海洋来源链霉菌sp. SCSIO 68065产生的含肉桂酰肽Q-V的发现和生物合成

IF 3.6 2区 生物学 Q2 CHEMISTRY, MEDICINAL
Zeping Chen, Sihui Bian, Zhenye Yang, Xiaoyi Wei, Qinglian Li, Changli Sun, Zhuo Shang, Jianhua Ju, Shaobin Fu, Junying Ma
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引用次数: 0

摘要

在综合生物信息学分析和全球分子网络的指导下,从海洋来源链霉菌SCSIO 68065的培养物中分离出四种先前未描述的肽类天然产物,pepticinnamins Q-T(1-4)和两种已知的类似物(5,6)。pcn生物合成基因簇在工程基质菌株Streptomyces atratus ZH16NSEPK中的异源表达使pepticinnamin类似物得以产生,并导致两种未描述的生物合成中间体,pepticinnamins U和V(7,8),以及已知的化合物pepticinnamin M(9)的靶向分离。这些化合物的结构通过光谱分析(包括1D和2D NMR)、hremsims、随时间密度泛函理论电子圆二色性(TDDFT-ECD)计算、单晶x射线衍射研究和先进的Marfey方法进行了阐明。肽氨基Q-S(1-3)和U(7)具有不寻常的环氧化肉桂基片段。与同源基因簇的比较基因组分析允许提出其合理的生物合成途径。此外,通过靶向基因缺失和体外酶重组研究,实验证实细胞色素P450单加氧酶Pcn29可以催化肉桂基片段的关键环氧化。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Discovery and Biosynthesis of Cinnamoyl-Containing Pepticinnamins Q-V Produced by the Marine-Derived Streptomyces sp. SCSIO 68065.

Guided by comprehensive bioinformatic analysis and global molecular networking, four previously undescribed peptidic natural products, pepticinnamins Q-T (1-4), along with two known analogues (5, 6), were isolated from cultures of the marine-derived Streptomyces sp. SCSIO 68065. Heterologous expression of the pcn biosynthetic gene cluster in the engineered chassis strain Streptomyces atratus ZH16NSEPK enabled the production of pepticinnamin analogues and led to the targeted isolation of two undescribed biosynthetic intermediates, pepticinnamins U and V (7, 8), as well as the known compound pepticinnamin M (9). The structures of these compounds were elucidated by spectroscopic analyses (including 1D and 2D NMR), HRESIMS, time-dependent density functional theory electronic circular dichroism (TDDFT-ECD) calculations, single-crystal X-ray diffraction studies, and advanced Marfey's method. Pepticinnamins Q-S (1-3) and U (7) are characterized by an unusual epoxidized cinnamoyl moiety. Comparative genomic analysis with homologous gene clusters allowed the proposal of their plausible biosynthetic pathways. Moreover, the cytochrome P450 monooxygenase Pcn29 was experimentally confirmed to catalyze the key epoxidation of the cinnamoyl moiety through a combination of targeted gene deletion and in vitro enzymatic reconstitution studies.

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来源期刊
CiteScore
9.10
自引率
5.90%
发文量
294
审稿时长
2.3 months
期刊介绍: The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained. Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin. When new compounds are reported, manuscripts describing their biological activity are much preferred. Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
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