Growing and Handling of Bacterial Cultures最新文献

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Carbapenemases "
Growing and Handling of Bacterial Cultures Pub Date : 2019-12-04 DOI: 10.5772/intechopen.76282
B. Bedenić, S. Sardelić
{"title":"Carbapenemases","authors":"B. Bedenić, S. Sardelić","doi":"10.5772/intechopen.76282","DOIUrl":"https://doi.org/10.5772/intechopen.76282","url":null,"abstract":"Carbapenems are usually regarded as the last treatment option for serious infections caused by Gram-negative and Gram-positive microorganisms. Although they are stable to hydrolysis by most β-lactamases, their usage as the last resort antbiotics was seriously compromised by the appearance of carbapenem-hydrolyzing enzymes called carbapenemases. These enzymes are produced mostly by Enterobacteriaceae and Gram-negative nonfermentative bacteria such as Pseudomonas aeruginosa and Acinetobacter bauman- nii . True carbapenemases belonging to Ambler molecular classes A, B, and D are often encoded by genes embedded in mobile genetic elements like plasmids, integrons, and transposons, which often harbor multiple resistance determinants limiting further the treatment options. At present, large number of nosocomial and community-acquired infections caused by worldwide spread of carbapenem-resistant Gram-negative bacte ria have become a major public health problem. Although polymyxins remain active, in vitro reports of benefits of combination schemes favor this strategy against carbapene -mase-producing Gram-negative bacilli.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"5 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132651330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
The War between Bacteria and Bacteriophages 细菌和噬菌体之间的战争
Growing and Handling of Bacterial Cultures Pub Date : 2019-10-31 DOI: 10.5772/intechopen.87247
B. Orzechowska, M. Mohammed
{"title":"The War between Bacteria and Bacteriophages","authors":"B. Orzechowska, M. Mohammed","doi":"10.5772/intechopen.87247","DOIUrl":"https://doi.org/10.5772/intechopen.87247","url":null,"abstract":"The rapid emergence and dissemination of multidrug-resistant (MDR) bacteria represents a worldwide crisis concerning that humankind is re-entering the ‘pre-antibiotics’ era. Before the discovery of antibiotics, bacteriophage therapy was widely enforced to combat bacterial infections. However, the discovery of penicillin in 1940 and other novel antibiotics replaced phage therapy, and they are being used as the first line of defence against pathogenic bacterial infections. Factors such as selective pressure resulted in bacteria becoming insensitive to one or multiple antibiotics, frequently leading to limited treatment options. This prompted a renewal of interest to the phage therapy that remains dubious due to its disadvantages such as host specificity and the development of bacterial resistance against phages. Evolution of bacterial genomes allowed bacteria to acquire vast mechanisms interfering with phage infection such as inhibition of phage adsorption, prevention of phage entry, superinfection exclusion, restriction-modification and abortive infection. Interestingly, phages have developed diverse counterstrategies to circumvent bacterial anti-phage mechanisms including digging for receptors, adapting to new receptors and masking and modifying restriction sites. Understanding the complex dynamics of bacteria-phage interaction is a preliminary step towards designing synthetic phages that can overcome limitations of phage therapy and potentially lead to defeating MDR bacteria.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124723904","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Design and Operation of Fixed-Bed Bioreactors for Immobilized Bacterial Culture 固定化细菌培养固定床生物反应器的设计与运行
Growing and Handling of Bacterial Cultures Pub Date : 2019-10-09 DOI: 10.5772/intechopen.87944
R. Pörtner, Rebecca Faschian
{"title":"Design and Operation of Fixed-Bed Bioreactors for Immobilized Bacterial Culture","authors":"R. Pörtner, Rebecca Faschian","doi":"10.5772/intechopen.87944","DOIUrl":"https://doi.org/10.5772/intechopen.87944","url":null,"abstract":"Fixed-bed processes operated in perfusion, where cells are immobilized within macroporous carriers, are a promising alternative to processes with suspended microbial or mammalian cells. Their potential has been demonstrated for many purposes. Nevertheless, the number of industrial fixed-bed processes is quite small. To some extent, this is due to the lack of process development tools for fixed-bed processes. To fill this gap, a strategy was developed for the design and evaluation of relevant process parameters of fixed-bed processes. A scale-up concept is presented in order to evaluate the performance as part of process design of fixed-bed processes. This comprises fixed-bed reactors on three different scales, the smallest being the downscaled Multiferm with 10 mL fixed-bed units, the second a 100 mL fixed-bed reactor, and the third a pilot-scale reactor with 1 L fixed-bed volume. The performance of this concept will be discussed for fixed-bed cultures of lactic acid bacteria. Furthermore, a reaction kinetic model for the design of fixed-bed reactors will be presented.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129523750","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Mycelium Differentiation and Development ofStreptomycesin Liquid Nonsporulating Cultures: Programmed Cell Death, Differentiation, and Lysis Condition Secondary Metabolite Production 链霉菌素液体非孢子培养菌丝的分化和发育:程序性细胞死亡、分化和裂解条件次生代谢物的产生
Growing and Handling of Bacterial Cultures Pub Date : 2019-05-03 DOI: 10.5772/INTECHOPEN.84182
Á. Manteca, B. Rioseras, Nathaly González-Quiñónez, Gemma Fernández-García, P. Yagüe
{"title":"Mycelium Differentiation and Development ofStreptomycesin Liquid Nonsporulating Cultures: Programmed Cell Death, Differentiation, and Lysis Condition Secondary Metabolite Production","authors":"Á. Manteca, B. Rioseras, Nathaly González-Quiñónez, Gemma Fernández-García, P. Yagüe","doi":"10.5772/INTECHOPEN.84182","DOIUrl":"https://doi.org/10.5772/INTECHOPEN.84182","url":null,"abstract":"Streptomycetes are mycelium-forming sporulating bacteria that produce two thirds of clinically relevant secondary metabolites. Secondary metabolite production is activated at specific developmental stages of Streptomyces life cycle. Despite this, Streptomyces differentiation in liquid nonsporulating cultures (flasks and industrial bioreactors) tends to be underestimated and the most important parameters managed are only indirectly related to differentiation: modifications to the culture media, optimization of productive strains by random or directed mutagenesis, analysis of biophysical parameters, etc. In this chapter, we review the relationship between differentiation and antibiotic production in liquid cultures. Morphological differentiation in liquid cultures is comparable to that occurring during pre-sporulation stages in solid cultures: an initial compartmentalized mycelium suffers a programmed cell death, and remaining viable segments then differentiate to a second multinucleated antibiotic-producing mycelium. Differentiation is one of the keys to interpreting biophysical fermentation parameters and to rationalizing the optimization of secondary metabolite production in liquid cultures.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"35 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129007203","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
What Is Limulus Amebocyte Lysate (LAL) and Its Applicability in Endotoxin Quantification of Pharma Products 什么是鲎试剂(LAL)及其在药品内毒素定量中的应用
Growing and Handling of Bacterial Cultures Pub Date : 2019-01-08 DOI: 10.5772/INTECHOPEN.81331
Y. Mehmood
{"title":"What Is Limulus Amebocyte Lysate (LAL) and Its Applicability in Endotoxin Quantification of Pharma Products","authors":"Y. Mehmood","doi":"10.5772/INTECHOPEN.81331","DOIUrl":"https://doi.org/10.5772/INTECHOPEN.81331","url":null,"abstract":"Limulus amebocyte lysate (LAL) is an aqueous extract of blood cells (amoebo-cytes) from the horseshoe crab, Limulus polyphemus . LAL reagent reacts with bacterial endotoxin and lipopolysaccharide (LPS), which is a membrane constituent of Gram-negative bacteria. This reaction is the base on the LAL reagent, which is then used for the finding and quantification of bacterial endotoxins. The Gel Clot LAL test provides very simple positive or negative result and is most often mentioned in international pharmacopeia monographs as the official test. Gel Clot assay is a qualitative LAL test for detection of Gram-negative bacteria endotoxins. The Gel Clot assay is run in tubes that are placed in a water bath or in dry heated oven at 37°C. After a one-hour incubation period, the tubes are flipped 180°. A firm clot that stays in the bottom of the tube indicates a positive reaction. If the liquid flows down the side of the tube, the result is negative for endotoxins.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"74 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130856025","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Growing and Handling of Bacterial Cultures within a Shared Core Facility for Integrated Structural Biology Program 综合结构生物学项目共享核心设施内细菌培养物的生长和处理
Growing and Handling of Bacterial Cultures Pub Date : 2018-11-08 DOI: 10.5772/INTECHOPEN.81932
L. Warner, O. Mass, N. D. Lenn, Briana R. Grantham, J. Oxford
{"title":"Growing and Handling of Bacterial Cultures within a Shared Core Facility for Integrated Structural Biology Program","authors":"L. Warner, O. Mass, N. D. Lenn, Briana R. Grantham, J. Oxford","doi":"10.5772/INTECHOPEN.81932","DOIUrl":"https://doi.org/10.5772/INTECHOPEN.81932","url":null,"abstract":"We have established and optimized standard operating procedures for growing and handling bacterial cultures in a shared core laboratory to support Integrative Structural Biology. The Integrative Structural Biology effort within the Biomolecular Research Center allows researchers to generate new knowledge about protein and RNA structure and function. We aim to understand how biomolecules assemble into stable structures and how structural dynamics impacts their function. Here we describe specific procedures for growing and handling bacterial cultures for overexpression and isolation of recombinant proteins, 15 N/ 13 C uniform labeling of recombinant proteins, protein isolation and purification, and analysis of protein solubility that are ideal for implementation in a shared research core laboratory that serves a multitude of diverse customers and research laboratories. pipettor speeds up the aliquoting process minimize the time that the competent cells are manipulated, their competency. competency of ca. 10 7 –10 8 CFU/ μ g of plasmid DNA.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"285 1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114259212","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
GeobacillusBacteria: Potential Commercial Applications in Industry, Bioremediation, and Bioenergy Production 地杆菌:在工业、生物修复和生物能源生产中的潜在商业应用
Growing and Handling of Bacterial Cultures Pub Date : 2018-11-05 DOI: 10.5772/INTECHOPEN.76053
G. Novik, V. Savich, Olga Meerovskaya
{"title":"GeobacillusBacteria: Potential Commercial Applications in Industry, Bioremediation, and Bioenergy Production","authors":"G. Novik, V. Savich, Olga Meerovskaya","doi":"10.5772/INTECHOPEN.76053","DOIUrl":"https://doi.org/10.5772/INTECHOPEN.76053","url":null,"abstract":"The genus Geobacillus is represented by obligately thermophilic bacteria able to grow in the temperature range of 35–75°C. They are modest bacteria isolated from various sources on routine media such as nutrient agar. Originally classified as representatives of Bacillus , the species of Geobacillus were established in 2001 as a new genus. However, sequence similarity between all species indicates that at least some species need to be reclassified at the genus level. In addition to 16S rRNA, housekeeping genes, 16S-23S rRNA gene internal transcribed spacer, and repetitive sequences can be used in classification and identification of thermophilic bacteria. The ability to survive and grow at high temperatures as well as utilization and synthesis of a wide range of compounds makes these bacteria and their products attractive for use in various spheres: food, paper, biotechnology industries, medicine, bioremediation, etc. A broad spectrum of applications arouses increased interest in the study of physiological and biochemical characteristics and triggers emergence of new usage areas for Geobacillus , such as bioenergy. The growing demand for energy leads to the development of alternative technologic options. Geobacillus species demonstrated the ability to generate or enhance productivity of important sources of bioenergy such as ethanol, isobutanol, 2,3-butanediol, biodiesel, and biogas.","PeriodicalId":282689,"journal":{"name":"Growing and Handling of Bacterial Cultures","volume":"142 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125766751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 13
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