{"title":"Molecular dynamics simulations: Principles, methods, and applications in protein conformational dynamics","authors":"A. Padhi, Matej Janezic, Kam Y. J. Zhang","doi":"10.1016/b978-0-323-90264-9.00026-x","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00026-x","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130829326","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Developments, advancements, and contributions of mass spectrometry in omics technologies","authors":"S. Kumar","doi":"10.1016/b978-0-323-90264-9.00021-0","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00021-0","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"23 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125429626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
S. Sasidharan, Niharika Nag, Timir Tripathi, Prakash Saudagar
{"title":"Experimental methods to study the thermodynamics of protein–protein interactions","authors":"S. Sasidharan, Niharika Nag, Timir Tripathi, Prakash Saudagar","doi":"10.1016/b978-0-323-90264-9.00007-6","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00007-6","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"80 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122146391","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Envisaging the conformational space of proteins by coupling machine learning and molecular dynamics","authors":"Murali Aarthy, S. Singh","doi":"10.1016/b978-0-323-90264-9.00028-3","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00028-3","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"92 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115104307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Vinita Sharma, Satyendra Singh, Tadi Sai Ratnakar, V. Prajapati
{"title":"Immunoinformatics and reverse vaccinology methods to design peptide-based vaccines","authors":"Vinita Sharma, Satyendra Singh, Tadi Sai Ratnakar, V. Prajapati","doi":"10.1016/b978-0-323-90264-9.00029-5","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00029-5","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"9 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130483179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
O. Olubiyi, Suman Samantray, Alexander-Maurice Illig
{"title":"Advances in structure-based virtual screening for drug discovery","authors":"O. Olubiyi, Suman Samantray, Alexander-Maurice Illig","doi":"10.1016/b978-0-323-90264-9.00024-6","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00024-6","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"185 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131885801","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maria Georgina Herrera, M. Giampà, N. Tonali, V. Dodero
{"title":"Multimodal methods to study protein aggregation and fibrillation","authors":"Maria Georgina Herrera, M. Giampà, N. Tonali, V. Dodero","doi":"10.1016/b978-0-323-90264-9.00006-4","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00006-4","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124767509","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Akshita Gupta, Anamika Singh, N. Ahmad, T. Singh, Sujata Sharma, P. Sharma
{"title":"Experimental techniques to study protein dynamics and conformations","authors":"Akshita Gupta, Anamika Singh, N. Ahmad, T. Singh, Sujata Sharma, P. Sharma","doi":"10.1016/b978-0-323-90264-9.00012-x","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00012-x","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116608859","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Advances in heterologous protein expression strategies in yeast and insect systems","authors":"Meenakshi Singh, Smita Gupta, A. Rawat, S. Singh","doi":"10.1016/b978-0-323-90264-9.00002-7","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00002-7","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"5 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125394063","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Molecular simulations to study IDP-IDP interactions and their complexes","authors":"K. Kasahara","doi":"10.1016/b978-0-323-90264-9.00034-9","DOIUrl":"https://doi.org/10.1016/b978-0-323-90264-9.00034-9","url":null,"abstract":"","PeriodicalId":212765,"journal":{"name":"Advances in Protein Molecular and Structural Biology Methods","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115203562","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}