María Jesús García-Godoy, Ismael Navas-Delgado, J. F. A. Montes
{"title":"SB-KOM: Integration of Pathway Information with BioPax","authors":"María Jesús García-Godoy, Ismael Navas-Delgado, J. F. A. Montes","doi":"10.1007/978-3-642-28062-7_6","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_6","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"46 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116192592","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Á. Sebastián, C. Cantalapiedra, B. Contreras-Moreira
{"title":"Interface Similarity Improves Comparison of DNA-Binding Proteins: The Homeobox Example","authors":"Á. Sebastián, C. Cantalapiedra, B. Contreras-Moreira","doi":"10.1007/978-3-642-28062-7_8","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_8","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"36 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125492952","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Noé Fernández-Pozo, Darío Guerrero-Fernández, R. Bautista, J. Gómez-Maldonado, C. Ávila, F. Cánovas, M. Claros
{"title":"GENote v.β: A Web Tool Prototype for Annotation of Unfinished Sequences in Non-model Eukaryotes","authors":"Noé Fernández-Pozo, Darío Guerrero-Fernández, R. Bautista, J. Gómez-Maldonado, C. Ávila, F. Cánovas, M. Claros","doi":"10.1007/978-3-642-28062-7_7","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_7","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"58 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116971657","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Pyicos: A Flexible Tool Library for Analyzing Protein-Nucleotide Interactions with Mapped Reads from Deep Sequencing","authors":"Juan González-Vallinas, S. Althammer, E. Eyras","doi":"10.1007/978-3-642-28062-7_9","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_9","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"42 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133773124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A. Muñoz-Mérida, Javier Ríos, H. Benzekri, O. Trelles
{"title":"Statistical Significance for NGS Reads Similarities","authors":"A. Muñoz-Mérida, Javier Ríos, H. Benzekri, O. Trelles","doi":"10.1007/978-3-642-28062-7_1","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_1","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"111 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131747265","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Fernando Muñiz-Fernandez, Angel Carreño-Torres, C. Morcillo-Suarez, A. Navarro
{"title":"Application of Array-Oriented Scientific Data Formats (NetCDF) to Genotype Data, GWASpi as an Example","authors":"Fernando Muñiz-Fernandez, Angel Carreño-Torres, C. Morcillo-Suarez, A. Navarro","doi":"10.1007/978-3-642-28062-7_2","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_2","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"30 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114385033","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Holistic Approach for Integrating Genomic Variation Information","authors":"Pedro Lopes, J. Oliveira","doi":"10.1007/978-3-642-28062-7_5","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_5","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"169 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132028885","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"iHOP Web Services Family","authors":"J. M. Fernández, R. Hoffmann, A. Valencia","doi":"10.1007/978-3-642-28062-7_12","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_12","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"47 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126894177","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Bioinformatic Software Developments in Spain","authors":"J. M. Fernández, A. Valencia","doi":"10.1007/978-3-642-28062-7_13","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_13","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132068904","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
João Almeida, João Tiple, M. Ramirez, J. Melo-Cristino, Cátia Vaz, Alexandre P. Francisco, João André Carriço
{"title":"An Ontology and a REST API for Sequence Based Microbial Typing Data","authors":"João Almeida, João Tiple, M. Ramirez, J. Melo-Cristino, Cátia Vaz, Alexandre P. Francisco, João André Carriço","doi":"10.1007/978-3-642-28062-7_3","DOIUrl":"https://doi.org/10.1007/978-3-642-28062-7_3","url":null,"abstract":"","PeriodicalId":266057,"journal":{"name":"Jornadas de BioInformática","volume":"44 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115953246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}