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Practical Applications of Computational Biology & Bioinformatics最新文献

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Computational Tools for the Analysis of 2D-Nuclear Magnetic Resonance Data 二维核磁共振数据分析的计算工具
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_6
B. Pereira, M. Maraschin, Miguel Rocha
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引用次数: 1
Towards a Multivariate Analysis of Genome-Scale Metabolic Models Derived from the BiGG Models Database 对来自BiGG模型数据库的基因组尺度代谢模型的多变量分析
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_14
Alexandre Oliveira, Emanuel Cunha, Fernando Cruz, João Capela, João Sequeira, Marta Sampaio, Óscar Dias
{"title":"Towards a Multivariate Analysis of Genome-Scale Metabolic Models Derived from the BiGG Models Database","authors":"Alexandre Oliveira, Emanuel Cunha, Fernando Cruz, João Capela, João Sequeira, Marta Sampaio, Óscar Dias","doi":"10.1007/978-3-030-86258-9_14","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_14","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"50 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116027385","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Combinatorial Optimization of Succinate Production in Escherichia coli 大肠杆菌产琥珀酸盐的组合优化
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_16
Vítor Pereira, M. Rocha
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引用次数: 0
Recurrent Deep Neural Networks for Enzyme Functional Annotation 酶功能标注的递归深度神经网络
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_7
A. M. Sequeira, Miguel Rocha
{"title":"Recurrent Deep Neural Networks for Enzyme Functional Annotation","authors":"A. M. Sequeira, Miguel Rocha","doi":"10.1007/978-3-030-86258-9_7","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_7","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117076150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
A Comparison of Different Compound Representations for Drug Sensitivity Prediction 药物敏感性预测中不同化合物表征的比较
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_15
Delora Baptista, João Correia, Bruno Pereira, M. Rocha
{"title":"A Comparison of Different Compound Representations for Drug Sensitivity Prediction","authors":"Delora Baptista, João Correia, Bruno Pereira, M. Rocha","doi":"10.1007/978-3-030-86258-9_15","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_15","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"60 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117125719","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
A Hybrid of Bees Algorithm and Regulatory On/Off Minimization for Optimizing Lactate Production 混合蜜蜂算法和调节开/关最小化优化乳酸生产
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_10
Mohd Izzat Yong, M. S. Mohamad, Yee Wen Choon, Weng Howe Chan, H. K. Adli, Khairul Nizar Syazwan Wan Salihin Wong, N. Yusoff, Muhammad Akmal bin Remli
{"title":"A Hybrid of Bees Algorithm and Regulatory On/Off Minimization for Optimizing Lactate Production","authors":"Mohd Izzat Yong, M. S. Mohamad, Yee Wen Choon, Weng Howe Chan, H. K. Adli, Khairul Nizar Syazwan Wan Salihin Wong, N. Yusoff, Muhammad Akmal bin Remli","doi":"10.1007/978-3-030-86258-9_10","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_10","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"21 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126277843","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Computational Methods for the Identification of Genetic Variants in Complex Diseases 复杂疾病遗传变异识别的计算方法
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_1
Débora Antunes, D. Martins, F. Correia, Miguel Rocha, Joel P. Arrais
{"title":"Computational Methods for the Identification of Genetic Variants in Complex Diseases","authors":"Débora Antunes, D. Martins, F. Correia, Miguel Rocha, Joel P. Arrais","doi":"10.1007/978-3-030-86258-9_1","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_1","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"21 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129778454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
BioTMPy: A Deep Learning-Based Tool to Classify Biomedical Literature BioTMPy:基于深度学习的生物医学文献分类工具
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_12
Nuno Alves, Rúben Rodrigues, M. Rocha
{"title":"BioTMPy: A Deep Learning-Based Tool to Classify Biomedical Literature","authors":"Nuno Alves, Rúben Rodrigues, M. Rocha","doi":"10.1007/978-3-030-86258-9_12","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_12","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"23 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121438986","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The pegi3s Bioinformatics Docker Images Project pegi3s生物信息学Docker图像项目
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2021-08-28 DOI: 10.1007/978-3-030-86258-9_4
H. López-Fernández, P. Ferreira, M. Reboiro-Jato, C. Vieira, J. Vieira
{"title":"The pegi3s Bioinformatics Docker Images Project","authors":"H. López-Fernández, P. Ferreira, M. Reboiro-Jato, C. Vieira, J. Vieira","doi":"10.1007/978-3-030-86258-9_4","DOIUrl":"https://doi.org/10.1007/978-3-030-86258-9_4","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"42 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116683257","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Reconciliation of Regulatory Data: The Regulatory Networks of Escherichia coli and Bacillus subtilis 调控数据的调和:大肠杆菌和枯草芽孢杆菌的调控网络
Practical Applications of Computational Biology & Bioinformatics Pub Date : 2020-06-17 DOI: 10.1007/978-3-030-54568-0_16
Diogo Lima, Fernando Cruz, Miguel Rocha, Óscar Dias
{"title":"Reconciliation of Regulatory Data: The Regulatory Networks of Escherichia coli and Bacillus subtilis","authors":"Diogo Lima, Fernando Cruz, Miguel Rocha, Óscar Dias","doi":"10.1007/978-3-030-54568-0_16","DOIUrl":"https://doi.org/10.1007/978-3-030-54568-0_16","url":null,"abstract":"","PeriodicalId":323503,"journal":{"name":"Practical Applications of Computational Biology & Bioinformatics","volume":"6 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124563268","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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