Conservation Genetics Resources最新文献

{"title":"Increased sample size provides novel insights into population structure of Mediterranean loggerhead sea turtles","authors":"A. Kaska, Gizem Koc, D. Sözbilen, Diryaq Salih, Ashraf Glidan, Abd Alati Elsowayeb, Almokhtar Saied, D. Margaritoulis, Panagiota Theodorou, A. Rees, R. Snape, A. Broderick, B. Godley, Damla Beton, Meryem Ozkan, I. Jribi, M. Ismail, A. Hmida, Ali H. Badreddine, E. Saçdanaku, V. Rae, M. S. Abdelwarith, N. Naguib, Lobna Ben Nakhla, A. Limam, Marwan Abderrahim, Julien Sémelin, Y. Kaska","doi":"10.1007/s12686-023-01303-9","DOIUrl":"https://doi.org/10.1007/s12686-023-01303-9","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"15 1","pages":"67-75"},"PeriodicalIF":1.1,"publicationDate":"2023-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43730530","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"A validated targeted assay for environmental DNA detections of the Atlantic wolffish (Anarhichas lupus)","authors":"Marion Chevrinais, G. Parent","doi":"10.1007/s12686-023-01302-w","DOIUrl":"https://doi.org/10.1007/s12686-023-01302-w","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"1 1","pages":"1-8"},"PeriodicalIF":1.1,"publicationDate":"2023-05-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42682930","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Isolation and characterization of 46 SNP markers in Gymnocypris chilianensis","authors":"Ya Liu, Wenqiong Wu, Siyi Zhu, Yeyu Chen, Xiaoyun Wu, Jiansheng Lai, Mingjiang Song, Feiyang Li, Qiang Li","doi":"10.1007/s12686-023-01304-8","DOIUrl":"https://doi.org/10.1007/s12686-023-01304-8","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"15 1","pages":"77-81"},"PeriodicalIF":1.1,"publicationDate":"2023-05-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47837334","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Development of a microhaplotype panel to inform management of gray wolves","authors":"T. Delomas, Jennifer Struthers, Tricia Hebdon, M. Campbell","doi":"10.1007/s12686-023-01301-x","DOIUrl":"https://doi.org/10.1007/s12686-023-01301-x","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"1 1","pages":"1-9"},"PeriodicalIF":1.1,"publicationDate":"2023-04-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48276954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Cost-effective library preparation for whole genome sequencing with feather DNA","authors":"Teia M. Schweizer, M. DeSaix","doi":"10.1007/s12686-023-01299-2","DOIUrl":"https://doi.org/10.1007/s12686-023-01299-2","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":" ","pages":"1-8"},"PeriodicalIF":1.1,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46803150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Shallow sequencing can mislead when evaluating hybridization capture methods","authors":"L. White","doi":"10.1007/s12686-023-01298-3","DOIUrl":"https://doi.org/10.1007/s12686-023-01298-3","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"1 1","pages":"1-6"},"PeriodicalIF":1.1,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44922274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Development and characterization of 165 SNP markers in Mimosa bimucronata (Candolle) O. Kuntze","authors":"Qian Wang, Chunjing Wang, J. Wan","doi":"10.1007/s12686-023-01297-4","DOIUrl":"https://doi.org/10.1007/s12686-023-01297-4","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":" ","pages":"1-8"},"PeriodicalIF":1.1,"publicationDate":"2023-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47184586","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Mitochondrial genome of <i>Acheilognathusbarbatulus</i> (Cypriniformes, Cyprinidae, Acheilognathinae): characterisation and phylogenetic analysis.","authors":"Jinhui Yu, Xin Chen, Ruyao Liu, Yongtao Tang, Guoxing Nie, Chuanjiang Zhou","doi":"10.3897/BDJ.11.e93947","DOIUrl":"10.3897/BDJ.11.e93947","url":null,"abstract":"<p><p><i>Acheilognathusbarbatulus</i> is distributed in Yangtze River, Yellow River and Pearl River systems in China. Genome data can help to understand the phylogenetic relationships of <i>A.barbatulus</i>, but its complete mitochondrial genome has not been published. We determined the complete mitochondrial genome structure and characteristics of this species and constructed a comprehensive phylogenetic tree, based on mitochondrial genome data of several species of <i>Acheilognathus</i>, <i>Rhodeus</i> and <i>Pseudorasboraparva</i>. The complete length of the mitochondrial genome of <i>A.barbatulus</i> is 16726 bp. The genome is a covalently closed double-stranded circular molecule containing 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNAs, a D-loop and a light strand replication initiation region. The base composition of the complete mitochondrial genome is A (29.33%) > T (27.6%) > C (26.12%) > G (16.95%), showing a strong AT preference and anti-G bias. All 13 PCGs have different degrees of codon preference, except for cytochrome c oxidase 1, which uses GTG as the start codon. All the PCGs use ATG as the start codon and the stop codon is dominated by TAG. The encoded amino acids Leu and Ser exist in two types, whereas the rest are all present as one type, except for tRNA^{Ser (GCT)}, which lacks the D-arm and has an incomplete secondary structure, all other tRNAs can be folded to form a typical cloverleaf secondary structure. Based on the 13 PCG tandems, the Maximum Likelihood and Bayesian trees were constructed, based on the concatenated sequence of 13 PCGs for the genera <i>Acheilognathus</i> and <i>Rhodeus</i>, with <i>Pseudorasboraparva</i> as the outgroup. <i>Acheilognathusbarbatulus</i>, <i>Acheilognathustonkinensis</i> and Acheilognathuscf.macropterus were clustered together and the most closely related. The results of this study enrich the mitochondrial genomic data of <i>Acheilognathus</i> and provide molecular and genetic base information for species conservation, molecular identification and species evolution of Acheilognathinae.</p>","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"6 1","pages":"e93947"},"PeriodicalIF":1.3,"publicationDate":"2023-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10848848/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74403623","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Development and characterization of 148 SNP markers in the caribbean symmetrical brain coral Pseudodiploria strigosa","authors":"A. Vollmer, M. Tringali, M. Allen","doi":"10.1007/s12686-022-01294-z","DOIUrl":"https://doi.org/10.1007/s12686-022-01294-z","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"14 1","pages":"381 - 386"},"PeriodicalIF":1.1,"publicationDate":"2022-11-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43045802","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Identification of cetaceans from bones using molecular techniques provides insights into cetacean species diversity and composition in coastal western Taiwan Strait waters, China","authors":"Yufei Dai, Liyuan Zhao, Fuxing Wu, X. Miao, Qianhui Zeng, Xianyan Wang","doi":"10.1007/s12686-022-01296-x","DOIUrl":"https://doi.org/10.1007/s12686-022-01296-x","url":null,"abstract":"","PeriodicalId":10625,"journal":{"name":"Conservation Genetics Resources","volume":"15 1","pages":"1 - 5"},"PeriodicalIF":1.1,"publicationDate":"2022-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47308764","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}