url":null,"abstract":"The onset of nonequilibrium in a driven Anderson-insulator is identified by\u0000monitoring the system with two-thermometers. Features of nonequilibrium appear\u0000at surprisingly weak drive intensity demonstrating, among other things, that\u0000conductivity may not be a reliable thermometer for ensuring linear-response\u0000conditions. In addition, the spectral contents of the applied field could be\u0000more important to take the system out of equilibrium than its absorbed power.\u0000Ensuing hot-electron transport effects and the nontrivial role phonons play in\u0000driven quantum systems are pointed out.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"71 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139647041","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Anomalous localization in spin-chain with tilted interactions","authors":"Arindam Mallick, Jakub Zakrzewski","doi":"arxiv-2401.14369","DOIUrl":"https://doi.org/arxiv-2401.14369","url":null,"abstract":"The localization properties of a disorder-free spin chain with inhomogeneous\u0000interactions are studied. In particular, we consider interaction strength\u0000growing linearly along the chain for systems with different interaction ranges.\u0000Using exact diagonalization we find the participation ratio of all eigenstates\u0000which allows us to quantify the localization volume in the Hilbert space.\u0000Surprisingly the localization volume changes nonmonotonically with the\u0000interaction range. The model for the infinite interaction range resembles the\u0000Schwinger model of lattice gauge theory in staggered formalism. The model\u0000studied may be implemented in state-of-the-art cold atomic devices and could\u0000reveal hidden features in disorder-free confinement phenomena.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"7 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-01-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139582365","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Localization of Lindbladian Fermions","authors":"Foster Thompson, Yi Huang, Alex Kamenev","doi":"arxiv-2401.14006","DOIUrl":"https://doi.org/arxiv-2401.14006","url":null,"abstract":"We study a Lindbladian generalization of the Anderson model of localization\u0000that describes disordered free fermions coupled to a disordered environment.\u0000From finite size scaling of both eigenvalue statistics and participation ratio,\u0000we identify localization transitions in both the non-Hermitian Lindbladian\u0000spectrum, which governs transient relaxation dynamics, and in the Hermitian\u0000stationary state density matrix. These localization transitions occur at\u0000different critical values of Hamiltonian and dissipative disorder strength,\u0000implying the existence of atypical phases with a mixture of localized and\u0000delocalized features. We find this phenomenon is robust to changes to the value\u0000of the dissipative spectral gap.","PeriodicalId":501066,"journal":{"name":"arXiv - PHYS - Disordered Systems and Neural Networks","volume":"19 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-01-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139582194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}