{"title":"Molecular network control through boolean canalization","authors":"D. Murrugarra, Elena S. Dimitrova","doi":"10.1186/s13637-015-0029-2","DOIUrl":"https://doi.org/10.1186/s13637-015-0029-2","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"21 3","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114028985","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"MOBAS: identification of disease-associated protein subnetworks using modularity-based scoring","authors":"M. Ayati, Sinan Erten, M. Chance, Mehmet Koyutürk","doi":"10.1186/s13637-015-0025-6","DOIUrl":"https://doi.org/10.1186/s13637-015-0025-6","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"42 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-06-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126738150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Exploring soybean metabolic pathways based on probabilistic graphical model and knowledge-based methods","authors":"Jie Hou, G. Stacey, Jianlin Cheng","doi":"10.1186/s13637-015-0026-5","DOIUrl":"https://doi.org/10.1186/s13637-015-0026-5","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"9 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116920643","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
P. Guzzi, M. T. Martino, P. Tagliaferri, P. Tassone, M. Cannataro
{"title":"Analysis of miRNA, mRNA, and TF interactions through network-based methods","authors":"P. Guzzi, M. T. Martino, P. Tagliaferri, P. Tassone, M. Cannataro","doi":"10.1186/s13637-015-0023-8","DOIUrl":"https://doi.org/10.1186/s13637-015-0023-8","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"53 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128229843","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
F. Faisal, L. Meng, Joseph Crawford, T. Milenković
{"title":"The post-genomic era of biological network alignment","authors":"F. Faisal, L. Meng, Joseph Crawford, T. Milenković","doi":"10.1186/s13637-015-0022-9","DOIUrl":"https://doi.org/10.1186/s13637-015-0022-9","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130496322","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Carcinogenesis: alterations in reciprocal interactions of normal functional structure of biologic systems","authors":"G. Davydyan","doi":"10.1186/s13637-015-0030-9","DOIUrl":"https://doi.org/10.1186/s13637-015-0030-9","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"353 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2015-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130948084","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Modeling and systematic analysis of biomarker validation using selected reaction monitoring","authors":"E. Atashpaz-Gargari, U. Braga-Neto, E. Dougherty","doi":"10.1186/s13637-014-0017-y","DOIUrl":"https://doi.org/10.1186/s13637-014-0017-y","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"26 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2014-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133611313","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Simultaneous identification of robust synergistic subnetwork markers for effective cancer prognosis","authors":"Navadon Khunlertgit, Byung-Jun Yoon","doi":"10.1186/s13637-014-0019-9","DOIUrl":"https://doi.org/10.1186/s13637-014-0019-9","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"353 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2014-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115924574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M. Nakayama, W. Nowak, H. Ishikawa, K. Asakawa, Y. Ichibe
{"title":"Discovering irregular pupil light responses to chromatic stimuli using waveform shapes of pupillograms","authors":"M. Nakayama, W. Nowak, H. Ishikawa, K. Asakawa, Y. Ichibe","doi":"10.1186/s13637-014-0018-x","DOIUrl":"https://doi.org/10.1186/s13637-014-0018-x","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"203 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2014-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126638210","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Unbiased bootstrap error estimation for linear discriminant analysis","authors":"T. Vu, Chao Sima, U. Braga-Neto, E. Dougherty","doi":"10.1186/s13637-014-0015-0","DOIUrl":"https://doi.org/10.1186/s13637-014-0015-0","url":null,"abstract":"","PeriodicalId":227594,"journal":{"name":"EURASIP Journal on Bioinformatics and Systems Biology","volume":"38 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2014-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121681743","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}