{"title":"LASA: A Tool for Non-heuristic Alignment of Multiple Sequences","authors":"Ernst Althaus, S. Canzar","doi":"10.1007/978-3-540-70600-7_38","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_38","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"69 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117123957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"GENFOCS - A Comparative Tool on Gene Finding with Sensitivity and Specificity","authors":"M. Anto, G. Gopakumar, A. Nair, I. Ghosh","doi":"10.1007/978-3-540-70600-7_40","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_40","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"60 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129940522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Tree Index to Support Clustering Based Exploratory Data Analysis","authors":"Christian Martin, T. Nattkemper","doi":"10.1007/978-3-540-70600-7_1","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_1","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"130 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123190187","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ulrike Mückstein, Hakim Tafer, S. Bernhart, M. Hernández-Rosales, J. Vogel, P. Stadler, I. Hofacker
{"title":"Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics","authors":"Ulrike Mückstein, Hakim Tafer, S. Bernhart, M. Hernández-Rosales, J. Vogel, P. Stadler, I. Hofacker","doi":"10.1007/978-3-540-70600-7_9","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_9","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"115 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124141775","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Matching Spatial Regions with Combinations of Interacting Gene Expression Patterns","authors":"Jano van Hemert, R. Baldock","doi":"10.1007/978-3-540-70600-7_26","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_26","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"149 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128924942","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Searching for Supermaximal Repeats in Large DNA Sequences","authors":"C. Lian, M. Halachev, Nematollaah Shiri","doi":"10.1007/978-3-540-70600-7_7","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_7","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"6 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132156730","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"An Algorithm for Multiple and Global Alignments","authors":"M. Elloumi, A. Mokaddem","doi":"10.1007/978-3-540-70600-7_37","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_37","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"67 5 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131410991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
I. Wassink, Han Rauwerda, P. V. D. Vet, T. Breit, A. Nijholt
{"title":"E-BioFlow: Different Perspectives on Scientific Workflows","authors":"I. Wassink, Han Rauwerda, P. V. D. Vet, T. Breit, A. Nijholt","doi":"10.1007/978-3-540-70600-7_19","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_19","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"15 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134297574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Computational Method for Reconstructing Gapless Metabolic Networks","authors":"E. Pitkänen, Ari Rantanen, Juho Rousu, E. Ukkonen","doi":"10.1007/978-3-540-70600-7_22","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_22","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"59 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116710722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alireza Hadj Khodabakhshi, Ján Manuch, A. Rafiey, Arvind Gupta
{"title":"A Robust Class of Stable Proteins in the 2D HPC Model","authors":"Alireza Hadj Khodabakhshi, Ján Manuch, A. Rafiey, Arvind Gupta","doi":"10.1007/978-3-540-70600-7_14","DOIUrl":"https://doi.org/10.1007/978-3-540-70600-7_14","url":null,"abstract":"","PeriodicalId":334773,"journal":{"name":"Bioinformatics Research and Development","volume":"28 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115323692","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}