Isabel Cristina Pérez-Verona, M. Tribastone, Max Tschaikowski
{"title":"Fixed-Point Computation of Equilibria in Biochemical Regulatory Networks","authors":"Isabel Cristina Pérez-Verona, M. Tribastone, Max Tschaikowski","doi":"10.1007/978-3-030-28042-0_4","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_4","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"71 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124622435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Reachability Analysis and Hybrid Systems Biology - In Memoriam Oded Maler","authors":"T. Dang","doi":"10.1007/978-3-030-28042-0_2","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_2","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"69 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114719779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Extracting Landscape Features from Single Particle Trajectories","authors":"Á. Halász, Brandon L. Clark, O. Maler, J. Edwards","doi":"10.1007/978-3-030-28042-0_7","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_7","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"11 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115916668","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Matej Hajnal, Morgane Nouvian, David Šafránek, Tatjana Petrov
{"title":"Data-Informed Parameter Synthesis for Population Markov Chains","authors":"Matej Hajnal, Morgane Nouvian, David Šafránek, Tatjana Petrov","doi":"10.1007/978-3-030-28042-0_10","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_10","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"55 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125075630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Hybrid Modeling of Metabolic-Regulatory Networks (Extended Abstract)","authors":"Lin Liu, A. Bockmayr","doi":"10.1007/978-3-030-28042-0_12","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_12","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"28 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116760868","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alberto Averna, M. Carè, S. Buccelli, M. Semprini, F. Difato, M. Chiappalone
{"title":"A Multimodular System to Study the Impact of a Focal Lesion in Neuronal Cell Cultures","authors":"Alberto Averna, M. Carè, S. Buccelli, M. Semprini, F. Difato, M. Chiappalone","doi":"10.1007/978-3-030-28042-0_1","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_1","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"32 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122805167","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Daniel Figueiredo, Eugénio Rocha, M. Martins, M. Chaves
{"title":"rPrism - A Software for Reactive Weighted State Transition Models","authors":"Daniel Figueiredo, Eugénio Rocha, M. Martins, M. Chaves","doi":"10.1007/978-3-030-28042-0_11","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_11","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"9 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128200845","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Reaction Networks, Oscillatory Motifs and Parameter Estimation in Biochemical Systems","authors":"I. Schreiber, F. Muzika, J. Červený","doi":"10.1007/978-3-030-28042-0_3","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_3","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"41 2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"127383374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Using a Hybrid Approach to Model Central Carbon Metabolism Across the Cell Cycle","authors":"Cecile Moulin, L. Tournier, S. Pérès","doi":"10.1007/978-3-030-28042-0_9","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_9","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"14 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131857484","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
C. Kyriakopoulos, Pascal Giehr, Alexander Lück, J. Walter, V. Wolf
{"title":"A Hybrid HMM Approach for the Dynamics of DNA Methylation","authors":"C. Kyriakopoulos, Pascal Giehr, Alexander Lück, J. Walter, V. Wolf","doi":"10.1007/978-3-030-28042-0_8","DOIUrl":"https://doi.org/10.1007/978-3-030-28042-0_8","url":null,"abstract":"","PeriodicalId":102233,"journal":{"name":"International Workshop on Hybrid Systems Biology","volume":"34 3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-01-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123353735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}