Saniya Kozhakhmetova, Pavel Tarlykov, Dina Bayanbek, Elena Zholdybayeva
{"title":"Current perspectives on multi-omics studies of bacteria from the Bacteroides group","authors":"Saniya Kozhakhmetova, Pavel Tarlykov, Dina Bayanbek, Elena Zholdybayeva","doi":"10.70264/jbr.v1.3.2025.1","DOIUrl":"https://doi.org/10.70264/jbr.v1.3.2025.1","url":null,"abstract":"This review discusses multi-omics (genomic, transcriptomic, and proteomic) approaches for studying bacteria of the Bacteroides spp. group, which are the most common anaerobes in the human colon and are responsible for over half of all intra-abdominal anaerobic infections. These multi-omics approaches have enabled the identification of virulence factors, antimicrobial resistance genes, and other functional elements of the Bacteroides genome. This information is crucial for understanding the pathogenic potential of these bacteria and their role in the development of anaerobic infections. This review examines the transcriptional response of Bacteroides after exposure to sub-inhibitory concentrations of antimicrobial drugs, as well as the main methods of proteomic analysis and achievements in studying the Bacteroides proteome. Overall, the modern perspectives of multi-omics studies on Bacteroides emphasize the possibility of integrating different omics approaches for a more comprehensive understanding of their biology, functional characteristics, and ecological roles in the gut ecosystem.","PeriodicalId":50251,"journal":{"name":"Journal of Biological Research-Thessaloniki","volume":"1 3","pages":"1-13"},"PeriodicalIF":0.0,"publicationDate":"2025-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bioresearch.kz/index.php/journal/article/download/54/40","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147908808","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"From the call to prayer to the silences of the museum","authors":"Eleni Kallimopoulou, Kostis Kornetis, P. Poulos","doi":"10.4324/9780429201561-17","DOIUrl":"https://doi.org/10.4324/9780429201561-17","url":null,"abstract":"","PeriodicalId":50251,"journal":{"name":"Journal of Biological Research-Thessaloniki","volume":"63 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2020-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84202790","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Traits of seasonal dimorphism associated with adaptation to cold stress in Origanum dictamnus L. (Lamiaceae)","authors":"V. Lianopoulou, A. Bosabalidis","doi":"10.1186/2241-5793-21-17","DOIUrl":"https://doi.org/10.1186/2241-5793-21-17","url":null,"abstract":"","PeriodicalId":50251,"journal":{"name":"Journal of Biological Research-Thessaloniki","volume":"43 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2014-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79006248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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