{"title":"Fast Estimation of Downsampling Factor for Biomedical Image Registration","authors":"A. Krylov, F. Guryanov, N. Mamaev, D. Yurin","doi":"10.1145/3288200.3288203","DOIUrl":"https://doi.org/10.1145/3288200.3288203","url":null,"abstract":"An approach to fasten medical image registration algorithms is suggested. It is based on the preliminary estimation the possible downsampling factor before the registration. The estimation algorithm uses fast bidirectional empirical mode decomposition. An analysis and approvement of the method is performed by multiscale ridge analysis using retinal image database DRIVE, astrocyte images and images from Computed Tomography Emphysema Database. Proposed registration acceleration algorithm was tested for rigid registration methods with HeLa cells video data set.","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"40 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123974324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
F. Attivissimo, A. Nisio, A. Lanzolla, S. Selicato, P. Larizza
{"title":"Development of an Electromagnetic Tracking System for Surgical Instruments Positioning","authors":"F. Attivissimo, A. Nisio, A. Lanzolla, S. Selicato, P. Larizza","doi":"10.1145/3288200.3288216","DOIUrl":"https://doi.org/10.1145/3288200.3288216","url":null,"abstract":"Electromagnetic tracking systems are widely used in image-guided surgery to detect the position of surgical instrument in the patient's anatomical 3D model. The present study proposes the development and evaluation of a new EMTS able to provide a wide tracking volume. The innovation of this EMTS mainly consists in the design of a suitable Field Generator (FG), including five coils properly arranged in order to increase the magnetic field and, as a consequence, the sensor sensitivity in the working volume. Different methods to convert sensor voltage values in the Cartesian coordinates were investigated and compared in term of position accuracy. The results of experimental tests show good performances of the developed system that allows to increase the distance between sensor and FG with respect to currently EMTS on markets, ensuring a high accuracy of the measurement.","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"68 4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124443981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Automatic Segmentation of HEp-2 Cells Based on Active Contours Model","authors":"Donato Cascio, V. Taormina, G. Raso","doi":"10.1145/3288200.3288204","DOIUrl":"https://doi.org/10.1145/3288200.3288204","url":null,"abstract":"In the past years, a great deal of effort was put into research regarding Indirect Immunofluorescence techniques with the aim of development of CAD systems. In this work a method for segmenting HEp-2 cells in IIF images is presented. Such task is one of the most challenging of automated IIF analysis, because the segmentation algorithm has to cope with a large heterogeneity of shapes and textures. In order to address this problem, numerous techniques and their combinations were evaluated, in a process aimed at maximizing the figure of merit. The proposed method, for a greater definition of cellular contours, uses the active contours in the last phase of the process. The initial conditions, center position and initial curve of the active contour, were obtained using a randomized Hough transform for ellipse; the idea in identifying cells was to approximate them initially to ellipses. The purpose of the active contours, within the segmentation process, is to allow the separation of connected regions (such as two overlapping cells), in order to obtain a better definition of the objects to be analyzed (the cells). Our system has been developed and tested on public database. Segmentation performances were evaluated in terms of Dice index and the method was compared with other state-of-the-art workers. The results obtained demonstrate the goodness of the method in the characterization of HEp-2 cells. The developed method shows great strength and convergence speed. Furthermore, the flexibility of the proposed method allows it to be easily used in other biomedical contexts.","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"60 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128602075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","authors":"","doi":"10.1145/3288200","DOIUrl":"https://doi.org/10.1145/3288200","url":null,"abstract":"","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"24 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133805771","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jamie Scanlan, Francis F. Li, O. Umnova, G. Rakoczy, Nóra Lövey
{"title":"Machine Learning and DSP Algorithms for Screening of Possible Osteoporosis Using Electronic Stethoscopes","authors":"Jamie Scanlan, Francis F. Li, O. Umnova, G. Rakoczy, Nóra Lövey","doi":"10.1145/3288200.3288215","DOIUrl":"https://doi.org/10.1145/3288200.3288215","url":null,"abstract":"Osteoporosis is a prevalent but asymptomatic condition that affects a large population of the elderly, resulting in a high risk of fracture. Several methods have been developed and are available in general hospitals to indirectly assess the bone quality in terms of mineral material level and porosity. In this paper we describe a new method that uses a medical reflex hammer to exert testing stimuli, an electronic stethoscope to acquire impulse responses from tibia, and intelligent signal processing based on artificial neural network machine learning to determine the likelihood of osteoporosis. The proposed method makes decisions from the key components found in the time-frequency domain of impulse responses. Using two common pieces of clinical apparatus, this method might be suitable for the large population screening tests for the early diagnosis of osteoporosis, thus avoiding secondary complications. Following some discussions of the mechanism and procedure, this paper details the techniques of impulse response acquisition using a stethoscope and the subsequent signal processing and statistical machine learning algorithms for decision making. Pilot testing results achieved over 80% in detection sensitivity.","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115715495","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
S. S. Gilakjani, M. Bouchard, R. Goubran, F. Knoefel
{"title":"Long-Term Sleep Assessment by Unobtrusive Pressure Sensor Arrays","authors":"S. S. Gilakjani, M. Bouchard, R. Goubran, F. Knoefel","doi":"10.1145/3288200.3288214","DOIUrl":"https://doi.org/10.1145/3288200.3288214","url":null,"abstract":"Due to a globally aging population, there is a growing demand for smart home technology which can serve to monitor the health and safety of older adults. Sleep monitoring has emerged as a crucial element of this monitoring. While polysomnography (PSG) is an effective and accurate tool for sleep monitoring, it is obtrusive as the user must wear the instruments during the experiment. Therefore, there has been a growing interest in deploying unobtrusive sleep monitoring devices, specifically for long-term patient monitoring. This paper performs a comprehensive investigation on long-term sleep pattern changes by investigating bed occupancy, number of bed exits during day and breathing rate variability. Measurements were made using unobtrusive pressure sensitive sensor arrays on data captured from several participants collected in a long-term basis, which provided a large volume of data. Multiple algorithms are proposed that can be described as movement detection, sensor data fusion and bed occupancy detection. The methods developed in the paper and the related findings can be of interest for future clinical remote patient monitoring systems.","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"119 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116037690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Luis Lopez Diaz, Andersson Contreras Olmos, A. Cadena, W. Percybrooks, Juan Pablo Tello P.
{"title":"Three-Dimensional Reconstruction of Cardiac Structures Using CT Images","authors":"Luis Lopez Diaz, Andersson Contreras Olmos, A. Cadena, W. Percybrooks, Juan Pablo Tello P.","doi":"10.1145/3288200.3288210","DOIUrl":"https://doi.org/10.1145/3288200.3288210","url":null,"abstract":"This paper describes a software tool for building and displaying tri-dimensional cardiac structures from a sequence of Computer Tomography (CT) scan images. The development process followed for this work can be divided into 5 stages. During the first stage, suitable DICOM images are selected from a CT scan machine. In the second stage, the images are pre-processed in order to reduce noise levels and enhance relevant features. The third stage compares the performance of three image segmentation methods on the pre-processed images: Region growing, Otsu's algorithm and active contours. It was found that active contours achieves the best isolation of the Region of Interest (ROI), while the other two methods recognized morphological structures outside of the ROI. In the four stage, a 3D image of the ROI is renderized. Finally, the reconstructed 3D model is visualized in stage five using a custombuilt Graphical User Interface (GUI). The resulting 3D models are validated by visual inspection by three heart and imaging experts, which determine if the model is suitable for use in diagnosis or surgery planning.","PeriodicalId":152443,"journal":{"name":"Proceedings of the 2018 3rd International Conference on Biomedical Imaging, Signal Processing","volume":"69 1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123247991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}