基于dft的几丁质-壳聚糖过渡研究:n-乙酰化对结构和反应性的影响

IF 3.1 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Rodolfo Daniel Ávila-Avilés
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引用次数: 0

摘要

几丁质衍生聚合物中去乙酰化的程度和模式决定了它们的物理化学性质和功能潜力。本研究利用密度泛函理论(DFT)、静电表面作图、非共价相互作用(NCI)分析和全局反应性描述符,对具有系统不同程度脱乙酰化(DDA)的十聚体几丁质类链进行了全面的理论分析。结构优化表明,部分去乙酰化引起显著的扭转重排和增强链内氢键,从而增加构象灵活性。分子静电电位(MEP)表面表现出从中性、乙酰基为主的拓扑结构向高度极化和反应性富胺结构域的转变。NCI分析证实了协同氢键和范德华网络在中程DDA结构中的出现。此外,HOMO-LUMO分析和taff衍生的描述子鉴定出20% ([[GlcNac]4- GlcN]2) - 60% ([[GlcN]3-[GlcNac]2]2) DDA链具有电子软质、高度极化、双电子给电子和双电子接受能力。这些发现表明,部分去乙酰化的壳聚糖链具有柔韧性、反应性和内部凝聚力的独特组合,为其在生物医学和功能材料中的卓越性能提供了分子基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A DFT-based investigation of chitin-to-chitosan transition: effects of N-acetylation on structure and reactivity

A DFT-based investigation of chitin-to-chitosan transition: effects of N-acetylation on structure and reactivity

The degree and pattern of deacetylation in chitin-derived polymers critically determine their physicochemical properties and functional potential. In this study, a comprehensive theoretical analysis is performed of decameric chitin-like chains with systematically varied degrees of deacetylation (DDA), using density functional theory (DFT), electrostatic surface mapping, noncovalent interaction (NCI) analysis, and global reactivity descriptors. Structural optimizations revealed that partial deacetylation induces significant torsional rearrangements and enhanced intra-chain hydrogen bonding, leading to increased conformational flexibility. Molecular electrostatic potential (MEP) surfaces demonstrated a transition from neutral, acetyl-dominated topologies to highly polarized and reactive amine-rich domains. NCI analysis confirmed the emergence of cooperative hydrogen bonding and van der Waals networks in mid-range DDA structures. Furthermore, HOMO–LUMO analysis and TAFF-derived descriptors identified 20% ([[GlcNac]4- GlcN]2)–60% ([[GlcN]3-[GlcNac]2]2) DDA chains as electronically soft, highly polarizable, and capable of dual electron donation and acceptance. These findings suggest that partially deacetylated chitosan chains exhibit a unique combination of flexibility, reactivity, and internal cohesion, providing a molecular rationale for their superior performance in biomedical and functional materials applications.

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来源期刊
Journal of Computer-Aided Molecular Design
Journal of Computer-Aided Molecular Design 生物-计算机:跨学科应用
CiteScore
8.00
自引率
8.60%
发文量
56
审稿时长
3 months
期刊介绍: The Journal of Computer-Aided Molecular Design provides a form for disseminating information on both the theory and the application of computer-based methods in the analysis and design of molecules. The scope of the journal encompasses papers which report new and original research and applications in the following areas: - theoretical chemistry; - computational chemistry; - computer and molecular graphics; - molecular modeling; - protein engineering; - drug design; - expert systems; - general structure-property relationships; - molecular dynamics; - chemical database development and usage.
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