{"title":"A High Resolution Interferometric Fiber-Optic Temperature Sensor \"FOTS\"","authors":"T. Elsarnagawy","doi":"10.1109/CIBEC.2008.4786071","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786071","url":null,"abstract":"This paper introduces an application of a single-mode optical fiber as a temperature sensor. The application is based on the Michelson-interferometer principle. A single mode optical fiber of several meters is loosely wound around a foam cylinder. The interferometric principle used in this work gives the advantage of having the output directly as a digital readout after converting it into electrical signal. The detected number of counts (fringes) directly represents the increase or decrease in temperature. The output of the fiber optic sensor is compared to that of a semiconductor temperature sensor gauge. The correlation between the two sensors is presented. Results from the fiber optic sensor introduced within this article show high sensitivity in the range of 52middot10-4degC, stability and reproducibility. Finally, the obtained sensitivity proved to be very high compared to other techniques used in most published articles of fiber optic temperature sensors. In addition to the high sensitivity the FOTS introduced in this work is versatile and may serve many applications where temperature plays an important role and very small fluctuations have to be registered.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115463458","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Computer-Aided Detection of Benign Tumors of the Female Breast","authors":"M. D. El-Sanosi, A. Habbani, N. Mustafa, A. Hamza","doi":"10.1097/JCE.0b013e31827c3585","DOIUrl":"https://doi.org/10.1097/JCE.0b013e31827c3585","url":null,"abstract":"Breast cancer is considered one of the leading causes of women mortality in the world. The key to improving breast cancer is the early diagnosis of tumors through the use of mammography. Screen-film mammography (SFM) is the most commonly used method in Sudan for the detection of breast cancer. However, SFM has limitations due to the variability among screening radiologists in interpreting mammographic images. In order to overcome these limitations, digital mammography (DM) was introduced. An intelligent computer-aided detection (CAD) system can be very helpful for radiologist in detecting and diagnosing benign tumors earlier and faster than typical screening programs. In this study, a data set of 10 digital mammograms containing benign tumors was presented to four radiologists for diagnosis in order to prove the variability between them. Then, we investigated several statistical features and their combinations in order to determine the best combination for diagnosis. We found that a combination of the mean and median in a MATLAB algorithm is the best combination for mammographic benign tumor detection. Results demonstrate that the CAD algorithms showed more sensitivity than the radiologists in terms of diagnosing benign tumors in digital mammograms.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"22 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116080324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"BioSNI: A Semantic Network Integration Approach for Biological Data","authors":"T. Soliman","doi":"10.1109/CIBEC.2008.4786048","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786048","url":null,"abstract":"Recently, the world is hunting for using life sciences data in solving the problems of fighting hunger in the next coming years. Integrating this data can be useful in areas of agricultural bioinformatics and other disciplines. However, efficient integration techniques must be developed to biological data since biological data has its own challenging characteristics, such as the existence of huge data existence, heterogeneous distributed data, and frequently updated data. In the current work, a semantic network for biological data integration is proposed, utilizing both ontology provided at OBO and atomic data provided at various biological databases to encompass an integrated data layer that can be queried using XQuery. Human and Yeast proteins are used as examples from UniProt release 14, integrated with other protein-related data, such as protein-protein interaction, protein domain, protein function, protein subcellular location, and related chemical reactions.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"243 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116246570","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Establishing an Accredited Medical Equipment Calibration Laboratory","authors":"M. Wahed, S. Samy, M. Montaser","doi":"10.1109/CIBEC.2008.4786109","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786109","url":null,"abstract":"Accreditation is a means of determining the technical competence of laboratories to perform specific types of testing, measurement and calibration. Medical equipments require confirmation that they comply with specifications and safety regulations before they can be used in health care facilities. This paper presents guide lines to establish an Accredited Medical Equipment Calibration Laboratory in Egypt, based on the experience of the Medical Equipment Calibration Lab (MECL) of the Systems And Biomedical Engineering Department (SBME), Cairo University. A description of the calibration program and the requirements for calibration accreditation are explained. General overview of the MECL quality manual and other quality-related documentation is included.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"53 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114441649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Development of Anatomically Realistic Whole-Body Models of Children and their Use in Electromagnetic Dosimetry","authors":"T. Nagaoka, S. Watanabe","doi":"10.1109/CIBEC.2008.4786110","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786110","url":null,"abstract":"Recently, there has been an increased concern regarding the effects of electromagnetic radiation emanating from wireless communication devices on the health of children. In order to determine safe levels of exposure, we intend to use computer simulations and numerical human models to estimate the specific absorption rate (SAR) in young children. However, only a few of the existing numerical models of young children are of the same quality and resolution as anatomically realistic adult models. Therefore, for accurate dosimetry in young children, we have developed anatomically realistic whole-body models using MRI data obtained from healthy three- and seven-year-old volunteers. Our model has a resolution of approximately 2 mm and is segmented into approximately 50 tissues and organs. First, we performed semiautomatic approximate segmentation using an image segmentation tool. Then, detailed segmentation was manually performed by health professionals. Finally, the positions and shapes of the segmented tissues were verified by a pediatric radiologist. The quality of our models is equal to or higher than that of adult models. Our models can be used to perform highly precise numerical simulations for studies on children. In this paper, we also present the basic SAR characteristics of our models at VHF/UHF frequencies.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"167 ","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"120871758","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Study of Nerve Fiber Tracking Methodologies using Diffusion Tensor Magnetic Resonance Imaging","authors":"M.M. Tawfik, Y. Kadah","doi":"10.1109/CIBEC.2008.4786051","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786051","url":null,"abstract":"Neural connectivity studies are extremely important for interpreting functional magnetic resonance imaging (FMRI) data and brain in vivo studies. By assuming that the largest principal axis of the diffusion tensor aligns with the predominant fiber orientation in an MRI voxel, we can obtain 2D or 3D vector fields that represent the fiber orientation at each voxel. An algorithm was developed for tracking brain white matter fibers using diffusion tensor magnetic resonance imaging (DT-MRI), which is the only approach now to non-invasively study the architecture of white matter tracts.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"5 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130224914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"VLSI Synthesis of Heterogeneous and SIRM Fuzzy System for Classification of Diabetic Epilepsy Risk Levels","authors":"R. Harikumar, A. Shanmugam, P. Rajan","doi":"10.1109/CIBEC.2008.4786062","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786062","url":null,"abstract":"The objective of this paper is to design, simulate, and synthesis a simple, suitable and reliable VLSI fuzzy processor for classification of diabetic epilepsy risk levels. The performance of three different fuzzy techniques are analyzed and compared. While designing the fuzzy processor the cerebral blood flow (CBF), EEG signal features and aggregation operators are taken as parameters. The classification of risk level is based on clinical data and observation. Three different fuzzy techniques with minimum rules such as a two input heterogeneous fuzzy technique, single input rule models (SIRM) are analyzed. The parallel architecture is incorporated in this design with independent functional units. These functional units process the data simultaneously by which the processing speed is enhanced. The SIRM fuzzy system with Bell input - Bell output, and Bell input-Triangle output are simulated and synthesized for various values of Cerebral Blood Flow using VHDL. The simulated and synthesized field programmable gated array (FPGA) fuzzy processor closely follows the mat lab version.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"50 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116800564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Digital Color Doppler Signal Processing","authors":"R. H. Gabr, Y. Kadah","doi":"10.1109/CIBEC.2008.4786035","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786035","url":null,"abstract":"In Color Doppler ultrasound imaging system, digital signal processing is mainly based on Hilbert filter and Clutter rejection filters. Hilbert filter is used to filter out the negative frequency component of the real Doppler signal to produce the analytic signal. Clutter rejection filter are used to filter out the low frequency unwanted tissue signals for measurement of the low velocity blood flow. In this paper, two methods for designing a Hilbert filter are implemented. One of these methods is based on shifting sinc function and the other method is window based. In addition, clutter filters are designed using different types of FIR and IIR design methods. The magnitude response of each of the different designed filters is plotted to select the best filter design with the minimum order that reject clutter signals. The assessment is based on the magnitude response specifications. The Hilbert filters results show that the first method is better than other method. The clutter rejection filters results show that IIR filters offer significantly better performance than FIR at the same order. The FIR requires higher order to achieve comparable narrow transition band to IIR. For IIR; Chebyshev II and elliptic types show the best clutter rejection filters.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"9 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123954589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Classification of the Imagination of the Left and Right Hand Movements using EEG","authors":"Mohammed A. Hassan, A. F. Ali, M. Eladawy","doi":"10.1109/CIBEC.2008.4786098","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786098","url":null,"abstract":"Brain-computer interface (BCI) is a new and promising area of research which is assumed to help in solving a lot of problems especially for handicapped people. Detection of the imagination of the left and right hand movements can be used to control a wheelchair accordingly. Fortunately, modification of the brain activity caused by the imagination of the left or right hand movements is similar to the modification observed from a real left or right hand movements. The electrical activity of these modifications can be picked up from scalp electroencephalogram electrodes. In this work, we introduce a new method to detect and classify the imagination of the left and/or right hand movements. This method is based on exploring the time domain information in both alpha and beta rhythms using complex Morlet wavelet transform. Then, the fast Fourier transform is applied to explore the frequency domain information. The extracted features using both time and frequency domain information are then reduced using a feature subset selection algorithm. Then, the reduced features were fed into a multilayer backpropagation neural network to classify left from right hand movement imagination. The experimental results showed that the algorithm has reveals classification accuracy rates ranges from 97.77% to 100%, which are superior to the classification accuracy rates compared to other techniques.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"28 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130084905","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
N. Jamshidi, M. Rostami, S. Najarian, M. Menhaj, M. Saadatnia, A. Farzad
{"title":"Gait Modeling for Assessment of Ankle-Foot Orthosis","authors":"N. Jamshidi, M. Rostami, S. Najarian, M. Menhaj, M. Saadatnia, A. Farzad","doi":"10.1109/CIBEC.2008.4786090","DOIUrl":"https://doi.org/10.1109/CIBEC.2008.4786090","url":null,"abstract":"The aim of this paper was to present the optimum parameters of an ankle foot orthosis (AFO) using dashpot-spring modeling. Using kinematic and force data joints moment were determined through the calculations of inverse dynamics. In the proposed dynamic model selected muscles of shank and foot were replaced by spring-damper The generated torque in ankle could be modifided by changing the spring constant. Therefore it was possible to design a more comfortable AFO by modifying the parameters of the dashpot-spring of the model. Therefore, in this paper, the final goal was to help design AFOs which are more suitable to offset the deficiency of the lower limb muscles.","PeriodicalId":319971,"journal":{"name":"2008 Cairo International Biomedical Engineering Conference","volume":"18 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2008-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132040134","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}