{"title":"海洋来源链霉菌sp. SCSIO 68065产生的含肉桂酰肽Q-V的发现和生物合成","authors":"Zeping Chen, Sihui Bian, Zhenye Yang, Xiaoyi Wei, Qinglian Li, Changli Sun, Zhuo Shang, Jianhua Ju, Shaobin Fu, Junying Ma","doi":"10.1021/acs.jnatprod.5c00991","DOIUrl":null,"url":null,"abstract":"<p><p>Guided by comprehensive bioinformatic analysis and global molecular networking, four previously undescribed peptidic natural products, pepticinnamins Q-T (<b>1</b>-<b>4</b>), along with two known analogues (<b>5</b>, <b>6</b>), were isolated from cultures of the marine-derived <i>Streptomyces</i> sp. SCSIO 68065. Heterologous expression of the <i>pcn</i> biosynthetic gene cluster in the engineered chassis strain <i>Streptomyces atratus</i> ZH16NSEPK enabled the production of pepticinnamin analogues and led to the targeted isolation of two undescribed biosynthetic intermediates, pepticinnamins U and V (<b>7</b>, <b>8</b>), as well as the known compound pepticinnamin M (<b>9</b>). The structures of these compounds were elucidated by spectroscopic analyses (including 1D and 2D NMR), HRESIMS, time-dependent density functional theory electronic circular dichroism (TDDFT-ECD) calculations, single-crystal X-ray diffraction studies, and advanced Marfey's method. Pepticinnamins Q-S (<b>1</b>-<b>3</b>) and U (<b>7</b>) are characterized by an unusual epoxidized cinnamoyl moiety. Comparative genomic analysis with homologous gene clusters allowed the proposal of their plausible biosynthetic pathways. Moreover, the cytochrome P450 monooxygenase Pcn29 was experimentally confirmed to catalyze the key epoxidation of the cinnamoyl moiety through a combination of targeted gene deletion and <i>in vitro</i> enzymatic reconstitution studies.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":" ","pages":""},"PeriodicalIF":3.6000,"publicationDate":"2025-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Discovery and Biosynthesis of Cinnamoyl-Containing Pepticinnamins Q-V Produced by the Marine-Derived <i>Streptomyces</i> sp. SCSIO 68065.\",\"authors\":\"Zeping Chen, Sihui Bian, Zhenye Yang, Xiaoyi Wei, Qinglian Li, Changli Sun, Zhuo Shang, Jianhua Ju, Shaobin Fu, Junying Ma\",\"doi\":\"10.1021/acs.jnatprod.5c00991\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Guided by comprehensive bioinformatic analysis and global molecular networking, four previously undescribed peptidic natural products, pepticinnamins Q-T (<b>1</b>-<b>4</b>), along with two known analogues (<b>5</b>, <b>6</b>), were isolated from cultures of the marine-derived <i>Streptomyces</i> sp. SCSIO 68065. Heterologous expression of the <i>pcn</i> biosynthetic gene cluster in the engineered chassis strain <i>Streptomyces atratus</i> ZH16NSEPK enabled the production of pepticinnamin analogues and led to the targeted isolation of two undescribed biosynthetic intermediates, pepticinnamins U and V (<b>7</b>, <b>8</b>), as well as the known compound pepticinnamin M (<b>9</b>). The structures of these compounds were elucidated by spectroscopic analyses (including 1D and 2D NMR), HRESIMS, time-dependent density functional theory electronic circular dichroism (TDDFT-ECD) calculations, single-crystal X-ray diffraction studies, and advanced Marfey's method. Pepticinnamins Q-S (<b>1</b>-<b>3</b>) and U (<b>7</b>) are characterized by an unusual epoxidized cinnamoyl moiety. Comparative genomic analysis with homologous gene clusters allowed the proposal of their plausible biosynthetic pathways. Moreover, the cytochrome P450 monooxygenase Pcn29 was experimentally confirmed to catalyze the key epoxidation of the cinnamoyl moiety through a combination of targeted gene deletion and <i>in vitro</i> enzymatic reconstitution studies.</p>\",\"PeriodicalId\":47,\"journal\":{\"name\":\"Journal of Natural Products \",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2025-10-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Natural Products \",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jnatprod.5c00991\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Natural Products ","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1021/acs.jnatprod.5c00991","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Discovery and Biosynthesis of Cinnamoyl-Containing Pepticinnamins Q-V Produced by the Marine-Derived Streptomyces sp. SCSIO 68065.
Guided by comprehensive bioinformatic analysis and global molecular networking, four previously undescribed peptidic natural products, pepticinnamins Q-T (1-4), along with two known analogues (5, 6), were isolated from cultures of the marine-derived Streptomyces sp. SCSIO 68065. Heterologous expression of the pcn biosynthetic gene cluster in the engineered chassis strain Streptomyces atratus ZH16NSEPK enabled the production of pepticinnamin analogues and led to the targeted isolation of two undescribed biosynthetic intermediates, pepticinnamins U and V (7, 8), as well as the known compound pepticinnamin M (9). The structures of these compounds were elucidated by spectroscopic analyses (including 1D and 2D NMR), HRESIMS, time-dependent density functional theory electronic circular dichroism (TDDFT-ECD) calculations, single-crystal X-ray diffraction studies, and advanced Marfey's method. Pepticinnamins Q-S (1-3) and U (7) are characterized by an unusual epoxidized cinnamoyl moiety. Comparative genomic analysis with homologous gene clusters allowed the proposal of their plausible biosynthetic pathways. Moreover, the cytochrome P450 monooxygenase Pcn29 was experimentally confirmed to catalyze the key epoxidation of the cinnamoyl moiety through a combination of targeted gene deletion and in vitro enzymatic reconstitution studies.
期刊介绍:
The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
When new compounds are reported, manuscripts describing their biological activity are much preferred.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.