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cmIF: A Python Library for Scalable Multiplex Imaging Pipelines cmIF:用于可扩展多路成像管道的Python库
International Symposium on Mathematical and Computational Oncology Pub Date : 2019-10-14 DOI: 10.1007/978-3-030-35210-3_3
Jennifer Eng, Elmar Bucher, Elliot Gray, L. Campbell, Guillaume Thibault, Laura M. Heiser, Summer L. Gibbs, J. Gray, K. Chin, Y. Chang
{"title":"cmIF: A Python Library for Scalable Multiplex Imaging Pipelines","authors":"Jennifer Eng, Elmar Bucher, Elliot Gray, L. Campbell, Guillaume Thibault, Laura M. Heiser, Summer L. Gibbs, J. Gray, K. Chin, Y. Chang","doi":"10.1007/978-3-030-35210-3_3","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_3","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"120 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115086831","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Population Modeling of Tumor Growth Curves, the Reduced Gompertz Model and Prediction of the Age of a Tumor 肿瘤生长曲线的群体建模，简化Gompertz模型和肿瘤年龄的预测
International Symposium on Mathematical and Computational Oncology Pub Date : 2019-10-14 DOI: 10.1007/978-3-030-35210-3_7
C. Vaghi, A. Rodallec, R. Fanciullino, J. Ciccolini, J. Mochel, M. Mastri, J. Ebos, C. Poignard, S. Benzekry
{"title":"Population Modeling of Tumor Growth Curves, the Reduced Gompertz Model and Prediction of the Age of a Tumor","authors":"C. Vaghi, A. Rodallec, R. Fanciullino, J. Ciccolini, J. Mochel, M. Mastri, J. Ebos, C. Poignard, S. Benzekry","doi":"10.1007/978-3-030-35210-3_7","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_7","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"1575 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125132057","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Flexible Data Trimming for Different Machine Learning Methods in Omics-Based Personalized Oncology 基于组学的个性化肿瘤学中不同机器学习方法的灵活数据修剪
International Symposium on Mathematical and Computational Oncology Pub Date : 2019-10-14 DOI: 10.1007/978-3-030-35210-3_5
Victor Tkachev, A. Buzdin, Nicolas Borisov
{"title":"Flexible Data Trimming for Different Machine Learning Methods in Omics-Based Personalized Oncology","authors":"Victor Tkachev, A. Buzdin, Nicolas Borisov","doi":"10.1007/978-3-030-35210-3_5","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_5","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"32 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129213349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modeling the Evolution of Ploidy in a Resource Restricted Environment 资源受限环境下倍性进化的建模
International Symposium on Mathematical and Computational Oncology Pub Date : 2019-10-14 DOI: 10.1007/978-3-030-35210-3_2
G. Kimmel, J. Barnholtz-Sloan, Hanlee P. Ji, P. Altrock, N. Andor
{"title":"Modeling the Evolution of Ploidy in a Resource Restricted Environment","authors":"G. Kimmel, J. Barnholtz-Sloan, Hanlee P. Ji, P. Altrock, N. Andor","doi":"10.1007/978-3-030-35210-3_2","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_2","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128924762","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Towards Model-Based Characterization of Biomechanical Tumor Growth Phenotypes 基于模型的生物力学肿瘤生长表型表征
International Symposium on Mathematical and Computational Oncology Pub Date : 2019-10-14 DOI: 10.1007/978-3-030-35210-3_6
D. Abler, P. Büchler, R. Rockne
{"title":"Towards Model-Based Characterization of Biomechanical Tumor Growth Phenotypes","authors":"D. Abler, P. Büchler, R. Rockne","doi":"10.1007/978-3-030-35210-3_6","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_6","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"34 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132159221","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Phylogenies Derived from Matched Transcriptome Reveal the Evolution of Cell Populations and Temporal Order of Perturbed Pathways in Breast Cancer Brain Metastases 来自匹配转录组的系统发育揭示了乳腺癌脑转移细胞群体的进化和扰动通路的时间顺序
International Symposium on Mathematical and Computational Oncology Pub Date : 2019-10-14 DOI: 10.1007/978-3-030-35210-3_1
Yifeng Tao, Haoyun Lei, Adrian V. Lee, Jian Ma, R. Schwartz
{"title":"Phylogenies Derived from Matched Transcriptome Reveal the Evolution of Cell Populations and Temporal Order of Perturbed Pathways in Breast Cancer Brain Metastases","authors":"Yifeng Tao, Haoyun Lei, Adrian V. Lee, Jian Ma, R. Schwartz","doi":"10.1007/978-3-030-35210-3_1","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_1","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"75 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125958252","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Detecting Subclones from Spatially Resolved RNA-Seq Data 从空间分辨RNA-Seq数据检测亚克隆
International Symposium on Mathematical and Computational Oncology Pub Date : 1900-01-01 DOI: 10.1007/978-3-030-64511-3_10
Phillip B. Nicol
{"title":"Detecting Subclones from Spatially Resolved RNA-Seq Data","authors":"Phillip B. Nicol","doi":"10.1007/978-3-030-64511-3_10","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_10","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"59 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129213409","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plasticity in Cancer Cell Populations: Biology, Mathematics and Philosophy of Cancer 癌症细胞群的可塑性:癌症的生物学、数学和哲学
International Symposium on Mathematical and Computational Oncology Pub Date : 1900-01-01 DOI: 10.1007/978-3-030-64511-3_1
J. Clairambault
{"title":"Plasticity in Cancer Cell Populations: Biology, Mathematics and Philosophy of Cancer","authors":"J. Clairambault","doi":"10.1007/978-3-030-64511-3_1","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_1","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"24 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134032604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
CHIMERA: Combining Mechanistic Models and Machine Learning for Personalized Chemotherapy and Surgery Sequencing in Breast Cancer CHIMERA:将机制模型和机器学习相结合用于乳腺癌的个性化化疗和手术测序
International Symposium on Mathematical and Computational Oncology Pub Date : 1900-01-01 DOI: 10.1007/978-3-030-64511-3_2
Cristian Axenie, Daria Kurz
{"title":"CHIMERA: Combining Mechanistic Models and Machine Learning for Personalized Chemotherapy and Surgery Sequencing in Breast Cancer","authors":"Cristian Axenie, Daria Kurz","doi":"10.1007/978-3-030-64511-3_2","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_2","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"27 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115638378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Novel Driver Synonymous Mutations in the Coding Regions of GCB Lymphoma Patients Improve the Transcription Levels of BCL2 GCB淋巴瘤患者编码区的新型驱动同义突变可提高BCL2的转录水平
International Symposium on Mathematical and Computational Oncology Pub Date : 1900-01-01 DOI: 10.1007/978-3-030-64511-3_11
Ofek Shami-Schnitzer, Zohar Zafrir, T. Tuller
{"title":"Novel Driver Synonymous Mutations in the Coding Regions of GCB Lymphoma Patients Improve the Transcription Levels of BCL2","authors":"Ofek Shami-Schnitzer, Zohar Zafrir, T. Tuller","doi":"10.1007/978-3-030-64511-3_11","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_11","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116819782","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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