通过等变局部表示和电荷平衡学习非局部分子相互作用

IF 11.9 1区 材料科学 Q1 CHEMISTRY, PHYSICAL
Paul Fuchs, Michał Sanocki, Julija Zavadlav
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引用次数: 0

摘要

依赖于化学局部性的图神经网络(GNN)势在显著降低计算成本的情况下提供了接近量子力学的精度。消息传递gnn通过在邻近粒子之间传播局部信息,同时保持有效的局部性,来模拟其直接邻域之外的相互作用。然而,局部性排除了对许多现实世界系统至关重要的远程效应的建模,例如电荷转移、静电相互作用和色散效应。在这项工作中,我们提出了远程相互作用的电荷平衡层(CELLI)来解决有效建模非局部相互作用的挑战。这种新结构将经典电荷平衡(Qeq)方法推广到现代等变GNN势的模型不可知构建块。因此,CELLI扩展了gnn的能力来模拟远程相互作用,同时通过显式建模的电荷提供高可解释性。在基准系统上,CELLI在严格的局部模型上取得了最先进的结果。CELLI推广到不同的数据集和大型结构,同时提供高计算效率和稳健的预测。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Learning non-local molecular interactions via equivariant local representations and charge equilibration

Learning non-local molecular interactions via equivariant local representations and charge equilibration

Graph Neural Network (GNN) potentials relying on chemical locality offer near-quantum mechanical accuracy at significantly reduced computational costs. Message-passing GNNs model interactions beyond their immediate neighborhood by propagating local information between neighboring particles while remaining effectively local. However, locality precludes modeling long-range effects critical to many real-world systems, such as charge transfer, electrostatic interactions, and dispersion effects. In this work, we propose the Charge Equilibration Layer for Long-range Interactions (CELLI) to address the challenge of efficiently modeling non-local interactions. This novel architecture generalizes the classical charge equilibration (Qeq) method to a model-agnostic building block for modern equivariant GNN potentials. Therefore, CELLI extends the capability of GNNs to model long-range interactions while providing high interpretability through explicitly modeled charges. On benchmark systems, CELLI achieves state-of-the-art results for strictly local models. CELLI generalizes to diverse datasets and large structures while providing high computational efficiency and robust predictions.

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来源期刊
npj Computational Materials
npj Computational Materials Mathematics-Modeling and Simulation
CiteScore
15.30
自引率
5.20%
发文量
229
审稿时长
6 weeks
期刊介绍: npj Computational Materials is a high-quality open access journal from Nature Research that publishes research papers applying computational approaches for the design of new materials and enhancing our understanding of existing ones. The journal also welcomes papers on new computational techniques and the refinement of current approaches that support these aims, as well as experimental papers that complement computational findings. Some key features of npj Computational Materials include a 2-year impact factor of 12.241 (2021), article downloads of 1,138,590 (2021), and a fast turnaround time of 11 days from submission to the first editorial decision. The journal is indexed in various databases and services, including Chemical Abstracts Service (ACS), Astrophysics Data System (ADS), Current Contents/Physical, Chemical and Earth Sciences, Journal Citation Reports/Science Edition, SCOPUS, EI Compendex, INSPEC, Google Scholar, SCImago, DOAJ, CNKI, and Science Citation Index Expanded (SCIE), among others.
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