生物学最新文献

{"title":"Postsynaptic BMP signaling regulates myonuclear properties in Drosophila larval muscles.","authors":"Victoria E von Saucken, Stefanie E Windner, Giovanna Armetta, Mary K Baylies","doi":"10.1083/jcb.202404052","DOIUrl":"10.1083/jcb.202404052","url":null,"abstract":"<p><p>The syncytial mammalian muscle fiber contains a heterogeneous population of (myo)nuclei. At the neuromuscular junction (NMJ), myonuclei have specialized positioning and gene expression. However, it remains unclear how myonuclei are recruited and what regulates myonuclear output at the NMJ. Here, we identify specific properties of myonuclei located near the Drosophila larval NMJ. These synaptic myonuclei have increased size in relation to their surrounding cytoplasmic domain (size scaling), increased DNA content (ploidy), and increased levels of transcription factor pMad, a readout for BMP signaling activity. Our genetic manipulations show that local BMP signaling affects muscle size, nuclear size, ploidy, and NMJ size and function. In support, RNA sequencing analysis reveals that pMad regulates genes involved in muscle growth, ploidy (i.e., E2f1), and neurotransmission. Our data suggest that muscle BMP signaling instructs synaptic myonuclear output that positively shapes the NMJ synapse. This study deepens our understanding of how myonuclear heterogeneity supports local signaling demands to fine tune cellular function and NMJ activity.</p>","PeriodicalId":7,"journal":{"name":"ACS Applied Polymer Materials","volume":"224 1","pages":""},"PeriodicalIF":7.4,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11530350/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142545720","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Definition of phosphatidylinositol 4,5-bisphosphate distribution by freeze-fracture replica labeling.","authors":"Takuma Tsuji, Junya Hasegawa, Takehiko Sasaki, Toyoshi Fujimoto","doi":"10.1083/jcb.202311067","DOIUrl":"10.1083/jcb.202311067","url":null,"abstract":"<p><p>Phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P2] is a phospholipid essential for plasma membrane functions, but its two-dimensional distribution is not clear. Here, we compared the result of sodium dodecyl sulfate-treated freeze-fracture replica labeling (SDS-FRL) of quick-frozen cells with the actual PtdIns(4,5)P2 content and the results obtained by fluorescence biosensor and by labeling of chemically-fixed membranes. In yeast, enrichment of PtdIns(4,5)P2 in the membrane compartment of Can1 (MCC)/eisosome, especially in the curved MCC/eisosome, was evident by SDS-FRL, but not by fluorescence biosensor, GFP-PLC1δ-PH. PtdIns(4,5)P2 remaining after acute ATP depletion and in the stationary phase, 30.0% and 56.6% of the control level, respectively, was not detectable by fluorescence biosensor, whereas the label intensity by SDS-FRL reflected the PtdIns(4,5)P2 amount. In PC12 cells, PtdIns(4,5)P2 was observed in a punctate pattern in the formaldehyde-fixed plasma membrane, whereas it was distributed randomly by SDS-FRL and showed clustering after formaldehyde fixation. The results indicate that the distribution of PtdIns(4,5)P2 can be defined most reliably by SDS-FRL of quick-frozen cells.</p>","PeriodicalId":7,"journal":{"name":"ACS Applied Polymer Materials","volume":"224 1","pages":""},"PeriodicalIF":7.4,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11535894/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142568691","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Comprehensive comparative analysis and development of molecular markers for Lasianthus species based on complete chloroplast genome sequences","authors":"Yue Zhang, Meifang Song, Deying Tang, Xianjing Li, Niaojiao Xu, Haitao Li, Lu Qu, Yunqiang Wang, Cuiyun Yin, Lixia Zhang, Zhonglian Zhang","doi":"10.1186/s12870-024-05383-z","DOIUrl":"https://doi.org/10.1186/s12870-024-05383-z","url":null,"abstract":"Lasianthus species are widely used in traditional Chinese folk medicine with high medicinal value. However, source materials and herbarium specimens are often misidentified due to morphological characteristics and commonly used DNA barcode fragments are not sufficient for accurately identifying Lasianthus species. To improve the molecular methods for distinguishing among Lasianthus species, we report the complete chloroplast (CP) genomes of Lasianthus attenuatus, Lasianthus henryi, Lasianthus hookeri, Lasianthus sikkimensis, obtained via high-throughput Illumina sequencing. These showed CP genomes size of 160164-160246 bp and a typical quadripartite structure, including a large single-copy region (86675–86848 bp), a small single-copy region (17177–17326 bp), and a pair of inverted repeats (28089–28135 bp). As a whole, the gene order, GC content and IR/SC boundary structure were remarkably similar among of the four Lasianthus CP genomes, the partial gene length and IR, LSC and SSC regions length are still different. The average GC content of the CP genomes was 36.71–36.75%, and a total of 129 genes were detected, including 83 different protein-coding genes, 8 different rRNA genes and 38 different tRNA genes. Furthermore, we compared our 4 complete CP genomes data with publicly available CP genome data from six other Lasianthus species, and we initially screened eleven highly variable region fragments were initially screened. We then evaluated the identification efficiency of eleven highly variable region fragments and 5 regular barcode fragments. Ultimately, we found that the optimal combination fragment' ITS2 + psaI-ycf4' could authenticated the Lasianthus species well. Additionally, the results of genome comparison of Rubiaceae species showed that the coding region is more conservative than the non-coding region, and the ycf1 gene shows the most significant variation. Finally, 49 species of CP genome sequences belonging to 16 genera of the Rubiaceae family were used to construct phylogenetic trees. Our research is the first to analyze the chloroplast genomes of four species of Lasianthus in detail and we ultimately determined that the combination fragment' ITS2 + psaI-ycf4' is the optimal barcode combination for identifying the genus of Lasianthus. Meanwhile, we gathered the available CP genome sequences from the Rubiaceae and used them to construct the most comprehensive phylogenetic tree for the Rubiaceae family. These investigations provide an important reference point for further studies in the species identification, genetic diversity, and phylogenetic analyses of Rubiaceae species.","PeriodicalId":4,"journal":{"name":"ACS Applied Energy Materials","volume":"27 1","pages":""},"PeriodicalIF":5.3,"publicationDate":"2024-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142263185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The ecology of ageing in wild societies: linking age structure and social behaviour.","authors":"Joe P Woodman, Samin Gokcekus, Kristina B Beck, Jonathan P Green, Dan H Nussey, Josh A Firth","doi":"10.1098/rstb.2022.0464","DOIUrl":"10.1098/rstb.2022.0464","url":null,"abstract":"<p><p>The age of individuals has consequences not only for their fitness and behaviour but also for the functioning of the groups they form. Because social behaviour often changes with age, population age structure is expected to shape the social organization, the social environments individuals experience and the operation of social processes within populations. Although research has explored changes in individual social behaviour with age, particularly in controlled settings, there is limited understanding of how age structure governs sociality in wild populations. Here, we synthesize previous research into age-related effects on social processes in natural populations, and discuss the links between age structure, sociality and ecology, specifically focusing on how population age structure might influence social structure and functioning. We highlight the potential for using empirical data from natural populations in combination with social network approaches to uncover pathways linking individual social ageing, population age structure and societal functioning. We discuss the broader implications of these insights for understanding the social impacts of anthropogenic effects on animal population demography and for building a deeper understanding of societal ageing in general.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20220464"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11513650/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505471","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Ageing effects of social environments in 'non-social' insects.","authors":"Lauren M Harrison, Emily R Churchill, Megan Fairweather, Claire H Smithson, Tracey Chapman, Amanda Bretman","doi":"10.1098/rstb.2022.0463","DOIUrl":"10.1098/rstb.2022.0463","url":null,"abstract":"<p><p>It is increasingly clear that social environments have profound impacts on the life histories of 'non-social' animals. However, it is not yet well known how species with varying degrees of sociality respond to different social contexts and whether such effects are sex-specific. To survey the extent to which social environments specifically affect lifespan and ageing in non-social species, we performed a systematic literature review, focusing on invertebrates but excluding eusocial insects. We found 80 studies in which lifespan or ageing parameters were measured in relation to changes in same-sex or opposite-sex exposure, group size or cues thereof. Most of the studies focused on manipulations of adults, often reporting sex differences in lifespan following exposure to the opposite sex. Some studies highlighted the impacts of developmental environments or social partner age on lifespan. Several studies explored potential underlying mechanisms, emphasizing that studies on insects could provide excellent opportunities to interrogate the basis of social effects on ageing. We discuss what these studies can tell us about the social environment as a stressor, or trade-offs in resources prompted by different social contexts. We suggest fruitful avenues for further research of social effects across a wider and more diverse range of taxa.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20220463"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11513649/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505560","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Early life adversity has sex-dependent effects on survival across the lifespan in rhesus macaques.","authors":"Sam K Patterson, Ella Andonov, Alyssa M Arre, Melween I Martínez, Josué E Negron-Del Valle, Rachel M Petersen, Daniel Phillips, Ahaylee Rahman, Angelina Ruiz-Lambides, Isabella Villanueva, Amanda J Lea, Noah Snyder-Mackler, Lauren J N Brent, James P Higham","doi":"10.1098/rstb.2022.0456","DOIUrl":"10.1098/rstb.2022.0456","url":null,"abstract":"<p><p>Exposure to early life adversity is linked to detrimental fitness outcomes across taxa. Owing to the challenges of collecting longitudinal data, direct evidence for long-term fitness effects of early life adversity from long-lived species remains relatively scarce. Here, we test the effects of early life adversity on male and female longevity in a free-ranging population of rhesus macaques (<i>Macaca mulatta</i>) on Cayo Santiago, Puerto Rico. We leveraged six decades of data to quantify the relative importance of 10 forms of early life adversity for 6599 macaques. Individuals that experienced more early life adversity died earlier than those that experienced less adversity. Mortality risk was highest during early life, defined as birth to 4 years old, but heightened mortality risk was also present in macaques that survived to adulthood. Females and males were affected differently by some forms of adversity, and these differences might be driven by varying energetic demands and dispersal patterns. Our results show that the fitness consequences of early life adversity are not uniform across individuals but vary as a function of the type of adversity, timing and social context, and thus contribute to our limited but growing understanding of the evolution of early life sensitivities.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20220456"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11513645/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505563","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Linking energy availability, movement and sociality in a wild primate (<i>Papio ursinus</i>).","authors":"Ines Fürtbauer, Chloe Shergold, Charlotte Christensen, Anna M Bracken, Michael Heistermann, Marina Papadopoulou, M Justin O'Riain, Andrew J King","doi":"10.1098/rstb.2022.0466","DOIUrl":"10.1098/rstb.2022.0466","url":null,"abstract":"<p><p>Proximate mechanisms of 'social ageing', i.e. shifts in social activity and narrowing of social networks, are understudied. It is proposed that energetic deficiencies (which are often seen in older individuals) may restrict movement and, in turn, sociality, but empirical tests of these intermediary mechanisms are lacking. Here, we study wild chacma baboons (<i>Papio ursinus</i>), combining measures of faecal triiodothyronine (fT3), a non-invasive proxy for energy availability, high-resolution GPS data (movement and social proximity) and accelerometry (social grooming durations). Higher (individual mean-centred) fT3 was associated with increased residency time (i.e. remaining in the same area longer), which, in turn, was positively related to social opportunities (i.e. close physical proximity). Individuals with more frequent social opportunities received more grooming, whereas for grooming given, fT3 moderated this effect, suggesting an energetic cost of giving grooming. While our results support the spirit of the energetic deficiencies hypothesis, the directionality of the relationship between energy availability and movement is unexpected and suggests that lower-energy individuals may use strategies to reduce the costs of intermittent locomotion. Thus, future work should consider whether age-related declines in sociality may be a by-product of a strategy to conserve energy.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20220466"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11513646/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"More social species live longer, have longer generation times and longer reproductive windows.","authors":"Roberto Salguero-Gómez","doi":"10.1098/rstb.2022.0459","DOIUrl":"10.1098/rstb.2022.0459","url":null,"abstract":"<p><p>The role of sociality in the demography of animals has become an intense focus of research in recent decades. However, efforts to understand the sociality-demography nexus have hitherto focused on single species or isolated taxonomic groups. Consequently, we lack generality regarding how sociality associates with demographic traits within the Animal Kingdom. Here, I propose a continuum of sociality, from solitary to tightly social, and test whether this continuum correlates with the key demographic properties of 152 species, from jellyfish to humans. After correction for body mass and phylogenetic relationships, I show that the sociality continuum is associated with key life history traits: more social species live longer, postpone maturity, have longer generation time and greater probability of achieving reproduction than solitary, gregarious, communal or colonial species. Contrary to the social buffering hypothesis, sociality does not result in more buffered populations. While more social species have a lower ability to benefit from disturbances, they display greater resistance than more solitary species. Finally, I also show that sociality does not shape reproductive or actuarial senescence rates. This cross-taxonomic examination of sociality across the demography of 13 taxonomic classes highlights key ways in which individual interactions shape most aspects of animal demography.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20220459"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11513647/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The life history of harvester ant colonies.","authors":"Deborah M Gordon","doi":"10.1098/rstb.2023.0332","DOIUrl":"10.1098/rstb.2023.0332","url":null,"abstract":"<p><p>A long-term study of a population of desert seed-eating ant colonies of the red harvester ant, <i>Pogonomyrmex barbatus</i>, in New Mexico, USA, shows that a colony can live for 20-30 years-the lifespan of its founding queen. A colony's collective behaviour shifts in the course of its life history. These changes, generated by social interactions within the colony, adjust the behaviour of the colony as it grows older and larger, in response to its environment and neighbouring colonies. A worker lives only a year and performs different tasks as it ages, in response to interactions with other workers and the local surroundings. A colony's behaviour changes-becoming more stable and consistent-as the colony grows older, with more ants to participate in social interactions. A neighbourhood of colonies, often of similar age, grows old together. Colonies differ in how they regulate foraging behaviour collectively to manage water loss. These differences influence how foragers of neighbouring colonies partition foraging area. In a harsh but stable environment, the gradual behavioural shifts over a colony's lifespan allow it to adjust to slow changes in the composition of its neighbourhood and in environmental conditions.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20230332"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11528356/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505472","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The concept of critical age group for density dependence: bridging the gap between demographers, evolutionary biologists and behavioural ecologists.","authors":"Marlène Gamelon, Yimen G Araya-Ajoy, Bernt-Erik Sæther","doi":"10.1098/rstb.2022.0457","DOIUrl":"10.1098/rstb.2022.0457","url":null,"abstract":"<p><p>Density dependence plays an important role in population regulation in the wild. It involves a decrease in population growth rate when the population size increases. Fifty years ago, Charlesworth introduced the concept of 'critical age group', denoting the age classes in which variation in the number of individuals most strongly contributes to density regulation. Since this pioneering work, this concept has rarely been used. In light of Charlesworth's concept, we discuss the need to develop work between behavioural ecology, demography and evolutionary biology to better understand the mechanisms acting in density-regulated age-structured populations. We highlight demographic studies that explored age-specific contributions to density dependence and discuss the underlying evolutionary processes. Understanding competitive interactions among individuals is pivotal to identify the ages contributing most strongly to density regulation, highlighting the need to move towards behavioural ecology to decipher mechanisms acting in density-regulated age-structured populations. Because individual characteristics other than age can be linked to competitive abilities, expanding the concept of critical age to other structures (e.g. sex, dominance rank) offers interesting perspectives. Linking research fields based on the concept of the critical age group is key to move from a pattern-oriented view of density regulation to a process-oriented approach.This article is part of the discussion meeting issue 'Understanding age and society using natural populations'.</p>","PeriodicalId":5,"journal":{"name":"ACS Applied Materials & Interfaces","volume":"379 1916","pages":"20220457"},"PeriodicalIF":5.4,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11528359/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142505470","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}