2011 IEEE Seventh International Conference on e-Science Workshops最新文献_第3页

Modelling Distributed Multiscale Simulation Performance: An Application to Nanocomposites 分布式多尺度模拟性能建模:在纳米复合材料中的应用

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.37

D. Groen, James J. Suter, P. Coveney

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引用次数: 4

A Prototype System for Advance Reservations in a Biomedical Grid Computing Visualization Infrastructure 生物医学网格计算可视化基础设施中的提前预约原型系统

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.22

Benjamin Löhnhardt, Mathias Kaspar, R. Grutz, F. Viezens, F. Dickmann

引用次数: 1

Achieving Semantic Interoperability between Physiology Models and Clinical Data 实现生理模型和临床数据之间的语义互操作性

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.29

B. Bono, S. Sammut, P. Grenon

{"title":"Achieving Semantic Interoperability between Physiology Models and Clinical Data","authors":"B. Bono, S. Sammut, P. Grenon","doi":"10.1109/eScienceW.2011.29","DOIUrl":"https://doi.org/10.1109/eScienceW.2011.29","url":null,"abstract":"The practice and research of biomedicine generates considerable quantities of data and model resources (DMRs). The RICORDO effort works closely with modelling communities in the physiology and pharmacology domains to provide a semantic interoperability framework that addresses obstacles to biomedical DMR sharing. The RICORDO framework adopts a core set of community supported standard reference ontologies with which to effect, and reason over, modelling resource metadata. In some cases, knowledge in reference ontologies that is critical to particular interoperability objectives may be incomplete. The specific objective discussed in this paper focuses on the derivation of semantic interoperability between cardiovascular physiology models and related clinical data. In particular, the aim of this work is to semantically infer the anatomical relationship between variables in the Guyton circulatory model and data annotated with vascular disease terms from SNOMED-CT and the International Classification of Disease (ICD-10). The cardiovascular knowledgebase in the Foundational Model of Anatomy (FMA) was curated to provide a more extensive coverage of terms and relations referred to in Guyton model variables and related clinical data. A knowledge representation of cardiovascular connectivity was also developed with which to infer the topological features of the cardiovascular system exported from the curated knowledgebase. This approach allowed the calculation of semantic distance between physiology model variables and disease terms on the basis of their involvement with specific cardiovascular structures. The resulting methodology and associated extended knowledgebase allow the comparison of DMR metadata arising from annotations that conform to the RICORDO ontology standard. In particular, this approach quantifiably and semantically relates physiology and disease concepts annotating mathematical models and clinical data.","PeriodicalId":267737,"journal":{"name":"2011 IEEE Seventh International Conference on e-Science Workshops","volume":"47 2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2011-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129714876","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 3

Programming Abstraction for Resource Aware Stream Processing for Scientific Workflows 科学工作流中资源感知流处理的编程抽象

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.20

Chathura Herath, Beth Plale

引用次数: 0

Parallel Scale-Transfer in Multiscale MD-FE Coupling Using Remote Memory Access 基于远程存储器访问的多尺度MD-FE耦合中的并行尺度传输

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.8

Dorian Krause, R. Krause

引用次数: 2

A Principled Approach to Distributed Multiscale Computing, from Formalization to Execution 分布式多尺度计算的原则方法，从形式化到执行

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.9

J. Borgdorff, E. Lorenz, A. Hoekstra, J. Falcone, B. Chopard

引用次数: 28

Reputation-aware Filtering Services for Citizen Science Data 公民科学数据的声誉感知过滤服务

2011 IEEE Seventh International Conference on e-Science Workshops Pub Date : 2011-12-05 DOI: 10.1109/eScienceW.2011.25

C. Brooking, J. Hunter

引用次数: 1